Strain Fitness in Pantoea sp. MT58 around IAI47_06700

Experiment: Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
1,394,904	-				-1.0
1,394,904	-				+1.1
1,394,942	+				+1.3
1,394,943	-				+0.2
1,394,943	-				+0.2
1,394,945	+				+3.9
1,394,946	-				-1.5
1,394,946	-				+2.0
1,394,946	-				-0.3
1,394,968	+				+1.0
1,394,968	+				+0.6
1,394,968	+				-0.9
1,394,968	+				-0.4
1,394,968	+				+3.5
1,394,968	+				+1.1
1,394,969	-				-0.3
1,394,969	-				-1.0
1,394,969	-				-1.4
1,394,969	-				+0.3
1,394,969	-				+3.0
1,394,969	-				-0.1
1,394,970	+				-0.7
1,394,970	+				+1.2
1,394,970	+				-0.2
1,394,970	+				+0.3
1,394,971	-				+1.0
1,394,971	-				-0.2
1,394,991	+				+1.4
1,394,992	-				+0.2
1,395,022	+				-0.0
1,395,022	+				-1.1
1,395,022	+				+0.9
1,395,022	+				-0.4
1,395,022	+				+0.5
1,395,023	-				+0.7
1,395,070	+		IAI47_06695	0.12	+0.4
1,395,101	-		IAI47_06695	0.16	-1.8
1,395,136	+		IAI47_06695	0.21	+2.0
1,395,137	-		IAI47_06695	0.21	+0.5
1,395,161	-		IAI47_06695	0.24	-1.2
1,395,210	+		IAI47_06695	0.30	-0.6
1,395,210	+		IAI47_06695	0.30	+0.5
1,395,211	-		IAI47_06695	0.30	+1.6
1,395,211	-		IAI47_06695	0.30	+1.5
1,395,211	-		IAI47_06695	0.30	-1.5
1,395,211	-		IAI47_06695	0.30	+1.1
1,395,211	-		IAI47_06695	0.30	+0.7
1,395,215	+		IAI47_06695	0.31	-1.5
1,395,215	+		IAI47_06695	0.31	+1.5
1,395,268	+		IAI47_06695	0.38	+1.0
1,395,269	-		IAI47_06695	0.38	-1.2
1,395,427	-		IAI47_06695	0.58	-1.1
1,395,486	-		IAI47_06695	0.65	-0.3
1,395,486	-		IAI47_06695	0.65	+0.9
1,395,604	+		IAI47_06695	0.80	-2.1
1,395,604	+		IAI47_06695	0.80	+0.9
1,395,604	+		IAI47_06695	0.80	+0.7
1,395,604	+		IAI47_06695	0.80	+3.1
1,395,604	+		IAI47_06695	0.80	-0.2
1,395,605	-		IAI47_06695	0.80	+0.7
1,395,605	-		IAI47_06695	0.80	+0.9
1,395,650	-		IAI47_06695	0.86	+0.7
1,395,650	-		IAI47_06695	0.86	+1.3
1,395,650	-		IAI47_06695	0.86	-1.7
1,395,658	+		IAI47_06695	0.87	+1.4
1,395,674	+		IAI47_06695	0.89	-1.5
1,395,691	+				+2.2
1,395,691	+				+1.1
1,395,753	+				-0.4
1,395,753	+				+0.3
1,395,754	-				+2.9
1,395,770	+				-0.6
1,395,771	-				+0.3
1,395,790	+				+1.3
1,395,860	+				-1.4
1,395,860	+				+0.7
1,395,861	-				+0.5
1,395,888	+				+0.0
1,395,889	-				-0.2
1,395,901	+				+1.1
1,395,902	-				-0.5
1,395,906	-				+0.6
1,395,960	+				-1.2
1,395,960	+				-0.3
1,395,960	+				+0.4
1,395,968	+				-1.9
1,395,968	+				-2.1
1,395,968	+				+2.2
1,395,968	+				-1.4
1,395,968	+				+0.4
1,395,968	+				+1.3
1,395,968	+				-0.5
1,395,968	+				-0.9
1,395,968	+				-2.1
1,395,968	+				+0.4
1,395,968	+				+2.3
1,395,969	-				-1.7
1,395,969	-				+3.0
1,395,969	-				-0.3
1,395,969	-				+0.4
1,395,969	-				+0.0
1,395,969	-				-0.2
1,395,972	+				-0.9
1,395,972	+				+0.6
