Strain Fitness in Pantoea sp. MT58 around IAI47_06745

Experiment: Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
1,405,282	+		IAI47_06740	0.40	-0.2
1,405,283	-		IAI47_06740	0.40	-0.5
1,405,284	+		IAI47_06740	0.40	+0.1
1,405,356	+		IAI47_06740	0.45	-2.1
1,405,356	+		IAI47_06740	0.45	+0.8
1,405,356	+		IAI47_06740	0.45	+2.0
1,405,357	-		IAI47_06740	0.45	+0.5
1,405,390	-		IAI47_06740	0.47	-1.2
1,405,390	-		IAI47_06740	0.47	-1.1
1,405,397	+		IAI47_06740	0.48	+2.4
1,405,401	+		IAI47_06740	0.48	+0.7
1,405,401	+		IAI47_06740	0.48	-0.6
1,405,401	+		IAI47_06740	0.48	-1.0
1,405,402	-		IAI47_06740	0.48	-1.2
1,405,402	-		IAI47_06740	0.48	-3.0
1,405,443	+		IAI47_06740	0.51	-0.9
1,405,443	+		IAI47_06740	0.51	+0.4
1,405,443	+		IAI47_06740	0.51	+0.5
1,405,444	-		IAI47_06740	0.51	+0.4
1,405,444	-		IAI47_06740	0.51	-2.2
1,405,444	-		IAI47_06740	0.51	-1.9
1,405,578	+		IAI47_06740	0.60	+0.3
1,405,579	-		IAI47_06740	0.60	+1.5
1,405,579	-		IAI47_06740	0.60	-1.6
1,405,632	+		IAI47_06740	0.63	-1.3
1,405,633	-		IAI47_06740	0.63	+0.2
1,405,644	+		IAI47_06740	0.64	+0.2
1,405,644	+		IAI47_06740	0.64	-1.5
1,405,644	+		IAI47_06740	0.64	+2.4
1,405,645	-		IAI47_06740	0.64	+0.3
1,405,654	-		IAI47_06740	0.64	-0.3
1,405,656	+		IAI47_06740	0.65	+1.3
1,405,656	+		IAI47_06740	0.65	-1.7
1,405,657	-		IAI47_06740	0.65	+0.3
1,405,725	+		IAI47_06740	0.69	+1.1
1,405,729	+		IAI47_06740	0.69	-0.9
1,405,729	+		IAI47_06740	0.69	-0.6
1,405,729	+		IAI47_06740	0.69	+0.3
1,405,729	+		IAI47_06740	0.69	+0.3
1,405,729	+		IAI47_06740	0.69	+0.8
1,405,729	+		IAI47_06740	0.69	-0.3
1,405,729	+		IAI47_06740	0.69	-0.8
1,405,729	+		IAI47_06740	0.69	+2.5
1,405,730	-		IAI47_06740	0.69	-0.4
1,405,730	-		IAI47_06740	0.69	-0.5
1,405,730	-		IAI47_06740	0.69	-0.3
1,405,730	-		IAI47_06740	0.69	+2.2
1,405,730	-		IAI47_06740	0.69	-2.2
1,405,736	-		IAI47_06740	0.70	+2.3
1,405,762	-		IAI47_06740	0.72	+1.8
1,405,809	+		IAI47_06740	0.75	-0.8
1,405,809	+		IAI47_06740	0.75	+0.3
1,405,810	-		IAI47_06740	0.75	-0.2
1,405,848	+		IAI47_06740	0.77	+0.1
1,405,876	-		IAI47_06740	0.79	+0.2
1,405,876	-		IAI47_06740	0.79	-0.2
1,405,935	-		IAI47_06740	0.83	-0.4
1,406,052	+				+0.2
1,406,052	+				+1.5
1,406,053	-				-1.0
1,406,053	-				-0.1
1,406,053	-				+0.1
1,406,053	-				-0.3
