Strain Fitness in Pantoea sp. MT58 around IAI47_17625

Experiment: Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
3,738,307	-		IAI47_17615	0.57	-0.7
3,738,315	+		IAI47_17615	0.58	+0.3
3,738,315	+		IAI47_17615	0.58	-0.0
3,738,315	+		IAI47_17615	0.58	-2.2
3,738,315	+		IAI47_17615	0.58	-1.0
3,738,315	+		IAI47_17615	0.58	+0.9
3,738,315	+		IAI47_17615	0.58	-2.8
3,738,316	-		IAI47_17615	0.58	+0.1
3,738,316	-		IAI47_17615	0.58	+0.6
3,738,316	-		IAI47_17615	0.58	-1.0
3,738,316	-		IAI47_17615	0.58	+0.6
3,738,316	-		IAI47_17615	0.58	-1.3
3,738,316	-		IAI47_17615	0.58	-2.4
3,738,330	+		IAI47_17615	0.60	+5.9
3,738,331	-		IAI47_17615	0.60	-0.8
3,738,364	-		IAI47_17615	0.64	+0.8
3,738,371	+		IAI47_17615	0.65	+0.6
3,738,371	+		IAI47_17615	0.65	-1.5
3,738,372	-		IAI47_17615	0.65	+1.5
3,738,372	-		IAI47_17615	0.65	+0.5
3,738,372	-		IAI47_17615	0.65	-0.8
3,738,381	+		IAI47_17615	0.66	+0.0
3,738,381	+		IAI47_17615	0.66	+0.3
3,738,381	+		IAI47_17615	0.66	+3.9
3,738,381	+		IAI47_17615	0.66	-0.3
3,738,382	-		IAI47_17615	0.66	-0.7
3,738,382	-		IAI47_17615	0.66	+3.2
3,738,382	-		IAI47_17615	0.66	-1.1
3,738,413	+		IAI47_17615	0.69	-0.7
3,738,413	+		IAI47_17615	0.69	-0.1
3,738,413	+		IAI47_17615	0.69	-1.0
3,738,414	-		IAI47_17615	0.70	-0.4
3,738,423	+		IAI47_17615	0.71	-0.7
3,738,423	+		IAI47_17615	0.71	-0.8
3,738,423	+		IAI47_17615	0.71	+0.0
3,738,424	-		IAI47_17615	0.71	-1.3
3,738,424	-		IAI47_17615	0.71	-1.3
3,738,424	-		IAI47_17615	0.71	+1.8
3,738,424	-		IAI47_17615	0.71	-1.8
3,738,424	-		IAI47_17615	0.71	-1.1
3,738,497	+		IAI47_17615	0.79	-0.3
3,738,497	+		IAI47_17615	0.79	+0.3
3,738,497	+		IAI47_17615	0.79	+2.0
3,738,498	-		IAI47_17615	0.79	-0.8
3,738,529	-		IAI47_17615	0.83	-0.0
3,738,529	-		IAI47_17615	0.83	-0.5
3,738,562	-		IAI47_17615	0.87	-1.4
3,738,570	-		IAI47_17615	0.88	-0.9
3,738,648	+				-2.1
3,738,651	+				+0.4
3,738,651	+				-0.2
3,738,651	+				-1.4
3,738,651	+				-0.8
3,738,651	+				+2.7
3,738,651	+				+0.5
3,738,652	-				+0.1
3,738,652	-				-0.0
3,738,652	-				-0.4
3,738,652	-				-1.9
3,738,652	-				+2.9
3,738,652	-				-1.3
3,738,668	+				+0.0
3,738,668	+				-0.8
3,738,668	+				+2.2
3,738,668	+				+0.2
3,738,669	-				+0.6
3,738,681	+				-0.5
3,738,682	-				+0.5
3,738,709	+				-0.6
3,738,710	-				-1.9
