Experiment: Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI47_02815 and IAI47_02820 are separated by 4 nucleotides IAI47_02820 and IAI47_02825 are separated by 129 nucleotides IAI47_02825 and IAI47_02830 are separated by 52 nucleotides
IAI47_02815: IAI47_02815 - BglG family transcription antiterminator, at 581,408 to 583,318
_02815
IAI47_02820: IAI47_02820 - LysR family transcriptional regulator, at 583,323 to 584,222
_02820
IAI47_02825: IAI47_02825 - pirin family protein, at 584,352 to 585,056
_02825
IAI47_02830: IAI47_02830 - divisome-associated lipoprotein YraP, at 585,109 to 585,681
_02830
Position (kb) 583
584
585 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 582.329 kb on + strand, within IAI47_02815 at 582.329 kb on + strand, within IAI47_02815 at 582.329 kb on + strand, within IAI47_02815 at 582.329 kb on + strand, within IAI47_02815 at 582.329 kb on + strand, within IAI47_02815 at 582.330 kb on - strand, within IAI47_02815 at 582.330 kb on - strand, within IAI47_02815 at 582.330 kb on - strand, within IAI47_02815 at 582.330 kb on - strand, within IAI47_02815 at 582.376 kb on + strand, within IAI47_02815 at 582.376 kb on + strand, within IAI47_02815 at 582.411 kb on - strand, within IAI47_02815 at 582.428 kb on - strand, within IAI47_02815 at 582.458 kb on + strand, within IAI47_02815 at 582.470 kb on + strand, within IAI47_02815 at 582.470 kb on + strand, within IAI47_02815 at 582.470 kb on + strand, within IAI47_02815 at 582.470 kb on + strand, within IAI47_02815 at 582.470 kb on + strand, within IAI47_02815 at 582.470 kb on + strand, within IAI47_02815 at 582.470 kb on + strand, within IAI47_02815 at 582.470 kb on + strand, within IAI47_02815 at 582.470 kb on + strand, within IAI47_02815 at 582.470 kb on + strand, within IAI47_02815 at 582.471 kb on - strand, within IAI47_02815 at 582.471 kb on - strand, within IAI47_02815 at 582.471 kb on - strand, within IAI47_02815 at 582.471 kb on - strand, within IAI47_02815 at 582.471 kb on - strand, within IAI47_02815 at 582.471 kb on - strand, within IAI47_02815 at 582.471 kb on - strand, within IAI47_02815 at 582.471 kb on - strand, within IAI47_02815 at 582.471 kb on - strand, within IAI47_02815 at 582.471 kb on - strand, within IAI47_02815 at 582.471 kb on - strand, within IAI47_02815 at 582.509 kb on + strand, within IAI47_02815 at 582.509 kb on + strand, within IAI47_02815 at 582.509 kb on + strand, within IAI47_02815 at 582.509 kb on + strand, within IAI47_02815 at 582.510 kb on - strand, within IAI47_02815 at 582.510 kb on - strand, within IAI47_02815 at 582.510 kb on - strand, within IAI47_02815 at 582.511 kb on + strand, within IAI47_02815 at 582.511 kb on + strand, within IAI47_02815 at 582.512 kb on - strand, within IAI47_02815 at 582.518 kb on + strand, within IAI47_02815 at 582.518 kb on + strand, within IAI47_02815 at 582.519 kb on - strand, within IAI47_02815 at 582.519 kb on - strand, within IAI47_02815 at 582.519 kb on - strand, within IAI47_02815 at 582.519 kb on - strand, within IAI47_02815 at 582.519 kb on - strand, within IAI47_02815 at 582.519 kb on - strand, within IAI47_02815 at 582.526 kb on + strand, within IAI47_02815 at 582.526 kb on + strand, within IAI47_02815 at 582.559 kb on + strand, within IAI47_02815 at 582.559 kb on + strand, within IAI47_02815 at 582.559 kb on + strand, within IAI47_02815 