1,406,053	-				-0.2
1,406,055	+				+2.7
1,406,055	+				+1.5
1,406,055	+				-0.3
1,406,056	-				-0.9
1,406,056	-				+1.9
1,406,056	-				-0.5
1,406,081	+				-0.4
1,406,097	+				+1.9
1,406,098	-				+0.3
1,406,098	-				+1.7
1,406,113	-				-0.2
1,406,113	-				-1.0
1,406,123	+				+0.4
1,406,123	+				-0.6
1,406,124	-				-0.0
1,406,132	+				-0.6
1,406,133	-				-0.8
1,406,133	-				-0.4
1,406,133	-				+1.6
1,406,139	+				+2.1
1,406,175	-				-0.2
1,406,183	+				-1.0
1,406,184	-				-0.9
1,406,191	+				+1.8
1,406,191	+				-0.1
1,406,192	-				+0.7
1,406,210	-				+0.4
1,406,242	-				+0.9
1,406,267	+				+0.1
1,406,267	+				-1.2
1,406,267	+				+1.7
1,406,268	-				+1.0
1,406,283	+				+0.7
1,406,283	+				+1.7
1,406,283	+				+0.1
1,406,283	+				+1.1
1,406,284	-				+0.4
1,406,294	-				+0.6
1,406,296	+				+0.1
1,406,296	+				-0.9
1,406,296	+				+2.0
1,406,296	+				-2.3
1,406,296	+				+1.5
1,406,296	+				+1.6
1,406,297	-				+0.6
1,406,297	-				+1.8
1,406,297	-				+0.3
1,406,299	+				-0.7
1,406,299	+				-1.9
1,406,323	-		IAI47_06745	0.11	-0.7
1,406,341	+		IAI47_06745	0.13	-1.0
1,406,341	+		IAI47_06745	0.13	-0.2
1,406,341	+		IAI47_06745	0.13	-0.8
1,406,345	-		IAI47_06745	0.13	-1.8
1,406,345	-		IAI47_06745	0.13	+1.7
1,406,345	-		IAI47_06745	0.13	-1.6
1,406,372	-		IAI47_06745	0.16	-1.4
1,406,372	-		IAI47_06745	0.16	+1.6
1,406,374	+		IAI47_06745	0.16	-1.1
1,406,374	+		IAI47_06745	0.16	+0.4
1,406,375	-		IAI47_06745	0.16	+1.1
1,406,413	+		IAI47_06745	0.20	-0.5
1,406,413	+		IAI47_06745	0.20	-0.4
1,406,413	+		IAI47_06745	0.20	-0.9
1,406,486	-		IAI47_06745	0.27	-0.7
1,406,536	+		IAI47_06745	0.32	-1.7
1,406,537	-		IAI47_06745	0.32	-1.3
1,406,590	+		IAI47_06745	0.37	-1.4
1,406,590	+		IAI47_06745	0.37	-1.2
1,406,591	-		IAI47_06745	0.37	-0.7
1,406,591	-		IAI47_06745	0.37	+2.8
1,406,597	+		IAI47_06745	0.38	+1.4
1,406,597	+		IAI47_06745	0.38	-0.3
1,406,598	-		IAI47_06745	0.38	-1.1
1,406,598	-		IAI47_06745	0.38	-1.8
1,406,607	+		IAI47_06745	0.39	+1.2
1,406,607	+		IAI47_06745	0.39	+1.3
1,406,617	+		IAI47_06745	0.40	-0.4
1,406,617	+		IAI47_06745	0.40	-1.5
1,406,618	-		IAI47_06745	0.40	-1.1
1,406,648	+		IAI47_06745	0.43	+0.4
1,406,648	+		IAI47_06745	0.43	-0.0
1,406,649	-		IAI47_06745	0.43	-3.2
1,406,649	-		IAI47_06745	0.43	-1.2
