Strain Fitness in Pantoea sp. MT58 around IAI47_19470

Experiment: Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
121,415	-		IAI47_19460	0.48	-2.5
121,541	-		IAI47_19460	0.62	+0.6
121,541	-		IAI47_19460	0.62	-0.3
121,541	-		IAI47_19460	0.62	+1.7
121,541	-		IAI47_19460	0.62	+1.3
121,541	-		IAI47_19460	0.62	-1.8
121,541	-		IAI47_19460	0.62	-0.8
121,541	-		IAI47_19460	0.62	-1.5
121,551	-		IAI47_19460	0.63	+2.7
121,551	-		IAI47_19460	0.63	+2.0
121,553	+		IAI47_19460	0.63	+0.1
121,553	+		IAI47_19460	0.63	+0.9
121,554	-		IAI47_19460	0.63	-0.3
121,650	+		IAI47_19460	0.74	+1.1
121,650	+		IAI47_19460	0.74	+0.9
121,687	-		IAI47_19460	0.78	-0.0
121,696	-		IAI47_19460	0.79	-0.8
121,696	-		IAI47_19460	0.79	+0.5
121,732	+		IAI47_19460	0.83	+0.2
121,747	-		IAI47_19460	0.85	+0.6
121,747	-		IAI47_19460	0.85	-1.4
121,757	+		IAI47_19460	0.86	+1.2
121,757	+		IAI47_19460	0.86	-1.1
121,757	+		IAI47_19460	0.86	+0.2
121,790	+		IAI47_19460	0.90	-0.0
121,790	+		IAI47_19460	0.90	+0.2
121,790	+		IAI47_19460	0.90	+1.2
121,790	+		IAI47_19460	0.90	+1.9
121,790	+		IAI47_19460	0.90	-1.7
121,790	+		IAI47_19460	0.90	-1.1
121,790	+		IAI47_19460	0.90	-1.6
121,790	+		IAI47_19460	0.90	+1.3
121,790	+		IAI47_19460	0.90	-1.4
121,790	+		IAI47_19460	0.90	-0.5
121,791	-		IAI47_19460	0.90	+0.7
121,791	-		IAI47_19460	0.90	+0.6
121,791	-		IAI47_19460	0.90	+0.3
121,791	-		IAI47_19460	0.90	-1.4
121,791	-		IAI47_19460	0.90	+1.5
121,791	-		IAI47_19460	0.90	-1.3
121,791	-		IAI47_19460	0.90	+0.7
121,791	-		IAI47_19460	0.90	-0.3
121,853	-				-2.1
121,853	-				-0.5
121,853	-				+2.1
121,881	-				-0.7
121,881	-				-1.2
121,903	+				-0.9
121,913	-				+0.1
121,913	-				+1.7
121,913	-				-0.3
121,921	+				-2.2
121,921	+				+0.5
121,921	+				-0.4
121,921	+				-0.3
121,921	+				+0.2
121,921	+				+0.0
121,921	+				+0.0
121,921	+				+0.1
121,921	+				-0.0
121,921	+				-1.6
121,921	+				+1.0
121,921	+				+2.8
121,921	+				+0.4
121,922	-				-0.1
121,922	-				+1.8
121,922	-				+1.0
121,922	-				+0.1
121,922	-				-1.5
121,922	-				+2.2
121,922	-				-0.7
121,922	-				-0.6
121,925	+				-0.7
121,925	+				-0.2
121,925	+				-0.7
121,925	+				-0.5
121,926	-				+2.7
121,926	-				-0.0
121,985	+		IAI47_19465	0.19	-1.6
121,986	-		IAI47_19465	0.20	-1.8
121,986	-		IAI47_19465	0.20	-1.4
121,986	-		IAI47_19465	0.20	+0.6
122,010	+		IAI47_19465	0.25	-0.1
122,010	+		IAI47_19465	0.25	+0.5
122,010	+		IAI47_19465	0.25	-1.5
122,011	-		IAI47_19465	0.25	-1.4
122,042	+		IAI47_19465	0.33	-0.3
122,042	+		IAI47_19465	0.33	-0.7
122,043	-		IAI47_19465	0.33	-0.1
122,043	-		IAI47_19465	0.33	+1.7
122,048	-		IAI47_19465	0.34	-0.7
122,051	+		IAI47_19465	0.35	-0.2
122,137	+		IAI47_19465	0.55	-0.3
122,137	+		IAI47_19465	0.55	-1.0
122,138	-		IAI47_19465	0.56	-1.5
122,138	-		IAI47_19465	0.56	+1.5
122,172	+		IAI47_19465	0.64	-1.1
122,172	+		IAI47_19465	0.64	-1.1
122,172	+		IAI47_19465	0.64	-0.8
122,172	+		IAI47_19465	0.64	-0.2
122,172	+		IAI47_19465	0.64	-0.3