at 582.559 kb on + strand, within IAI47_02815 at 582.560 kb on - strand, within IAI47_02815 at 582.560 kb on - strand, within IAI47_02815 at 582.560 kb on - strand, within IAI47_02815 at 582.560 kb on - strand, within IAI47_02815 at 582.560 kb on - strand, within IAI47_02815 at 582.560 kb on - strand, within IAI47_02815 at 582.585 kb on - strand, within IAI47_02815 at 582.585 kb on - strand, within IAI47_02815 at 582.638 kb on - strand, within IAI47_02815 at 582.638 kb on - strand, within IAI47_02815 at 582.638 kb on - strand, within IAI47_02815 at 582.722 kb on + strand, within IAI47_02815 at 582.722 kb on + strand, within IAI47_02815 at 582.722 kb on + strand, within IAI47_02815 at 582.722 kb on + strand, within IAI47_02815 at 582.722 kb on + strand, within IAI47_02815 at 582.723 kb on - strand, within IAI47_02815 at 582.723 kb on - strand, within IAI47_02815 at 582.875 kb on + strand, within IAI47_02815 at 582.875 kb on + strand, within IAI47_02815 at 582.875 kb on + strand, within IAI47_02815 at 582.875 kb on + strand, within IAI47_02815 at 582.875 kb on + strand, within IAI47_02815 at 582.875 kb on + strand, within IAI47_02815 at 582.875 kb on + strand, within IAI47_02815 at 582.875 kb on + strand, within IAI47_02815 at 582.875 kb on + strand, within IAI47_02815 at 582.875 kb on + strand, within IAI47_02815 at 582.875 kb on + strand, within IAI47_02815 at 582.875 kb on + strand, within IAI47_02815 at 582.875 kb on + strand, within IAI47_02815 at 582.875 kb on + strand, within IAI47_02815 at 582.876 kb on - strand, within IAI47_02815 at 582.876 kb on - strand, within IAI47_02815 at 582.876 kb on - strand, within IAI47_02815 at 582.876 kb on - strand, within IAI47_02815 at 582.876 kb on - strand, within IAI47_02815 at 582.877 kb on + strand, within IAI47_02815 at 582.877 kb on + strand, within IAI47_02815 at 582.877 kb on + strand, within IAI47_02815 at 582.877 kb on + strand, within IAI47_02815 at 582.877 kb on + strand, within IAI47_02815 at 582.877 kb on + strand, within IAI47_02815 at 582.877 kb on + strand, within IAI47_02815 at 582.877 kb on + strand, within IAI47_02815 at 582.877 kb on + strand, within IAI47_02815 at 582.877 kb on + strand, within IAI47_02815 at 582.877 kb on + strand, within IAI47_02815 at 582.877 kb on + strand, within IAI47_02815 at 582.877 kb on + strand, within IAI47_02815 at 582.877 kb on + strand, within IAI47_02815 at 582.877 kb on + strand, within IAI47_02815 at 582.877 kb on + strand, within IAI47_02815 at 582.877 kb on + strand, within IAI47_02815 at 582.877 kb on + strand, within IAI47_02815 at 582.877 kb on + strand, within IAI47_02815 at 582.877 kb on + strand, within IAI47_02815 at 582.878 kb on - strand, within IAI47_02815 at 582.878 kb on - strand, within IAI47_02815 at 582.878 kb on - strand, within IAI47_02815 at 582.878 kb on - strand, within IAI47_02815 at 582.878 kb on - strand, within IAI47_02815 at 582.878 kb on - strand, within IAI47_02815 at 582.878 kb on - strand, within IAI47_02815 at 582.878 kb on - strand, within IAI47_02815 at 582.878 kb on - strand, within IAI47_02815 at 582.878 kb on - strand, within IAI47_02815 at 582.913 kb on + strand, within IAI47_02815 at 582.931 kb on - strand, within IAI47_02815 at 583.001 kb on + strand, within IAI47_02815 at 583.001 kb on + strand, within IAI47_02815 at 583.002 kb on - strand, within