1,406,653	+		IAI47_06745	0.44	-0.2
1,406,666	+		IAI47_06745	0.45	+1.6
1,406,666	+		IAI47_06745	0.45	-0.5
1,406,666	+		IAI47_06745	0.45	-0.9
1,406,666	+		IAI47_06745	0.45	-1.3
1,406,666	+		IAI47_06745	0.45	-1.9
1,406,667	-		IAI47_06745	0.45	-0.3
1,406,669	+		IAI47_06745	0.45	+1.3
1,406,669	+		IAI47_06745	0.45	+1.5
1,406,669	+		IAI47_06745	0.45	-0.7
1,406,669	+		IAI47_06745	0.45	-1.6
1,406,669	+		IAI47_06745	0.45	+1.0
1,406,670	-		IAI47_06745	0.45	+0.6
1,406,670	-		IAI47_06745	0.45	-0.6
1,406,777	+		IAI47_06745	0.56	-1.4
1,406,777	+		IAI47_06745	0.56	+1.6
1,406,777	+		IAI47_06745	0.56	-0.3
1,406,778	-		IAI47_06745	0.56	+1.4
1,406,778	-		IAI47_06745	0.56	-1.3
1,406,778	-		IAI47_06745	0.56	+0.3
1,406,778	-		IAI47_06745	0.56	-0.2
1,406,778	-		IAI47_06745	0.56	-0.1
1,406,915	+		IAI47_06745	0.69	+0.7
1,406,915	+		IAI47_06745	0.69	+1.2
1,406,915	+		IAI47_06745	0.69	-0.1
1,406,915	+		IAI47_06745	0.69	+0.2
1,406,915	+		IAI47_06745	0.69	+0.8
1,406,915	+		IAI47_06745	0.69	-1.1
1,406,916	-		IAI47_06745	0.70	-0.6
1,406,916	-		IAI47_06745	0.70	-0.3
1,406,931	+		IAI47_06745	0.71	+0.2
1,406,931	+		IAI47_06745	0.71	+1.2
1,406,932	-		IAI47_06745	0.71	+0.3
1,406,932	-		IAI47_06745	0.71	+1.1
1,406,932	-		IAI47_06745	0.71	+1.1
1,406,932	-		IAI47_06745	0.71	-1.0
1,406,936	+		IAI47_06745	0.72	+2.3
1,406,936	+		IAI47_06745	0.72	+2.2
1,406,936	+		IAI47_06745	0.72	-0.2
1,406,937	-		IAI47_06745	0.72	-2.1
1,406,937	-		IAI47_06745	0.72	-0.8
1,406,968	+		IAI47_06745	0.75	+0.6
1,406,968	+		IAI47_06745	0.75	-0.5
1,406,998	+		IAI47_06745	0.78	-1.8
1,406,998	+		IAI47_06745	0.78	-0.1
1,406,998	+		IAI47_06745	0.78	-1.0
1,406,999	-		IAI47_06745	0.78	-0.9
1,406,999	-		IAI47_06745	0.78	-1.9
1,406,999	-		IAI47_06745	0.78	+0.1
1,406,999	-		IAI47_06745	0.78	-0.3
1,406,999	-		IAI47_06745	0.78	-0.9
1,407,002	+		IAI47_06745	0.78	-0.1
1,407,002	+		IAI47_06745	0.78	-0.7
1,407,002	+		IAI47_06745	0.78	+2.5
1,407,002	+		IAI47_06745	0.78	-1.5
1,407,002	+		IAI47_06745	0.78	-2.2
1,407,002	+		IAI47_06745	0.78	+0.8
1,407,003	-		IAI47_06745	0.78	-0.4
1,407,003	-		IAI47_06745	0.78	-0.9
1,407,003	-		IAI47_06745	0.78	-1.5
1,407,003	-		IAI47_06745	0.78	-1.1
1,407,003	-		IAI47_06745	0.78	+0.1
1,407,069	+		IAI47_06745	0.85	+1.3
1,407,069	+		IAI47_06745	0.85	+0.8
