Strain Fitness in Pantoea sp. MT58 around IAI47_16815

Experiment: Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
3,560,152	+		IAI47_16810	0.27	-0.2
3,560,212	+		IAI47_16810	0.32	+0.9
3,560,213	-		IAI47_16810	0.32	+1.1
3,560,220	-		IAI47_16810	0.32	-0.6
3,560,255	+		IAI47_16810	0.35	-0.8
3,560,255	+		IAI47_16810	0.35	+2.0
3,560,256	-		IAI47_16810	0.35	-3.3
3,560,312	-		IAI47_16810	0.40	+1.6
3,560,366	+		IAI47_16810	0.44	-1.8
3,560,410	+		IAI47_16810	0.48	-1.6
3,560,463	-		IAI47_16810	0.52	+0.2
3,560,472	-		IAI47_16810	0.53	-1.0
3,560,489	-		IAI47_16810	0.54	-0.3
3,560,491	+		IAI47_16810	0.55	-2.4
3,560,492	-		IAI47_16810	0.55	-0.1
3,560,571	-		IAI47_16810	0.61	-0.7
3,560,571	-		IAI47_16810	0.61	-0.8
3,560,579	-		IAI47_16810	0.62	-1.4
3,560,588	+		IAI47_16810	0.63	+0.0
3,560,589	-		IAI47_16810	0.63	+0.2
3,560,633	-				+0.1
3,560,635	+		IAI47_16810	0.67	-0.7
3,560,635	+		IAI47_16810	0.67	-0.7
3,560,641	-		IAI47_16810	0.67	+0.4
3,560,641	-		IAI47_16810	0.67	-1.6
3,560,641	-		IAI47_16810	0.67	-0.1
3,560,649	+		IAI47_16810	0.68	-0.0
3,560,665	+		IAI47_16810	0.69	-1.5
3,560,665	+		IAI47_16810	0.69	-2.2
3,560,666	-		IAI47_16810	0.69	+0.7
3,560,666	-		IAI47_16810	0.69	-0.6
3,560,692	+		IAI47_16810	0.71	-1.9
3,560,692	+		IAI47_16810	0.71	-1.1
3,560,693	-		IAI47_16810	0.71	-2.2
3,560,696	+		IAI47_16810	0.72	-0.3
3,560,773	+		IAI47_16810	0.78	-0.2
3,560,773	+		IAI47_16810	0.78	-0.3
3,560,775	+		IAI47_16810	0.78	+0.2
3,560,846	+		IAI47_16810	0.84	-1.1
3,560,847	-		IAI47_16810	0.84	+1.7
3,560,867	-		IAI47_16810	0.86	-0.1
3,560,885	-		IAI47_16810	0.87	-1.3
3,560,885	-		IAI47_16810	0.87	+0.1
3,560,914	+		IAI47_16810	0.90	-1.0
3,560,915	-		IAI47_16810	0.90	-0.7
3,560,915	-		IAI47_16810	0.90	-0.9
3,560,918	-		IAI47_16810	0.90	-0.1
3,560,949	-				+0.4
3,560,962	-				-0.7
3,560,970	-				-0.8
3,560,974	+				-0.9
3,560,978	-				+1.4
3,560,992	+				+0.9
3,561,006	-				+0.0
3,561,045	+				+0.3
3,561,045	+				+0.8
3,561,095	+				+2.8
3,561,096	-				+0.7
3,561,168	+				+1.4
3,561,169	-				-0.3
3,561,169	-				+0.6
3,561,171	+				+0.5
3,561,172	-				+2.5
3,561,182	-				-2.6
3,561,203	-		IAI47_16815	0.12	-0.7
3,561,203	-		IAI47_16815	0.12	-2.0
3,561,260	+		IAI47_16815	0.24	+0.0
3,561,302	+		IAI47_16815	0.32	-0.8
3,561,302	+		IAI47_16815	0.32	-0.1
3,561,302	+		IAI47_16815	0.32	+0.8
3,561,303	-		IAI47_16815	0.32	+0.0
3,561,303	-		IAI47_16815	0.32	+0.1
3,561,332	-		IAI47_16815	0.38	-1.3
3,561,338	+		IAI47_16815	0.39	-1.0
3,561,419	+		IAI47_16815	0.55	-0.5
