Strain Fitness in Pantoea sp. MT58 around IAI47_00665

Experiment: Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
142,267	+		IAI47_00660	0.18	-3.0
142,267	+		IAI47_00660	0.18	-3.7
142,267	+		IAI47_00660	0.18	-2.3
142,267	+		IAI47_00660	0.18	-2.9
142,268	-		IAI47_00660	0.18	-0.5
142,268	-		IAI47_00660	0.18	+0.2
142,322	-		IAI47_00660	0.23	-1.0
142,322	-		IAI47_00660	0.23	-1.4
142,418	-		IAI47_00660	0.32	-0.4
142,418	-		IAI47_00660	0.32	-0.4
142,445	-		IAI47_00660	0.34	-0.4
142,459	+		IAI47_00660	0.36	-1.7
142,459	+		IAI47_00660	0.36	-3.7
142,459	+		IAI47_00660	0.36	-2.6
142,459	+		IAI47_00660	0.36	-1.1
142,460	-		IAI47_00660	0.36	-1.3
142,460	-		IAI47_00660	0.36	+0.0
142,460	-		IAI47_00660	0.36	+1.4
142,531	+		IAI47_00660	0.42	-1.9
142,532	-		IAI47_00660	0.42	-0.7
142,532	-		IAI47_00660	0.42	-0.4
142,532	-		IAI47_00660	0.42	-2.0
142,532	-		IAI47_00660	0.42	-0.4
142,532	-		IAI47_00660	0.42	+0.5
142,532	-		IAI47_00660	0.42	+1.2
142,532	-		IAI47_00660	0.42	-0.9
142,564	+		IAI47_00660	0.45	-2.7
142,565	-		IAI47_00660	0.45	-0.8
142,565	-		IAI47_00660	0.45	-2.0
142,565	-		IAI47_00660	0.45	-2.9
142,565	-		IAI47_00660	0.45	-2.4
142,565	-		IAI47_00660	0.45	-0.7
142,565	-		IAI47_00660	0.45	-0.8
142,565	-		IAI47_00660	0.45	+0.7
142,565	-		IAI47_00660	0.45	-0.4
142,566	+		IAI47_00660	0.45	-2.1
142,566	+		IAI47_00660	0.45	-2.5
142,567	-		IAI47_00660	0.46	-2.1
142,567	-		IAI47_00660	0.46	-0.7
142,567	-		IAI47_00660	0.46	+1.2
142,567	-		IAI47_00660	0.46	-1.4
142,567	-		IAI47_00660	0.46	-2.0
142,567	-		IAI47_00660	0.46	-0.5
142,567	-		IAI47_00660	0.46	+0.4
142,567	-		IAI47_00660	0.46	-1.3
142,567	-		IAI47_00660	0.46	-2.1
142,567	-		IAI47_00660	0.46	-1.7
142,567	-		IAI47_00660	0.46	-0.2
142,567	-		IAI47_00660	0.46	+0.4
142,567	-		IAI47_00660	0.46	+1.2
142,567	-		IAI47_00660	0.46	-0.6
142,629	+		IAI47_00660	0.51	-2.0
142,629	+		IAI47_00660	0.51	-4.0
142,629	+		IAI47_00660	0.51	-2.8
142,630	-		IAI47_00660	0.51	-0.6
142,630	-		IAI47_00660	0.51	-1.8
142,652	-		IAI47_00660	0.53	-0.7
142,661	-		IAI47_00660	0.54	-0.8
142,661	-		IAI47_00660	0.54	-1.6
142,687	+		IAI47_00660	0.57	-3.5
142,687	+		IAI47_00660	0.57	-4.6
142,687	+		IAI47_00660	0.57	-2.4
142,687	+		IAI47_00660	0.57	-2.8
142,687	+		IAI47_00660	0.57	-2.9
142,687	+		IAI47_00660	0.57	-2.9
142,688	-		IAI47_00660	0.57	+1.2
142,688	-		IAI47_00660	0.57	-2.0
142,688	-		IAI47_00660	0.57	-0.0
142,688	-		IAI47_00660	0.57	+0.4
142,688	-		IAI47_00660	0.57	+0.1
142,688	-		IAI47_00660	0.57	+0.1
142,688	-		IAI47_00660	0.57	-1.7
142,688	-		IAI47_00660	0.57	-1.4
142,688	-		IAI47_00660	0.57	-0.1
142,688	-		IAI47_00660	0.57	-2.2
142,688	-		IAI47_00660	0.57	+0.9
142,703	-		IAI47_00660	0.58	-1.9
142,703	-		IAI47_00660	0.58	-0.9
142,720	+		IAI47_00660	0.60	-1.6
142,721	-		IAI47_00660	0.60	+0.7