3,738,766	+				+0.4
3,738,767	-				-0.1
3,738,775	-				+1.4
3,738,798	+				+0.5
3,738,798	+				-0.3
3,738,799	-				+1.4
3,738,799	-				-0.1
3,738,845	-		IAI47_17620	0.11	-1.0
3,738,959	-		IAI47_17620	0.37	-0.3
3,739,049	+		IAI47_17620	0.58	-1.3
3,739,050	-		IAI47_17620	0.58	+0.9
3,739,126	+		IAI47_17620	0.75	+0.0
3,739,127	-		IAI47_17620	0.75	+0.6
3,739,151	+		IAI47_17620	0.81	-0.2
3,739,151	+		IAI47_17620	0.81	+0.1
3,739,151	+		IAI47_17620	0.81	-0.2
3,739,151	+		IAI47_17620	0.81	-0.0
3,739,152	-		IAI47_17620	0.81	+0.7
3,739,152	-		IAI47_17620	0.81	-0.8
3,739,176	+		IAI47_17620	0.87	-1.2
3,739,176	+		IAI47_17620	0.87	-0.1
3,739,206	+				-0.0
3,739,206	+				+0.7
3,739,207	-				+0.8
3,739,218	+				+0.3
3,739,219	-				+1.3
3,739,219	-				-1.9
3,739,219	-				-0.0
3,739,219	-				-0.8
3,739,219	-				+0.3
3,739,225	+				-1.3
3,739,225	+				+2.7
3,739,225	+				-0.1
3,739,225	+				-1.1
3,739,226	-				+0.1
3,739,226	-				-2.0
3,739,237	+				-0.1
3,739,237	+				+1.8
3,739,238	-				-0.8
3,739,238	-				-0.6
3,739,244	+				-0.2
3,739,244	+				-0.5
3,739,245	-				+2.2
3,739,269	-				-1.4
3,739,299	+				+1.6
3,739,339	+				+0.9
3,739,340	-				+0.6
3,739,342	-				+0.6
3,739,342	-				+0.5
3,739,386	+				+0.6
3,739,386	+				-1.5
3,739,387	-				+0.8
3,739,477	+		IAI47_17625	0.19	+3.0
3,739,477	+		IAI47_17625	0.19	+0.9
3,739,477	+		IAI47_17625	0.19	-1.8
3,739,477	+		IAI47_17625	0.19	-0.2
3,739,478	-		IAI47_17625	0.19	-0.8
3,739,478	-		IAI47_17625	0.19	+0.9
3,739,519	+		IAI47_17625	0.24	-0.2
3,739,520	-		IAI47_17625	0.24	-1.6
3,739,546	+		IAI47_17625	0.27	-0.3
3,739,546	+		IAI47_17625	0.27	-1.3
3,739,590	+		IAI47_17625	0.32	+1.0
3,739,590	+		IAI47_17625	0.32	+0.6
3,739,590	+		IAI47_17625	0.32	+0.2
3,739,591	-		IAI47_17625	0.32	-0.2
3,739,593	+		IAI47_17625	0.32	-0.3
3,739,593	+		IAI47_17625	0.32	-1.6
3,739,593	+		IAI47_17625	0.32	+0.4
3,739,593	+		IAI47_17625	0.32	+0.9
3,739,593	+		IAI47_17625	0.32	+0.0
3,739,593	+		IAI47_17625	0.32	+0.3
3,739,593	+		IAI47_17625	0.32	+0.8
3,739,593	+		IAI47_17625	0.32	-0.5
3,739,594	-		IAI47_17625	0.32	+1.2
3,739,594	-		IAI47_17625	0.32	-2.1
3,739,594	-		IAI47_17625	0.32	+0.5
3,739,594	-		IAI47_17625	0.32	-1.1
3,739,634	+		IAI47_17625	0.36	+1.6
3,739,634	+		IAI47_17625	0.36	-0.3