IAI47_02815 at 583.002 kb on - strand, within IAI47_02815 at 583.002 kb on - strand, within IAI47_02815 at 583.103 kb on + strand, within IAI47_02815 at 583.103 kb on + strand, within IAI47_02815 at 583.104 kb on - strand, within IAI47_02815 at 583.104 kb on - strand, within IAI47_02815 at 583.104 kb on - strand, within IAI47_02815 at 583.105 kb on + strand, within IAI47_02815 at 583.106 kb on - strand, within IAI47_02815 at 583.126 kb on + strand, within IAI47_02815 at 583.126 kb on + strand, within IAI47_02815 at 583.126 kb on + strand, within IAI47_02815 at 583.127 kb on - strand, within IAI47_02815 at 583.127 kb on - strand, within IAI47_02815 at 583.127 kb on - strand, within IAI47_02815 at 583.151 kb on + strand at 583.151 kb on + strand at 583.151 kb on + strand at 583.151 kb on + strand at 583.151 kb on + strand at 583.151 kb on + strand at 583.152 kb on - strand at 583.152 kb on - strand at 583.152 kb on - strand at 583.152 kb on - strand at 583.152 kb on - strand at 583.187 kb on + strand at 583.206 kb on + strand at 583.206 kb on + strand at 583.208 kb on + strand at 583.208 kb on + strand at 583.208 kb on + strand at 583.208 kb on + strand at 583.208 kb on + strand at 583.208 kb on + strand at 583.208 kb on + strand at 583.208 kb on + strand at 583.208 kb on + strand at 583.208 kb on + strand at 583.208 kb on + strand at 583.208 kb on + strand at 583.208 kb on + strand at 583.208 kb on + strand at 583.209 kb on - strand at 583.209 kb on - strand at 583.209 kb on - strand at 583.209 kb on - strand at 583.209 kb on - strand at 583.209 kb on - strand at 583.209 kb on - strand at 583.209 kb on - strand at 583.209 kb on - strand at 583.316 kb on + strand at 583.317 kb on - strand at 583.325 kb on - strand at 583.406 kb on + strand at 583.407 kb on - strand at 583.407 kb on - strand at 583.409 kb on + strand at 583.409 kb on + strand at 583.409 kb on + strand at 583.409 kb on + strand at 583.409 kb on + strand at 583.410 kb on - strand at 583.410 kb on - strand at 583.410 kb on - strand at 583.410 kb on - strand at 583.410 kb on - strand at 583.410 kb on - strand at 583.410 kb on - strand at 583.410 kb on - strand at 583.410 kb on - strand at 583.412 kb on + strand at 583.412 kb on + strand at 583.412 kb on + strand at 583.412 kb on + strand at 583.413 kb on - strand, within IAI47_02820 at 583.413 kb on - strand, within IAI47_02820 at 583.429 kb on + strand, within IAI47_02820 at 583.429 kb on + strand, within IAI47_02820 at 583.430 kb on - strand, within IAI47_02820 at 583.449 kb on + strand, within IAI47_02820 at 583.486 kb on + strand, within IAI47_02820 at 583.486 kb on + strand, within IAI47_02820 at 583.486 kb on + strand, within IAI47_02820 at 583.486 kb on + strand, within IAI47_02820 at 583.486 kb on + strand, within IAI47_02820 at 583.532 kb on + strand, within IAI47_02820 at 583.533 kb on - strand, within IAI47_02820 at 583.533 kb on - strand, within IAI47_02820 at 583.533 kb on - strand, within IAI47_02820 at 583.548 kb on + strand, within IAI47_02820 at 583.548 kb on + strand, within IAI47_02820 at 583.549 kb on - strand, within IAI47_02820 at 583.549 kb on - strand, within IAI47_02820 at 583.549 kb on - strand, within IAI47_02820 at 583.549 kb on - strand, within IAI47_02820 at 583.576 kb on - strand, within IAI47_02820 at 583.610 kb on + strand, within IAI47_02820 at 583.610 