122,231	+		IAI47_19465	0.78	-0.2
122,231	+		IAI47_19465	0.78	+0.1
122,231	+		IAI47_19465	0.78	+2.2
122,231	+		IAI47_19465	0.78	-1.4
122,231	+		IAI47_19465	0.78	+0.0
122,231	+		IAI47_19465	0.78	-1.1
122,231	+		IAI47_19465	0.78	-1.7
122,232	-		IAI47_19465	0.78	-0.4
122,232	-		IAI47_19465	0.78	+0.9
122,232	-		IAI47_19465	0.78	-1.0
122,291	+				-1.1
122,312	+				-0.2
122,312	+				+0.0
122,313	-				+1.4
122,313	-				-0.7
122,322	-				-0.7
122,322	-				-0.9
122,345	+				-0.4
122,347	+				+1.5
122,347	+				-0.3
122,347	+				+1.3
122,348	-				-2.3
122,348	-				-0.9
122,392	+				-1.8
122,399	+				+0.1
122,399	+				+1.5
122,400	-				+0.9
122,406	+				+0.1
122,416	+				-1.1
122,416	+				+2.6
122,417	-				+4.2
122,417	-				+0.8
122,417	-				+1.1
122,417	-				+0.2
122,417	-				-1.2
122,442	-				+2.3
122,446	+				+0.5
122,447	-				+1.5
122,474	+				+1.2
122,564	+		IAI47_19470	0.11	-1.0
122,565	-		IAI47_19470	0.11	+1.9
122,565	-		IAI47_19470	0.11	+0.8
122,565	-		IAI47_19470	0.11	-0.0
122,565	-		IAI47_19470	0.11	+0.6
122,567	+		IAI47_19470	0.11	+0.9
122,567	+		IAI47_19470	0.11	+0.9
122,568	-		IAI47_19470	0.11	-1.1
122,568	-		IAI47_19470	0.11	-1.1
122,568	-		IAI47_19470	0.11	-3.0
122,594	+		IAI47_19470	0.13	-1.1
122,594	+		IAI47_19470	0.13	-0.9
122,594	+		IAI47_19470	0.13	-1.8
122,619	+		IAI47_19470	0.14	+0.5
122,620	-		IAI47_19470	0.14	+3.6
122,632	+		IAI47_19470	0.15	+1.1
122,633	-		IAI47_19470	0.15	-0.0
122,701	+		IAI47_19470	0.20	-0.2
122,701	+		IAI47_19470	0.20	+0.4
122,802	-		IAI47_19470	0.27	-0.3
122,812	-		IAI47_19470	0.28	+0.1
122,812	-		IAI47_19470	0.28	-0.0
122,871	-		IAI47_19470	0.32	+1.3
122,887	+		IAI47_19470	0.33	+0.5
122,888	-		IAI47_19470	0.33	+0.4
122,888	-		IAI47_19470	0.33	+0.5
122,894	+		IAI47_19470	0.34	-0.5
122,894	+		IAI47_19470	0.34	+0.3
122,895	-		IAI47_19470	0.34	+1.9
122,906	+		IAI47_19470	0.35	+0.6
122,906	+		IAI47_19470	0.35	-0.9
122,906	+		IAI47_19470	0.35	+3.3
122,906	+		IAI47_19470	0.35	-0.0
122,907	-		IAI47_19470	0.35	-1.0
122,907	-		IAI47_19470	0.35	-0.4
122,907	-		IAI47_19470	0.35	+0.5
122,907	-		IAI47_19470	0.35	+2.9
122,908	+		IAI47_19470	0.35	+0.9
122,908	+		IAI47_19470	0.35	+1.1
122,908	+		IAI47_19470	0.35	-1.7
122,909	-		IAI47_19470	0.35	+3.9
122,909	-		IAI47_19470	0.35	-1.4
122,909	-		IAI47_19470	0.35	-0.2
122,909	-		IAI47_19470	0.35	+0.5
122,909	-		IAI47_19470	0.35	-2.2
122,994	+		IAI47_19470	0.41	+0.1
122,995	-		IAI47_19470	0.41	+2.5
122,995	-		IAI47_19470	0.41	-0.4
123,045	+		IAI47_19470	0.44	-1.2
123,079	+		IAI47_19470	0.47	-0.7
123,079	+		IAI47_19470	0.47	+1.5
123,080	-		IAI47_19470	0.47	+0.6
123,092	+		IAI47_19470	0.48	+2.0
123,101	+		IAI47_19470	0.48	+0.9
123,159	+		IAI47_19470	0.53	+1.9
123,183	-		IAI47_19470	0.54	-2.3
123,183	-		IAI47_19470	0.54	-0.6
123,239	+		IAI47_19470	0.58	-0.0
123,256	+		IAI47_19470	0.59	-1.9
123,256	+		IAI47_19470	0.59	-0.5
123,257	-		IAI47_19470	0.59	-1.9
123,281	+		IAI47_19470	0.61	+0.5