3,739,635	-		IAI47_17625	0.37	-0.3
3,739,635	-		IAI47_17625	0.37	+0.2
3,739,692	+		IAI47_17625	0.43	+0.2
3,739,716	+		IAI47_17625	0.46	-1.1
3,739,716	+		IAI47_17625	0.46	+0.5
3,739,716	+		IAI47_17625	0.46	+0.2
3,739,716	+		IAI47_17625	0.46	+0.3
3,739,716	+		IAI47_17625	0.46	+0.2
3,739,716	+		IAI47_17625	0.46	-0.2
3,739,717	-		IAI47_17625	0.46	-1.3
3,739,717	-		IAI47_17625	0.46	-1.6
3,739,717	-		IAI47_17625	0.46	-0.2
3,739,717	-		IAI47_17625	0.46	+0.5
3,739,717	-		IAI47_17625	0.46	-1.0
3,739,717	-		IAI47_17625	0.46	+1.0
3,739,717	-		IAI47_17625	0.46	-1.8
3,739,717	-		IAI47_17625	0.46	+1.0
3,739,717	-		IAI47_17625	0.46	+0.4
3,739,749	+		IAI47_17625	0.49	+0.5
3,739,749	+		IAI47_17625	0.49	+0.8
3,739,749	+		IAI47_17625	0.49	+0.5
3,739,749	+		IAI47_17625	0.49	+0.5
3,739,749	+		IAI47_17625	0.49	-0.4
3,739,749	+		IAI47_17625	0.49	+0.8
3,739,750	-		IAI47_17625	0.49	+2.7
3,739,750	-		IAI47_17625	0.49	+3.1
3,739,750	-		IAI47_17625	0.49	-1.3
3,739,750	-		IAI47_17625	0.49	-1.4
3,739,750	-		IAI47_17625	0.49	-0.0
3,739,750	-		IAI47_17625	0.49	-0.2
3,739,750	-		IAI47_17625	0.49	+0.4
3,739,753	+		IAI47_17625	0.50	+0.6
3,739,753	+		IAI47_17625	0.50	-0.1
3,739,753	+		IAI47_17625	0.50	-0.4
3,739,753	+		IAI47_17625	0.50	-0.3
3,739,753	+		IAI47_17625	0.50	+1.6
3,739,753	+		IAI47_17625	0.50	+0.6
3,739,753	+		IAI47_17625	0.50	-1.3
3,739,753	+		IAI47_17625	0.50	+0.1
3,739,754	-		IAI47_17625	0.50	-1.1
3,739,754	-		IAI47_17625	0.50	-1.6
3,739,754	-		IAI47_17625	0.50	+1.5
3,739,754	-		IAI47_17625	0.50	+2.0
3,739,754	-		IAI47_17625	0.50	+1.4
3,739,754	-		IAI47_17625	0.50	+0.4
3,739,754	-		IAI47_17625	0.50	+0.9
3,739,754	-		IAI47_17625	0.50	+1.2
3,739,798	+		IAI47_17625	0.55	+1.4
3,739,798	+		IAI47_17625	0.55	+0.3
3,739,798	+		IAI47_17625	0.55	+2.2
3,739,798	+		IAI47_17625	0.55	+2.2
3,739,798	+		IAI47_17625	0.55	-0.4
3,739,799	-		IAI47_17625	0.55	+0.7
3,739,799	-		IAI47_17625	0.55	+0.6
3,739,799	-		IAI47_17625	0.55	+1.0
3,739,799	-		IAI47_17625	0.55	+0.4
3,739,842	+		IAI47_17625	0.60	-1.9
3,739,862	+		IAI47_17625	0.62	-1.4
3,739,862	+		IAI47_17625	0.62	+1.1
3,739,862	+		IAI47_17625	0.62	+0.1
3,739,862	+		IAI47_17625	0.62	-0.1
3,739,862	+		IAI47_17625	0.62	-0.0
3,739,863	-		IAI47_17625	0.62	+3.5
3,739,863	-		IAI47_17625	0.62	-1.5
3,739,863	-		IAI47_17625	0.62	-0.1