1,407,090	+		IAI47_06745	0.87	+1.4
1,407,090	+		IAI47_06745	0.87	-1.8
1,407,090	+		IAI47_06745	0.87	-0.5
1,407,091	-		IAI47_06745	0.87	-0.8
1,407,091	-		IAI47_06745	0.87	-1.4
1,407,091	-		IAI47_06745	0.87	+0.4
1,407,113	+		IAI47_06745	0.89	-1.6
1,407,113	+		IAI47_06745	0.89	-0.8
1,407,113	+		IAI47_06745	0.89	-0.0
1,407,114	-		IAI47_06745	0.89	-0.4
1,407,114	-		IAI47_06745	0.89	-0.7
1,407,125	+				+0.5
1,407,125	+				-0.7
1,407,125	+				+2.4
1,407,125	+				+0.2
1,407,125	+				+0.9
1,407,125	+				+1.7
1,407,125	+				+1.0
1,407,126	-				+2.1
1,407,126	-				-1.1
1,407,126	-				+0.7
1,407,127	+				-0.4
1,407,152	+				+0.9
1,407,153	-				+1.6
1,407,153	-				-1.0
1,407,153	-				-0.6
1,407,160	+				+0.4
1,407,161	-				-1.4
1,407,175	+				-1.4
1,407,175	+				+0.7
1,407,175	+				+0.5
1,407,175	+				+0.9
1,407,175	+				-0.0
1,407,175	+				-1.7
1,407,176	-				+1.4
1,407,176	-				+2.4
1,407,176	-				-0.9
1,407,176	-				-0.1
1,407,176	-				+0.6
1,407,206	+				-0.9
1,407,207	-				-0.5
1,407,215	-				-0.7
1,407,215	-				+0.7
1,407,221	+				-0.1
1,407,221	+				-0.1
1,407,221	+				+2.7
1,407,222	-				+0.4
1,407,222	-				-0.0
1,407,222	-				+1.7
1,407,293	+				-1.1
1,407,293	+				-2.5
1,407,374	+				+2.8
1,407,374	+				+0.7
1,407,374	+				+0.9
1,407,374	+				-1.7
1,407,374	+				-0.9
1,407,375	-				-0.8
1,407,375	-				+0.5
1,407,375	-				-1.2
1,407,396	+				+0.5
1,407,396	+				+0.3
1,407,396	+				+3.0
1,407,560	-				-0.2
1,407,560	-				-0.2
1,407,560	-				-0.3
1,407,591	+				-0.9
1,407,591	+				-0.2
1,407,592	-				+2.6
1,407,592	-				+0.4
1,407,592	-				+0.3
1,407,592	-				-0.5
1,407,592	-				+0.5
1,407,620	+				-0.1
1,407,620	+				+0.8
1,407,620	+				-1.2
1,407,621	-				-1.4
1,407,643	+				+1.4
1,407,643	+				+0.7
1,407,721	+				-0.2
1,407,721	+				-0.8
1,407,722	-				-0.0
1,407,751	-		IAI47_06750	0.12	+0.4
1,407,761	+		IAI47_06750	0.13	-0.3
1,407,762	-		IAI47_06750	0.13	-0.6
1,407,765	+		IAI47_06750	0.14	-1.1
1,407,766	-		IAI47_06750	0.14	+0.5
1,407,766	-		IAI47_06750	0.14	-1.0
1,407,777	+		IAI47_06750	0.15	+0.5
1,407,777	+		IAI47_06750	0.15	+0.6
1,407,778	-		IAI47_06750	0.16	-1.3
1,407,778	-		IAI47_06750	0.16	-0.5
1,407,886	+		IAI47_06750	0.31	-1.0
1,407,886	+		IAI47_06750	0.31	+1.4