3,561,419	+		IAI47_16815	0.55	+0.5
3,561,512	+		IAI47_16815	0.74	-1.3
3,561,513	-		IAI47_16815	0.74	+1.0
3,561,513	-		IAI47_16815	0.74	-0.7
3,561,513	-		IAI47_16815	0.74	+0.5
3,561,547	+		IAI47_16815	0.81	-1.2
3,561,554	+		IAI47_16815	0.82	-0.2
3,561,554	+		IAI47_16815	0.82	+0.8
3,561,554	+		IAI47_16815	0.82	-0.8
3,561,554	+		IAI47_16815	0.82	-0.9
3,561,555	-		IAI47_16815	0.82	-0.8
3,561,555	-		IAI47_16815	0.82	+0.7
3,561,578	-		IAI47_16815	0.87	-0.2
3,561,578	-		IAI47_16815	0.87	-0.7
3,561,578	-		IAI47_16815	0.87	-1.2
3,561,598	+				+0.7
3,561,598	+				+0.5
3,561,599	-				-2.8
3,561,599	-				-0.7
3,561,631	+				-0.3
3,561,631	+				-0.9
3,561,631	+				-0.3
3,561,632	-				-2.0
3,561,640	-				+0.8
3,561,669	+				+1.2
3,561,669	+				-1.5
3,561,670	-				+0.2
3,561,670	-				-0.4
3,561,671	+				+1.0
3,561,671	+				-0.6
3,561,671	+				+0.8
3,561,671	+				+1.2
3,561,671	+				+1.4
3,561,671	+				-0.8
3,561,671	+				-1.4
3,561,671	+				+1.1
3,561,672	-				-0.1
3,561,672	-				+1.1
3,561,672	-				+2.2
3,561,672	-				-0.3
3,561,672	-				+0.5
3,561,672	-				+0.1
3,561,709	+				-0.3
3,561,709	+				-0.8
3,561,748	+				-2.2
3,561,774	+		IAI47_16820	0.12	+1.3
3,561,775	-		IAI47_16820	0.13	+0.8
3,561,784	-		IAI47_16820	0.14	+1.1
3,561,784	-		IAI47_16820	0.14	+0.8
3,561,808	+		IAI47_16820	0.17	+0.3
3,561,808	-		IAI47_16820	0.17	-1.9
3,561,809	-		IAI47_16820	0.17	-0.6
3,561,812	+		IAI47_16820	0.17	-0.2
3,561,812	+		IAI47_16820	0.17	-1.5
3,561,812	+		IAI47_16820	0.17	-1.1
3,561,812	+		IAI47_16820	0.17	+1.6
3,561,813	-		IAI47_16820	0.18	-0.2
3,561,813	-		IAI47_16820	0.18	+1.7
3,561,854	+		IAI47_16820	0.23	+0.5
3,561,855	-		IAI47_16820	0.23	-0.2
3,561,855	-		IAI47_16820	0.23	-1.8
3,561,855	-		IAI47_16820	0.23	+0.8
3,561,855	-		IAI47_16820	0.23	+0.9
3,561,881	+		IAI47_16820	0.27	+0.2
3,561,881	+		IAI47_16820	0.27	-0.9
3,561,882	-		IAI47_16820	0.27	+1.1
3,561,882	-		IAI47_16820	0.27	+0.4
3,561,882	-		IAI47_16820	0.27	+0.9
3,561,926	+		IAI47_16820	0.32	-1.8
3,561,926	+		IAI47_16820	0.32	-0.1
3,561,926	+		IAI47_16820	0.32	+0.1
3,561,926	+		IAI47_16820	0.32	+3.0
3,561,926	+		IAI47_16820	0.32	-0.7
3,561,927	-		IAI47_16820	0.33	+0.2
3,561,927	-		IAI47_16820	0.33	+1.1
3,561,927	-		IAI47_16820	0.33	+0.4
3,561,927	-		IAI47_16820	0.33	-1.8
3,561,927	-		IAI47_16820	0.33	-1.2
3,561,927	-		IAI47_16820	0.33	-0.7
3,562,025	+		IAI47_16820	0.45	-1.3
3,562,026	-		IAI47_16820	0.46	-0.3
3,562,026	-		IAI47_16820	0.46	+2.4
3,562,026	-		IAI47_16820	0.46	+0.7