142,721	-		IAI47_00660	0.60	-0.6
142,721	-		IAI47_00660	0.60	-1.1
142,721	-		IAI47_00660	0.60	-0.1
142,721	-		IAI47_00660	0.60	+0.4
142,721	-		IAI47_00660	0.60	-1.5
142,721	-		IAI47_00660	0.60	-1.2
142,721	-		IAI47_00660	0.60	+0.6
142,721	-		IAI47_00660	0.60	+0.2
142,721	-		IAI47_00660	0.60	+0.3
142,721	-		IAI47_00660	0.60	-1.5
142,721	-		IAI47_00660	0.60	-3.0
142,721	-		IAI47_00660	0.60	-3.3
142,741	+		IAI47_00660	0.62	-1.9
142,742	-		IAI47_00660	0.62	+0.6
142,779	+		IAI47_00660	0.65	-0.5
142,854	-		IAI47_00660	0.72	+0.1
142,854	-		IAI47_00660	0.72	+0.0
142,866	+		IAI47_00660	0.73	-2.5
142,867	-		IAI47_00660	0.73	+0.7
142,867	-		IAI47_00660	0.73	+0.6
142,867	-		IAI47_00660	0.73	+0.7
142,867	-		IAI47_00660	0.73	+0.6
142,867	-		IAI47_00660	0.73	-1.3
142,893	-		IAI47_00660	0.76	-2.2
142,916	-		IAI47_00660	0.78	-1.2
143,005	+		IAI47_00660	0.86	-3.0
143,005	+		IAI47_00660	0.86	-1.7
143,006	-		IAI47_00660	0.86	+0.2
143,007	+		IAI47_00660	0.86	-0.3
143,007	+		IAI47_00660	0.86	-2.8
143,008	-		IAI47_00660	0.87	-1.9
143,101	+				-4.2
143,102	-				-2.3
143,108	+				-2.1
143,109	-				-0.3
143,109	-				+0.2
143,109	-				+1.7
143,111	+				-1.3
143,111	+				+0.0
143,111	+				-1.1
143,112	-				-0.6
143,112	-				+1.3
143,112	-				+0.2
143,112	-				-1.3
143,114	-				-1.3
143,114	-				-1.8
143,114	-				+0.2
143,152	+				-2.2
143,153	-				+0.5
143,153	-				-0.2
143,187	+				-2.5
143,188	-				-2.0
143,188	-				+0.3
143,227	+				+0.7
143,227	+				-0.0
143,228	-				+0.0
143,231	+				-0.8
143,231	+				-0.4
143,231	+				-0.4
143,231	+				-0.1
143,231	+				-2.4
143,231	+				+1.2
143,231	+				-1.3
143,232	-				+2.1
143,232	-				-0.4
143,235	-				+0.6
143,245	+				+0.6
143,246	-				+0.0
143,262	+				-0.1
143,262	+				+0.4
143,262	+				-1.3
143,275	+				+0.4
143,275	+				+2.1
143,276	-				+0.0
143,276	-				-1.0
143,276	-				+0.2
143,276	-				-0.8
143,285	+				-0.6
143,286	-				+2.3
143,286	-				+2.1
143,300	+				-0.3
143,300	+				+0.2
143,301	-				+0.2
143,301	-				-0.6
143,304	+				-2.0
143,304	+				+0.6
143,304	+				+0.7
143,304	+				-1.0
143,304	+				+0.1
143,304	+				+0.1
143,305	-				-0.1
143,305	-				-0.3
143,305	-				+0.4
143,305	-				-1.9
143,305	-				-0.3
143,305	-				-0.5
143,422	+		IAI47_00665	0.19	-1.3
143,422	+		IAI47_00665	0.19	-0.1
143,437	+		IAI47_00665	0.20	-0.7
143,437	+		IAI47_00665	0.20	-0.3
143,438	-		IAI47_00665	0.20	+0.7
143,438	-		IAI47_00665	0.20	+1.3
143,438	-		IAI47_00665	0.20	+1.3
143,468	+		IAI47_00665	0.23	-2.5
143,468	+		IAI47_00665	0.23	+0.5
143,469	-		IAI47_00665	0.23	-2.0
143,469	-		IAI47_00665	0.23	+2.6
143,469	-		IAI47_00665	0.23	+0.4
143,500	+		IAI47_00665	0.26	+1.1
143,500	+		IAI47_00665	0.26	+0.2
143,500	+		IAI47_00665	0.26	-2.3
143,501	-		IAI47_00665	0.26	-0.5
143,501	-		IAI47_00665	0.26	-0.8