1,395,972	+				-1.7
1,395,972	+				-0.1
1,395,972	+				+0.4
1,395,972	+				-2.4
1,395,972	+				-1.0
1,395,972	+				+0.1
1,395,972	+				-0.8
1,395,972	+				-0.2
1,395,972	+				-1.0
1,395,972	+				-0.1
1,395,972	+				-0.1
1,395,972	+				-1.4
1,395,972	+				+1.2
1,395,973	-				+0.5
1,395,973	-				-0.0
1,395,973	-				-0.4
1,395,973	-				+1.0
1,395,973	-				+0.3
1,395,973	-				+1.3
1,395,973	-				+0.9
1,395,973	-				-2.4
1,395,973	-				+2.0
1,395,973	-				-0.7
1,395,980	+				+1.1
1,395,993	+		IAI47_06700	0.11	-1.7
1,395,993	+		IAI47_06700	0.11	-1.5
1,396,037	-		IAI47_06700	0.16	-0.9
1,396,142	+		IAI47_06700	0.28	-2.8
1,396,142	+		IAI47_06700	0.28	+0.4
1,396,142	+		IAI47_06700	0.28	+0.4
1,396,143	-		IAI47_06700	0.28	+0.5
1,396,175	+		IAI47_06700	0.32	-1.2
1,396,176	-		IAI47_06700	0.32	-1.2
1,396,176	-		IAI47_06700	0.32	+0.0
1,396,176	-		IAI47_06700	0.32	-0.4
1,396,176	-		IAI47_06700	0.32	+0.3
1,396,299	+		IAI47_06700	0.47	+1.5
1,396,300	-		IAI47_06700	0.47	-0.8
1,396,300	-		IAI47_06700	0.47	-1.5
1,396,342	-		IAI47_06700	0.52	-0.9
1,396,361	-		IAI47_06700	0.54	+0.0
1,396,361	-		IAI47_06700	0.54	-0.5
1,396,361	-		IAI47_06700	0.54	-0.8
1,396,361	-		IAI47_06700	0.54	+0.2
1,396,376	+		IAI47_06700	0.56	+1.7
1,396,377	-		IAI47_06700	0.56	-1.3
1,396,427	+		IAI47_06700	0.62	-0.7
1,396,428	-		IAI47_06700	0.62	+1.6
1,396,454	+		IAI47_06700	0.65	-0.2
1,396,455	-		IAI47_06700	0.65	+0.7
1,396,455	-		IAI47_06700	0.65	-1.3
1,396,455	-		IAI47_06700	0.65	-0.6
1,396,503	+		IAI47_06700	0.71	+0.2
1,396,504	-		IAI47_06700	0.71	-0.5
1,396,504	-		IAI47_06700	0.71	+0.0
1,396,637	+		IAI47_06700	0.87	-0.5
1,396,637	+		IAI47_06700	0.87	-1.6
1,396,637	+		IAI47_06700	0.87	+1.0
1,396,637	+		IAI47_06700	0.87	-0.7
1,396,637	+		IAI47_06700	0.87	-0.7
1,396,637	+		IAI47_06700	0.87	-1.0
1,396,637	+		IAI47_06700	0.87	-1.4
1,396,638	-		IAI47_06700	0.87	+0.7
1,396,638	-		IAI47_06700	0.87	+1.5
1,396,638	-		IAI47_06700	0.87	-0.6
1,396,638	-		IAI47_06700	0.87	-2.0
1,396,644	+		IAI47_06700	0.88	-0.1
1,396,644	+		IAI47_06700	0.88	-0.9
1,396,644	+		IAI47_06700	0.88	-1.8
1,396,644	+		IAI47_06700	0.88	-0.5
1,396,644	+		IAI47_06700	0.88	+0.0
1,396,645	-		IAI47_06700	0.88	+2.4
1,396,710	+				+0.7
1,396,711	-				+0.9
1,396,711	-				+1.2
1,396,726	+				-0.9
1,396,726	+				-0.5
1,396,726	+				-1.8
1,396,727	-				-1.5
1,396,727	-				+0.8
1,396,727	-				+0.6
1,396,760	+				-1.8
1,396,760	+				-1.3
1,396,761	-				-0.2
1,396,761	-				+0.8
1,396,761	-				-0.9
1,396,761	-				-0.8
1,396,761	-				-0.8
1,396,767	+				+3.5
1,396,767	+				-0.8
1,396,767	+				+0.7
1,396,767	+				+1.3
1,396,886	+		IAI47_06705	0.11	-2.2
1,396,887	-		IAI47_06705	0.11	+0.8
1,396,924	+		IAI47_06705	0.15	-0.9