kb on + strand, within IAI47_02820 at 583.702 kb on + strand, within IAI47_02820 at 583.703 kb on - strand, within IAI47_02820 at 583.703 kb on - strand, within IAI47_02820 at 583.703 kb on - strand, within IAI47_02820 at 583.720 kb on + strand, within IAI47_02820 at 583.720 kb on + strand, within IAI47_02820 at 583.720 kb on + strand, within IAI47_02820 at 583.720 kb on + strand, within IAI47_02820 at 583.720 kb on + strand, within IAI47_02820 at 583.720 kb on + strand, within IAI47_02820 at 583.721 kb on - strand, within IAI47_02820 at 583.721 kb on - strand, within IAI47_02820 at 583.721 kb on - strand, within IAI47_02820 at 583.721 kb on - strand, within IAI47_02820 at 583.728 kb on - strand, within IAI47_02820 at 583.734 kb on - strand, within IAI47_02820 at 583.824 kb on + strand, within IAI47_02820 at 583.824 kb on + strand, within IAI47_02820 at 583.850 kb on + strand, within IAI47_02820 at 583.851 kb on - strand, within IAI47_02820 at 583.851 kb on - strand, within IAI47_02820 at 583.851 kb on - strand, within IAI47_02820 at 583.916 kb on + strand, within IAI47_02820 at 584.033 kb on + strand, within IAI47_02820 at 584.033 kb on + strand, within IAI47_02820 at 584.034 kb on - strand, within IAI47_02820 at 584.039 kb on + strand, within IAI47_02820 at 584.039 kb on + strand, within IAI47_02820 at 584.040 kb on - strand, within IAI47_02820 at 584.064 kb on + strand, within IAI47_02820 at 584.064 kb on + strand, within IAI47_02820 at 584.064 kb on + strand, within IAI47_02820 at 584.065 kb on - strand, within IAI47_02820 at 584.065 kb on - strand, within IAI47_02820 at 584.065 kb on - strand, within IAI47_02820 at 584.065 kb on - strand, within IAI47_02820 at 584.065 kb on - strand, within IAI47_02820 at 584.065 kb on - strand, within IAI47_02820 at 584.065 kb on - strand, within IAI47_02820 at 584.104 kb on + strand, within IAI47_02820 at 584.104 kb on + strand, within IAI47_02820 at 584.104 kb on + strand, within IAI47_02820 at 584.104 kb on + strand, within IAI47_02820 at 584.105 kb on - strand, within IAI47_02820 at 584.105 kb on - strand, within IAI47_02820 at 584.105 kb on - strand, within IAI47_02820 at 584.105 kb on - strand, within IAI47_02820 at 584.105 kb on - strand, within IAI47_02820 at 584.105 kb on - strand, within IAI47_02820 at 584.105 kb on - strand, within IAI47_02820 at 584.105 kb on - strand, within IAI47_02820 at 584.105 kb on - strand, within IAI47_02820 at 584.105 kb on - strand, within IAI47_02820 at 584.105 kb on - strand, within IAI47_02820 at 584.105 kb on - strand, within IAI47_02820 at 584.180 kb on + strand at 584.263 kb on + strand at 584.263 kb on + strand at 584.263 kb on + strand at 584.264 kb on - strand at 584.264 kb on - strand at 584.264 kb on - strand at 584.264 kb on - strand at 584.271 kb on + strand at 584.294 kb on + strand at 584.294 kb on + strand at 584.294 kb on + strand at 584.294 kb on + strand at 584.295 kb on - strand at 584.295 kb on - strand at 584.295 kb on - strand at 584.295 kb on - strand at 584.307 kb on + strand at 584.307 kb on + strand at 584.307 kb on + strand at 584.308 kb on - strand at 584.308 kb on - strand at 584.346 kb on + strand at 584.350 kb on + strand at 584.350 kb on + strand at 584.350 kb on + strand at 584.350 kb on + strand at 584.350 kb on + strand at 584.350 kb on + strand at 584.350 kb on + strand at 