143,501	-		IAI47_00665	0.26	+0.6
143,512	+		IAI47_00665	0.27	-1.7
143,513	-		IAI47_00665	0.27	-0.2
143,567	+		IAI47_00665	0.33	+2.1
143,567	+		IAI47_00665	0.33	-0.4
143,567	+		IAI47_00665	0.33	+0.2
143,567	+		IAI47_00665	0.33	+1.5
143,567	+		IAI47_00665	0.33	-0.6
143,567	+		IAI47_00665	0.33	+1.8
143,567	+		IAI47_00665	0.33	-2.8
143,567	+		IAI47_00665	0.33	-1.1
143,567	+		IAI47_00665	0.33	+0.2
143,567	+		IAI47_00665	0.33	+1.7
143,567	+		IAI47_00665	0.33	+1.4
143,567	+		IAI47_00665	0.33	-1.6
143,567	+		IAI47_00665	0.33	-1.3
143,567	+		IAI47_00665	0.33	-1.4
143,567	+		IAI47_00665	0.33	+0.4
143,567	+		IAI47_00665	0.33	-0.1
143,567	+		IAI47_00665	0.33	+0.4
143,567	+		IAI47_00665	0.33	+0.2
143,567	+		IAI47_00665	0.33	+0.7
143,568	-		IAI47_00665	0.33	-1.8
143,568	-		IAI47_00665	0.33	+2.5
143,568	-		IAI47_00665	0.33	+2.7
143,568	-		IAI47_00665	0.33	+0.9
143,568	-		IAI47_00665	0.33	-1.2
143,568	-		IAI47_00665	0.33	-0.6
143,568	-		IAI47_00665	0.33	+1.1
143,568	-		IAI47_00665	0.33	-0.9
143,568	-		IAI47_00665	0.33	+0.9
143,568	-		IAI47_00665	0.33	-2.5
143,568	-		IAI47_00665	0.33	+0.5
143,568	-		IAI47_00665	0.33	-1.2
143,568	-		IAI47_00665	0.33	+1.6
143,568	-		IAI47_00665	0.33	-0.4
143,568	-		IAI47_00665	0.33	+0.8
143,568	-		IAI47_00665	0.33	-0.5
143,568	-		IAI47_00665	0.33	+0.2
143,569	+		IAI47_00665	0.33	-1.3
143,569	+		IAI47_00665	0.33	-1.5
143,569	+		IAI47_00665	0.33	-3.0
143,569	+		IAI47_00665	0.33	-0.4
143,569	+		IAI47_00665	0.33	+0.4
143,569	+		IAI47_00665	0.33	+0.7
143,569	+		IAI47_00665	0.33	-1.0
143,569	+		IAI47_00665	0.33	-0.6
143,569	+		IAI47_00665	0.33	-0.4
143,569	+		IAI47_00665	0.33	-0.6
143,569	+		IAI47_00665	0.33	-1.7
143,569	+		IAI47_00665	0.33	-1.7
143,569	+		IAI47_00665	0.33	+0.3
143,569	+		IAI47_00665	0.33	+0.7
143,569	+		IAI47_00665	0.33	-1.0
143,569	+		IAI47_00665	0.33	+0.1
143,569	+		IAI47_00665	0.33	+0.9
143,569	+		IAI47_00665	0.33	-0.1
143,570	-		IAI47_00665	0.33	-0.3
143,570	-		IAI47_00665	0.33	-0.1
143,570	-		IAI47_00665	0.33	-1.1
143,570	-		IAI47_00665	0.33	-0.7
143,570	-		IAI47_00665	0.33	-1.2
143,570	-		IAI47_00665	0.33	-0.0
143,570	-		IAI47_00665	0.33	-0.0
143,570	-		IAI47_00665	0.33	+1.2
143,570	-		IAI47_00665	0.33	+1.0
143,570	-		IAI47_00665	0.33	-2.4
143,570	-		IAI47_00665	0.33	-0.8
143,570	-		IAI47_00665	0.33	+1.1
143,570	-		IAI47_00665	0.33	+0.4
143,572	+		IAI47_00665	0.33	-1.9
143,572	+		IAI47_00665	0.33	-2.3
143,573	-		IAI47_00665	0.33	-1.3
143,573	-		IAI47_00665	0.33	-0.3
143,573	-		IAI47_00665	0.33	-2.1
143,573	-		IAI47_00665	0.33	-0.3
143,573	-		IAI47_00665	0.33	-0.7
143,573	-		IAI47_00665	0.33	-1.4
143,578	+		IAI47_00665	0.34	-0.1
143,578	+		IAI47_00665	0.34	+0.5
143,578	+		IAI47_00665	0.34	+0.3
143,578	+		IAI47_00665	0.34	-1.3
143,579	-		IAI47_00665	0.34	-0.5
143,583	+		IAI47_00665	0.34	+0.5