3,562,047	+		IAI47_16820	0.48	-0.8
3,562,047	+		IAI47_16820	0.48	-0.8
3,562,064	+		IAI47_16820	0.51	-2.0
3,562,064	+		IAI47_16820	0.51	-1.3
3,562,065	-		IAI47_16820	0.51	-0.2
3,562,065	-		IAI47_16820	0.51	-0.9
3,562,086	+		IAI47_16820	0.53	+1.3
3,562,086	+		IAI47_16820	0.53	+0.3
3,562,086	+		IAI47_16820	0.53	+0.8
3,562,087	-		IAI47_16820	0.54	+1.8
3,562,087	-		IAI47_16820	0.54	-1.4
3,562,087	-		IAI47_16820	0.54	-0.4
3,562,167	+		IAI47_16820	0.64	-0.2
3,562,179	+		IAI47_16820	0.66	-0.5
3,562,180	-		IAI47_16820	0.66	+0.9
3,562,209	+		IAI47_16820	0.70	-1.8
3,562,209	+		IAI47_16820	0.70	+0.2
3,562,209	+		IAI47_16820	0.70	-1.3
3,562,220	+		IAI47_16820	0.71	-0.3
3,562,242	+		IAI47_16820	0.74	+0.5
3,562,243	-		IAI47_16820	0.74	-0.1
3,562,271	+		IAI47_16820	0.78	-1.3
3,562,271	+		IAI47_16820	0.78	-1.7
3,562,272	-		IAI47_16820	0.78	-2.0
3,562,272	-		IAI47_16820	0.78	+0.8
3,562,272	-		IAI47_16820	0.78	-0.5
3,562,272	-		IAI47_16820	0.78	+0.2
3,562,272	-		IAI47_16820	0.78	+2.1
3,562,272	-		IAI47_16820	0.78	-0.5
3,562,272	-		IAI47_16820	0.78	-1.9
3,562,272	-		IAI47_16820	0.78	+1.2
3,562,409	+				+0.6
3,562,409	+				+0.3
3,562,410	-				-0.2
3,562,410	-				+2.4
3,562,424	-				-1.6
3,562,424	-				-1.5
3,562,433	+				-1.1
3,562,433	+				-0.3
3,562,433	+				-1.7
3,562,434	-				-0.4
3,562,434	-				-0.4
3,562,434	-				-0.3
3,562,434	-				-0.3
3,562,494	+				-0.8
3,562,494	+				+0.4
3,562,494	+				+0.4
3,562,494	+				-1.9
3,562,495	-				-1.2
3,562,495	-				+2.9
3,562,495	-				-0.2
3,562,495	-				+0.0
3,562,498	+				-0.7
3,562,498	+				+1.8
3,562,499	-				-1.0
3,562,499	-				-0.5
3,562,499	-				-0.8
3,562,508	+				+0.8
3,562,508	+				-0.1
3,562,509	-				-1.9
3,562,514	+				-1.7
3,562,514	+				+1.2
3,562,514	+				-0.4
3,562,515	-				+1.2
3,562,515	-				-0.6
3,562,515	-				+0.9
3,562,579	+		IAI47_16825	0.19	-0.0
3,562,597	+		IAI47_16825	0.24	+0.3
3,562,598	-		IAI47_16825	0.24	-0.5
3,562,598	-		IAI47_16825	0.24	+0.1
3,562,598	-		IAI47_16825	0.24	+0.1
3,562,609	+		IAI47_16825	0.26	+0.0
3,562,609	+		IAI47_16825	0.26	-0.1
3,562,609	+		IAI47_16825	0.26	-1.9
3,562,609	+		IAI47_16825	0.26	-0.2
3,562,609	+		IAI47_16825	0.26	-0.5
3,562,610	-		IAI47_16825	0.27	-0.4
3,562,610	-		IAI47_16825	0.27	+2.3
3,562,610	-		IAI47_16825	0.27	+0.2
3,562,610	-		IAI47_16825	0.27	+0.3
3,562,610	-		IAI47_16825	0.27	-2.5
3,562,610	-		IAI47_16825	0.27	-0.7
3,562,610	-		IAI47_16825	0.27	-0.9
3,562,610	-		IAI47_16825	0.27	-2.4
3,562,610	-		IAI47_16825	0.27	-0.2