1,396,924	+		IAI47_06705	0.15	+0.4
1,396,924	+		IAI47_06705	0.15	+0.4
1,396,925	-		IAI47_06705	0.15	+0.0
1,396,962	+		IAI47_06705	0.18	-1.5
1,396,984	-		IAI47_06705	0.20	+3.1
1,397,017	-		IAI47_06705	0.23	-1.5
1,397,068	+		IAI47_06705	0.27	+0.4
1,397,068	+		IAI47_06705	0.27	-1.7
1,397,068	+		IAI47_06705	0.27	+1.1
1,397,068	+		IAI47_06705	0.27	-0.1
1,397,068	+		IAI47_06705	0.27	-2.4
1,397,068	+		IAI47_06705	0.27	+1.3
1,397,068	+		IAI47_06705	0.27	+1.0
1,397,069	-		IAI47_06705	0.28	+0.8
1,397,069	-		IAI47_06705	0.28	+0.1
1,397,069	-		IAI47_06705	0.28	+0.4
1,397,069	-		IAI47_06705	0.28	-1.5
1,397,079	+		IAI47_06705	0.28	+0.8
1,397,080	-		IAI47_06705	0.29	+1.4
1,397,085	+		IAI47_06705	0.29	-2.7
1,397,086	-		IAI47_06705	0.29	-0.6
1,397,086	-		IAI47_06705	0.29	-0.2
1,397,086	-		IAI47_06705	0.29	-1.2
1,397,086	-		IAI47_06705	0.29	+1.7
1,397,153	+		IAI47_06705	0.35	+0.7
1,397,154	-		IAI47_06705	0.35	+2.3
1,397,190	+		IAI47_06705	0.38	-0.4
1,397,190	+		IAI47_06705	0.38	-0.2
1,397,235	+		IAI47_06705	0.42	+1.1
1,397,235	+		IAI47_06705	0.42	-0.4
1,397,236	-		IAI47_06705	0.42	+0.9
1,397,444	+		IAI47_06705	0.61	-1.8
1,397,444	+		IAI47_06705	0.61	-1.5
1,397,445	-		IAI47_06705	0.61	+1.3
1,397,445	-		IAI47_06705	0.61	-0.2
1,397,445	-		IAI47_06705	0.61	+1.5
1,397,471	+		IAI47_06705	0.63	+1.8
1,397,471	+		IAI47_06705	0.63	-0.6
1,397,472	-		IAI47_06705	0.63	+0.6
1,397,472	-		IAI47_06705	0.63	-0.2
1,397,472	-		IAI47_06705	0.63	-0.0
1,397,472	-		IAI47_06705	0.63	-1.3
1,397,472	-		IAI47_06705	0.63	-0.2
1,397,565	+		IAI47_06705	0.72	-2.6
1,397,566	-		IAI47_06705	0.72	+0.1
1,397,584	+		IAI47_06705	0.73	+0.4
1,397,585	+		IAI47_06705	0.73	-0.0
1,397,585	+		IAI47_06705	0.73	+0.5
1,397,585	+		IAI47_06705	0.73	+0.1
1,397,585	+		IAI47_06705	0.73	+1.8
1,397,586	-		IAI47_06705	0.74	+0.6
1,397,586	-		IAI47_06705	0.74	+0.8
1,397,586	-		IAI47_06705	0.74	-0.4
1,397,589	+		IAI47_06705	0.74	-0.9
1,397,589	+		IAI47_06705	0.74	-1.5
1,397,589	+		IAI47_06705	0.74	-1.3
1,397,589	+		IAI47_06705	0.74	+2.4
1,397,589	+		IAI47_06705	0.74	+0.6
1,397,590	-		IAI47_06705	0.74	-1.2
1,397,590	-		IAI47_06705	0.74	-0.2
1,397,590	-		IAI47_06705	0.74	-1.3
1,397,590	-		IAI47_06705	0.74	-0.6
1,397,590	-		IAI47_06705	0.74	-1.6
1,397,590	-		IAI47_06705	0.74	+2.0
1,397,590	-		IAI47_06705	0.74	+0.5
1,397,590	-		IAI47_06705	0.74	-1.9
1,397,590	-		IAI47_06705	0.74	+0.9
1,397,590	-		IAI47_06705	0.74	-0.8
1,397,612	+		IAI47_06705	0.76	-2.2
1,397,613	-		IAI47_06705	0.76	-0.5
1,397,613	-		IAI47_06705	0.76	+2.0
1,397,613	-		IAI47_06705	0.76	+0.2
1,397,651	-		IAI47_06705	0.79	+0.0
1,397,741	+		IAI47_06705	0.87	+3.6
1,397,742	-		IAI47_06705	0.87	+0.5
1,397,742	-		IAI47_06705	0.87	+1.9