1,407,887	-		IAI47_06750	0.31	+1.1
1,407,887	-		IAI47_06750	0.31	-0.3
1,407,903	-		IAI47_06750	0.33	+2.0
1,407,912	+		IAI47_06750	0.34	+0.8
1,407,913	-		IAI47_06750	0.34	-0.8
1,407,921	-		IAI47_06750	0.35	-0.6
1,407,921	-		IAI47_06750	0.35	-0.6
1,407,956	+		IAI47_06750	0.40	-1.4
1,407,956	+		IAI47_06750	0.40	+0.7
1,407,957	-		IAI47_06750	0.40	-0.5
1,407,959	+		IAI47_06750	0.41	+0.8
1,407,960	-		IAI47_06750	0.41	+0.8
1,407,960	-		IAI47_06750	0.41	-2.3
1,407,960	-		IAI47_06750	0.41	+1.3
1,407,974	+		IAI47_06750	0.43	-0.3
1,407,974	+		IAI47_06750	0.43	-0.9
1,407,975	-		IAI47_06750	0.43	+3.0
1,407,986	+		IAI47_06750	0.44	-0.2
1,407,986	+		IAI47_06750	0.44	-0.9
1,407,986	+		IAI47_06750	0.44	-1.9
1,407,987	-		IAI47_06750	0.45	+0.9
1,407,987	-		IAI47_06750	0.45	-1.8
1,408,027	+		IAI47_06750	0.50	-1.5
1,408,097	+		IAI47_06750	0.60	-0.0
1,408,097	+		IAI47_06750	0.60	+2.3
1,408,097	+		IAI47_06750	0.60	-1.5
1,408,097	+		IAI47_06750	0.60	+1.3
1,408,098	-		IAI47_06750	0.60	-2.3
1,408,098	-		IAI47_06750	0.60	+0.0
1,408,098	-		IAI47_06750	0.60	-0.5
1,408,098	-		IAI47_06750	0.60	-1.0
1,408,100	-		IAI47_06750	0.60	+0.6
1,408,100	-		IAI47_06750	0.60	+2.5
1,408,135	+		IAI47_06750	0.65	+1.7
1,408,135	+		IAI47_06750	0.65	-0.4
1,408,136	-		IAI47_06750	0.65	+0.7
1,408,136	-		IAI47_06750	0.65	-0.4
1,408,157	-		IAI47_06750	0.68	+0.2
1,408,157	-		IAI47_06750	0.68	-0.6
1,408,189	+		IAI47_06750	0.73	-0.3
1,408,189	+		IAI47_06750	0.73	-0.4
1,408,189	+		IAI47_06750	0.73	+1.4
1,408,189	+		IAI47_06750	0.73	+1.6
1,408,189	+		IAI47_06750	0.73	-0.2
1,408,189	+		IAI47_06750	0.73	-0.7
1,408,189	+		IAI47_06750	0.73	+2.1
1,408,189	+		IAI47_06750	0.73	-2.4
1,408,190	-		IAI47_06750	0.73	+1.9
1,408,190	-		IAI47_06750	0.73	+1.3
1,408,190	-		IAI47_06750	0.73	+0.6
1,408,190	-		IAI47_06750	0.73	-1.0
1,408,190	-		IAI47_06750	0.73	-0.2
1,408,190	-		IAI47_06750	0.73	+0.5
1,408,190	-		IAI47_06750	0.73	+0.3
1,408,190	-		IAI47_06750	0.73	+1.6
1,408,193	-		IAI47_06750	0.73	+0.5
1,408,193	-		IAI47_06750	0.73	+1.7
1,408,193	-		IAI47_06750	0.73	+0.5
1,408,216	+		IAI47_06750	0.76	-0.8
1,408,219	+		IAI47_06750	0.77	-0.5
1,408,219	+		IAI47_06750	0.77	-1.5
1,408,219	+		IAI47_06750	0.77	-1.3
1,408,220	-		IAI47_06750	0.77	+0.2
1,408,220	-		IAI47_06750	0.77	-0.1