584.350 kb on + strand at 584.351 kb on - strand at 584.351 kb on - strand at 584.351 kb on - strand at 584.351 kb on - strand at 584.351 kb on - strand at 584.351 kb on - strand at 584.351 kb on - strand at 584.356 kb on + strand at 584.356 kb on + strand at 584.415 kb on + strand at 584.415 kb on + strand at 584.416 kb on - strand at 584.416 kb on - strand at 584.416 kb on - strand at 584.436 kb on + strand, within IAI47_02825 at 584.436 kb on + strand, within IAI47_02825 at 584.436 kb on + strand, within IAI47_02825 at 584.437 kb on - strand, within IAI47_02825 at 584.437 kb on - strand, within IAI47_02825 at 584.460 kb on + strand, within IAI47_02825 at 584.461 kb on - strand, within IAI47_02825 at 584.491 kb on + strand, within IAI47_02825 at 584.491 kb on + strand, within IAI47_02825 at 584.492 kb on - strand, within IAI47_02825 at 584.492 kb on - strand, within IAI47_02825 at 584.492 kb on - strand, within IAI47_02825 at 584.492 kb on - strand, within IAI47_02825 at 584.522 kb on + strand, within IAI47_02825 at 584.522 kb on + strand, within IAI47_02825 at 584.522 kb on + strand, within IAI47_02825 at 584.522 kb on + strand, within IAI47_02825 at 584.523 kb on - strand, within IAI47_02825 at 584.523 kb on - strand, within IAI47_02825 at 584.523 kb on - strand, within IAI47_02825 at 584.526 kb on + strand, within IAI47_02825 at 584.526 kb on + strand, within IAI47_02825 at 584.526 kb on + strand, within IAI47_02825 at 584.527 kb on - strand, within IAI47_02825 at 584.527 kb on - strand, within IAI47_02825 at 584.574 kb on + strand, within IAI47_02825 at 584.648 kb on - strand, within IAI47_02825 at 584.652 kb on + strand, within IAI47_02825 at 584.653 kb on - strand, within IAI47_02825 at 584.653 kb on - strand, within IAI47_02825 at 584.653 kb on - strand, within IAI47_02825 at 584.664 kb on - strand, within IAI47_02825 at 584.664 kb on - strand, within IAI47_02825 at 584.693 kb on + strand, within IAI47_02825 at 584.693 kb on + strand, within IAI47_02825 at 584.693 kb on + strand, within IAI47_02825 at 584.693 kb on + strand, within IAI47_02825 at 584.693 kb on + strand, within IAI47_02825 at 584.693 kb on + strand, within IAI47_02825 at 584.693 kb on + strand, within IAI47_02825 at 584.693 kb on + strand, within IAI47_02825 at 584.693 kb on + strand, within IAI47_02825 at 584.693 kb on + strand, within IAI47_02825 at 584.694 kb on - strand, within IAI47_02825 at 584.694 kb on - strand, within IAI47_02825 at 584.694 kb on - strand, within IAI47_02825 at 584.694 kb on - strand, within IAI47_02825 at 584.694 kb on - strand, within IAI47_02825 at 584.694 kb on - strand, within IAI47_02825 at 584.694 kb on - strand, within IAI47_02825 at 584.694 kb on - strand, within IAI47_02825 at 584.694 kb on - strand, within IAI47_02825 at 584.701 kb on + strand, within IAI47_02825 at 584.701 kb on + strand, within IAI47_02825 at 584.701 kb on + strand, within IAI47_02825 at 584.701 kb on + strand, within IAI47_02825 at 584.701 kb on + strand, within IAI47_02825 at 584.701 kb on + strand, within IAI47_02825 at 584.701 kb on + strand, within IAI47_02825 at 584.701 kb on + strand, within IAI47_02825 at 584.702 kb on - strand, within IAI47_02825 at 584.702 kb on - strand, within IAI47_02825 at 584.702 kb on - strand, within IAI47_02825 at 584.702 kb on - strand, within IAI47_02825 at 584.702 kb on - strand, within IAI47_02825 at 584.702 kb on - strand, within IAI47_02825 at 584.702 kb on - strand, within IAI47_02825 at 584.702 kb on - strand, within IAI47_02825 at 584.781 kb on - strand, within IAI47_02825 at 584.781 kb on - strand, within IAI47_02825 at 584.800 kb on + strand, within IAI47_02825 at 584.800 kb on + strand, within IAI47_02825 at 584.800 kb on + strand, within IAI47_02825 at 584.801 kb on - strand, within IAI47_02825 at 584.898 kb on + strand, within IAI47_02825 at 584.898 kb on + strand, within IAI47_02825 at 584.899 kb on - strand, within IAI47_02825 at 584.899 kb on - strand, within IAI47_02825 at 584.899 kb on - strand, within IAI47_02825 at 584.899 kb on - strand, within IAI47_02825 at 585.044 kb on + strand at 585.045 kb on - strand at 585.045 kb on - strand at 585.045 kb on - strand at 585.068 kb on + strand at 585.069 kb on - strand at 585.103 kb on - strand at 585.103 kb on - strand at 585.103 kb on - strand at 585.110 kb on + strand at 585.110 kb on + strand at 585.110 kb on + strand at 585.111 kb on - strand at 585.111 kb on - strand at 585.111 kb on - strand at 585.123 kb on + strand at 585.123 kb on + strand at 585.123 kb on + strand at 585.123 kb on + strand at 585.123 kb on + strand at 585.123 kb on + strand at 585.123 kb on + strand at 585.124 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 remove 582,329 + IAI47_02815 0.48 +1.9 582,329 + IAI47_02815 0.48 -2.4 582,329 + IAI47_02815 0.48 +0.6 582,329 + IAI47_02815 0.48 +0.2 582,329 + IAI47_02815 0.48 -1.1 582,330 - IAI47_02815 0.48 -0.7 582,330 - IAI47_02815 0.48 +0.5 582,330 - IAI47_02815 0.48 -0.3 582,330 - IAI47_02815 0.48 +0.8 582,376 + IAI47_02815 0.51 +0.0 582,376 + IAI47_02815 0.51 +0.2 582,411 - IAI47_02815 0.52 -1.4 582,428 - IAI47_02815 0.53 +1.2 582,458 + IAI47_02815 0.55 -1.1 582,470 + IAI47_02815 0.56 +0.3 582,470 + IAI47_02815 0.56 -0.1 582,470 + IAI47_02815 0.56 +2.0 582,470 + IAI47_02815 0.56 -2.4 582,470 + IAI47_02815 0.56 -2.7 582,470 + IAI47_02815 0.56 -1.0 582,470 + IAI47_02815 0.56 -1.0 582,470 + IAI47_02815 0.56 +1.4 582,470 + IAI47_02815 0.56 +1.7 582,470 + IAI47_02815 0.56 -0.4 582,471 - IAI47_02815 0.56 +1.7 582,471 - IAI47_02815 0.56 -0.8 582,471 - IAI47_02815 0.56 -0.7 582,471 - IAI47_02815 0.56 -1.1 582,471 - IAI47_02815 0.56 -0.7 582,471 - IAI47_02815 0.56 -0.8 582,471 - IAI47_02815 0.56 -0.6 582,471 - IAI47_02815 0.56 +0.8 582,471 - IAI47_02815 0.56 +1.4 582,471 - IAI47_02815 0.56 -0.8 582,471 - IAI47_02815 0.56 -1.6 582,509 + IAI47_02815 0.58 -0.9 582,509 + IAI47_02815 0.58 +1.4 582,509 + IAI47_02815 0.58 +1.4 582,509 + IAI47_02815 0.58 +0.3 582,510 - IAI47_02815 0.58 +0.8 582,510 - IAI47_02815 0.58 +1.4 582,510 - IAI47_02815 0.58 -0.9 582,511 + IAI47_02815 0.58 +1.1 582,511 + IAI47_02815 0.58 -1.7 582,512 - IAI47_02815 0.58 -1.3 582,518 + IAI47_02815 0.58 -0.4 582,518 + IAI47_02815 0.58 +0.6 582,519 - IAI47_02815 0.58 +1.9 582,519 - IAI47_02815 0.58 -0.8 582,519 - IAI47_02815 0.58 +1.0 582,519 - IAI47_02815 0.58 +0.0 582,519 - IAI47_02815 0.58 -0.1 582,519 - IAI47_02815 0.58 +0.3 582,526 + IAI47_02815 0.59 -0.3 582,526 + IAI47_02815 0.59 +0.5 582,559 + IAI47_02815 0.60 -0.5 582,559 + IAI47_02815 0.60 +0.4 582,559 + IAI47_02815 0.60 -1.1 582,559 + IAI47_02815 0.60 -0.5 582,560 - 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Or see this region's nucleotide sequence