3,739,910	-		IAI47_17625	0.67	-0.1
3,739,910	-		IAI47_17625	0.67	+1.2
3,740,006	-		IAI47_17625	0.78	-0.4
3,740,047	+		IAI47_17625	0.82	+1.5
3,740,097	-		IAI47_17625	0.88	+0.7
3,740,203	+				-2.6
3,740,203	+				-0.1
3,740,203	+				-2.9
3,740,203	+				-0.3
3,740,204	-				+0.0
3,740,226	-				+0.2
3,740,239	+				+0.8
3,740,240	-				+1.4
3,740,250	+				+1.0
3,740,250	+				+0.0
3,740,250	+				+1.0
3,740,250	+				-2.1
3,740,250	+				-1.2
3,740,250	+				+1.9
3,740,251	-				-0.2
3,740,251	-				+0.8
3,740,251	-				+0.9
3,740,251	-				+0.4
3,740,251	-				-0.6
3,740,272	+				-0.5
3,740,272	+				+0.8
3,740,390	+				+1.9
3,740,390	+				+2.0
3,740,391	-				+0.4
3,740,430	+				-0.2
3,740,430	+				+0.5
3,740,430	+				+0.6
3,740,430	+				-0.7
3,740,449	+				+0.3
3,740,449	+				+2.0
3,740,449	+				-0.4
3,740,450	-		IAI47_17630	0.10	+0.6
3,740,450	-		IAI47_17630	0.10	+1.4
3,740,450	-		IAI47_17630	0.10	-1.5
3,740,459	+		IAI47_17630	0.11	-1.2
3,740,460	-		IAI47_17630	0.11	-0.3
3,740,511	+		IAI47_17630	0.15	-2.1
3,740,511	+		IAI47_17630	0.15	-1.0
3,740,512	-		IAI47_17630	0.15	-0.3
3,740,512	-		IAI47_17630	0.15	+0.6
3,740,526	+		IAI47_17630	0.16	+0.1
3,740,527	-		IAI47_17630	0.16	-0.8
3,740,666	-		IAI47_17630	0.26	+1.9
3,740,706	+		IAI47_17630	0.30	-2.0
3,740,842	+		IAI47_17630	0.40	-2.1
3,740,842	+		IAI47_17630	0.40	+0.4
3,740,843	-		IAI47_17630	0.40	+2.0
3,740,930	-		IAI47_17630	0.47	-0.6
3,740,973	+		IAI47_17630	0.50	-0.8
3,740,973	+		IAI47_17630	0.50	-1.3
3,740,974	-		IAI47_17630	0.50	-1.4
3,740,974	-		IAI47_17630	0.50	+1.5
3,740,999	-		IAI47_17630	0.52	+0.0
3,741,001	+		IAI47_17630	0.52	-1.5
3,741,001	+		IAI47_17630	0.52	+0.3
3,741,001	+		IAI47_17630	0.52	+0.4
3,741,001	+		IAI47_17630	0.52	+2.7
3,741,001	+		IAI47_17630	0.52	+0.8
3,741,001	+		IAI47_17630	0.52	-0.3
3,741,001	+		IAI47_17630	0.52	-0.5
3,741,001	+		IAI47_17630	0.52	+0.8
3,741,001	+		IAI47_17630	0.52	-0.5
3,741,002	-		IAI47_17630	0.52	+0.5
3,741,002	-		IAI47_17630	0.52	-3.2
3,741,002	-		IAI47_17630	0.52	-1.1
3,741,002	-		IAI47_17630	0.52	-1.7
3,741,002	-		IAI47_17630	0.52	-2.1
3,741,114	+		IAI47_17630	0.61	+0.0
3,741,114	+		IAI47_17630	0.61	+1.3
3,741,115	-		IAI47_17630	0.61	-0.4
3,741,159	+		IAI47_17630	0.64	-0.9
3,741,160	-		IAI47_17630	0.64	-1.5