123,282	-		IAI47_19470	0.61	-1.5
123,282	-		IAI47_19470	0.61	+1.0
123,303	+		IAI47_19470	0.63	-1.2
123,414	+		IAI47_19470	0.71	+1.0
123,420	+		IAI47_19470	0.71	-1.7
123,420	+		IAI47_19470	0.71	-1.1
123,420	+		IAI47_19470	0.71	+1.4
123,421	-		IAI47_19470	0.71	-1.5
123,421	-		IAI47_19470	0.71	+1.4
123,421	-		IAI47_19470	0.71	-0.7
123,421	-		IAI47_19470	0.71	-1.3
123,425	+		IAI47_19470	0.71	+0.7
123,510	+		IAI47_19470	0.77	-0.3
123,511	-		IAI47_19470	0.77	+1.7
123,533	-		IAI47_19470	0.79	-0.9
123,549	-		IAI47_19470	0.80	-1.7
123,575	+		IAI47_19470	0.82	-1.4
123,575	+		IAI47_19470	0.82	+0.9
123,575	+		IAI47_19470	0.82	+0.6
123,576	-		IAI47_19470	0.82	-0.3
123,576	-		IAI47_19470	0.82	+0.8
123,576	-		IAI47_19470	0.82	-2.5
123,576	-		IAI47_19470	0.82	+0.3
123,583	+		IAI47_19470	0.82	+1.2
123,583	+		IAI47_19470	0.82	+2.0
123,583	+		IAI47_19470	0.82	-0.5
123,583	+		IAI47_19470	0.82	+0.6
123,584	-		IAI47_19470	0.83	-0.4
123,584	-		IAI47_19470	0.83	-1.2
123,584	-		IAI47_19470	0.83	-0.2
123,584	-		IAI47_19470	0.83	-0.1
123,584	-		IAI47_19470	0.83	+0.4
123,584	-		IAI47_19470	0.83	-0.9
123,584	-		IAI47_19470	0.83	-1.4
123,584	-		IAI47_19470	0.83	-1.1
123,584	-		IAI47_19470	0.83	+1.5
123,584	-		IAI47_19470	0.83	-1.6
123,584	-		IAI47_19470	0.83	+0.9
123,648	+		IAI47_19470	0.87	-0.7
123,648	+		IAI47_19470	0.87	-1.2
123,648	+		IAI47_19470	0.87	-1.2
123,649	-		IAI47_19470	0.87	+0.1
123,649	-		IAI47_19470	0.87	-0.4
123,649	-		IAI47_19470	0.87	+1.3
123,673	+		IAI47_19470	0.89	-0.9
123,674	-		IAI47_19470	0.89	+0.9
123,674	-		IAI47_19470	0.89	+0.5
123,764	+				+1.7
123,764	+				-2.5
123,764	+				-0.6
123,764	+				-1.6
123,764	+				+0.1
123,764	+				-0.0
123,765	-				-1.3
123,765	-				+1.9
123,832	+				-0.3
123,832	+				+0.2
123,832	+				-1.1
123,833	-				-1.9
123,833	-				+0.5
123,880	+				+0.1
124,126	+		IAI47_19475	0.17	+0.6
124,127	-		IAI47_19475	0.17	-0.4
124,127	-		IAI47_19475	0.17	-0.9
124,298	+		IAI47_19475	0.30	-0.6
124,298	+		IAI47_19475	0.30	+1.5
124,298	+		IAI47_19475	0.30	-1.0
124,298	+		IAI47_19475	0.30	-0.1
124,299	-		IAI47_19475	0.30	-0.6
124,299	-		IAI47_19475	0.30	+1.0
124,299	-		IAI47_19475	0.30	+2.8
124,299	-		IAI47_19475	0.30	+0.1
124,299	-		IAI47_19475	0.30	-0.1
124,438	+		IAI47_19475	0.41	+0.0
124,438	+		IAI47_19475	0.41	-0.3
124,438	+		IAI47_19475	0.41	-1.5
124,439	-		IAI47_19475	0.41	+1.8
124,439	-		IAI47_19475	0.41	-0.3
124,439	-		IAI47_19475	0.41	+0.3
124,439	-		IAI47_19475	0.41	+1.1
124,527	+		IAI47_19475	0.48	-0.6
124,527	+		IAI47_19475	0.48	+1.0
124,528	-		IAI47_19475	0.48	-0.6
124,528	-		IAI47_19475	0.48	+1.3
124,568	-		IAI47_19475	0.51	+1.5
124,568	-		IAI47_19475	0.51	-2.5
124,679	+		IAI47_19475	0.60	-0.4
124,727	+		IAI47_19475	0.64	-0.4
124,727	+		IAI47_19475	0.64	+0.7
124,727	+		IAI47_19475	0.64	+0.2
124,727	+		IAI47_19475	0.64	-1.2
124,728	-		IAI47_19475	0.64	+1.7
124,728	-		IAI47_19475	0.64	+0.5
124,767	+		IAI47_19475	0.67	-0.3
124,768	-		IAI47_19475	0.67	+1.2