143,583	+		IAI47_00665	0.34	-1.9
143,584	-		IAI47_00665	0.34	-0.3
143,584	-		IAI47_00665	0.34	+0.7
143,584	-		IAI47_00665	0.34	-0.5
143,584	-		IAI47_00665	0.34	-2.0
143,584	-		IAI47_00665	0.34	+0.6
143,594	+		IAI47_00665	0.35	-0.4
143,621	+		IAI47_00665	0.38	-0.9
143,621	+		IAI47_00665	0.38	+0.3
143,621	+		IAI47_00665	0.38	-0.1
143,621	+		IAI47_00665	0.38	+0.3
143,621	+		IAI47_00665	0.38	-1.9
143,621	+		IAI47_00665	0.38	-2.9
143,622	-		IAI47_00665	0.38	-1.4
143,622	-		IAI47_00665	0.38	-0.6
143,642	+		IAI47_00665	0.40	-2.1
143,642	+		IAI47_00665	0.40	+2.4
143,643	-		IAI47_00665	0.40	+1.0
143,704	+		IAI47_00665	0.46	+2.0
143,729	+		IAI47_00665	0.48	-1.9
143,729	+		IAI47_00665	0.48	-0.5
143,729	+		IAI47_00665	0.48	+0.8
143,729	+		IAI47_00665	0.48	+1.1
143,729	+		IAI47_00665	0.48	+0.4
143,729	+		IAI47_00665	0.48	+2.0
143,729	+		IAI47_00665	0.48	+2.0
143,729	+		IAI47_00665	0.48	+0.4
143,729	+		IAI47_00665	0.48	-1.8
143,729	+		IAI47_00665	0.48	+0.3
143,729	+		IAI47_00665	0.48	-0.6
143,729	+		IAI47_00665	0.48	-0.2
143,729	+		IAI47_00665	0.48	-0.1
143,729	+		IAI47_00665	0.48	-0.4
143,729	+		IAI47_00665	0.48	+0.6
143,729	+		IAI47_00665	0.48	-1.1
143,730	-		IAI47_00665	0.48	+0.3
143,730	-		IAI47_00665	0.48	-0.2
143,730	-		IAI47_00665	0.48	-0.3
143,730	-		IAI47_00665	0.48	-1.0
143,730	-		IAI47_00665	0.48	-1.1
143,730	-		IAI47_00665	0.48	-0.7
143,730	-		IAI47_00665	0.48	-0.8
143,730	-		IAI47_00665	0.48	-0.4
143,730	-		IAI47_00665	0.48	-1.0
143,730	-		IAI47_00665	0.48	-2.9
143,730	-		IAI47_00665	0.48	-2.3
143,730	-		IAI47_00665	0.48	+2.7
143,731	+		IAI47_00665	0.48	-2.6
143,731	+		IAI47_00665	0.48	-0.3
143,731	+		IAI47_00665	0.48	-1.3
143,732	-		IAI47_00665	0.48	-0.2
143,732	-		IAI47_00665	0.48	-1.0
143,732	-		IAI47_00665	0.48	+0.2
143,732	-		IAI47_00665	0.48	+1.6
143,732	-		IAI47_00665	0.48	+1.2
143,732	-		IAI47_00665	0.48	+0.5
143,732	-		IAI47_00665	0.48	+0.2
143,821	-		IAI47_00665	0.57	+0.9
143,831	+		IAI47_00665	0.58	-0.1
143,831	+		IAI47_00665	0.58	+0.2
143,831	+		IAI47_00665	0.58	-0.4
143,832	-		IAI47_00665	0.58	-3.2
143,908	+		IAI47_00665	0.65	-0.4
143,908	+		IAI47_00665	0.65	+2.0
143,908	+		IAI47_00665	0.65	-1.0
143,908	+		IAI47_00665	0.65	+1.5
143,908	+		IAI47_00665	0.65	-1.6
143,908	+		IAI47_00665	0.65	+0.2
143,908	+		IAI47_00665	0.65	-0.3
143,908	+		IAI47_00665	0.65	-1.2
143,908	+		IAI47_00665	0.65	-0.7
143,908	+		IAI47_00665	0.65	+1.0
143,908	+		IAI47_00665	0.65	-0.5
143,909	-		IAI47_00665	0.65	-1.1
143,909	-		IAI47_00665	0.65	+0.8
143,909	-		IAI47_00665	0.65	-0.5
143,909	-		IAI47_00665	0.65	-0.6
143,909	-		IAI47_00665	0.65	-0.3
143,909	-		IAI47_00665	0.65	-1.7
143,909	-		IAI47_00665	0.65	-2.1
143,909	-		IAI47_00665	0.65	-0.7
143,909	-		IAI47_00665	0.65	+2.6
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