Strain Fitness in Pantoea sp. MT58 around IAI47_15285

Experiment: Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
3,221,517	-		IAI47_15280	0.47	-0.1
3,221,837	+		IAI47_15280	0.67	+1.0
3,221,837	+		IAI47_15280	0.67	+0.3
3,221,850	+		IAI47_15280	0.68	-0.2
3,221,850	+		IAI47_15280	0.68	-1.0
3,221,850	+		IAI47_15280	0.68	-1.4
3,221,850	+		IAI47_15280	0.68	+1.7
3,221,850	+		IAI47_15280	0.68	-0.5
3,221,851	-		IAI47_15280	0.68	-1.0
3,221,851	-		IAI47_15280	0.68	+2.7
3,221,851	-		IAI47_15280	0.68	+2.3
3,221,851	-		IAI47_15280	0.68	+1.5
3,221,851	-		IAI47_15280	0.68	+2.0
3,221,891	+		IAI47_15280	0.71	-0.6
3,221,894	+		IAI47_15280	0.71	+1.3
3,221,894	+		IAI47_15280	0.71	-0.1
3,221,894	+		IAI47_15280	0.71	-0.7
3,221,894	+		IAI47_15280	0.71	-0.7
3,221,894	+		IAI47_15280	0.71	+0.6
3,221,895	-		IAI47_15280	0.71	+0.5
3,221,895	-		IAI47_15280	0.71	-1.0
3,221,895	-		IAI47_15280	0.71	-0.2
3,221,895	-		IAI47_15280	0.71	+0.3
3,221,895	-		IAI47_15280	0.71	+0.4
3,221,895	-		IAI47_15280	0.71	+1.0
3,221,941	+		IAI47_15280	0.74	+0.3
3,221,941	+		IAI47_15280	0.74	-0.2
3,221,941	+		IAI47_15280	0.74	-1.7
3,221,942	-		IAI47_15280	0.74	+1.2
3,221,942	-		IAI47_15280	0.74	-1.1
3,221,942	-		IAI47_15280	0.74	+0.7
3,221,976	-		IAI47_15280	0.76	+0.8
3,222,024	+		IAI47_15280	0.79	-0.9
3,222,024	+		IAI47_15280	0.79	-0.5
3,222,024	+		IAI47_15280	0.79	-0.0
3,222,025	-		IAI47_15280	0.79	+0.7
3,222,025	-		IAI47_15280	0.79	-0.0
3,222,025	-		IAI47_15280	0.79	-0.4
3,222,025	-		IAI47_15280	0.79	+1.6
3,222,025	-		IAI47_15280	0.79	+0.5
3,222,103	+		IAI47_15280	0.84	+1.0
3,222,104	-		IAI47_15280	0.84	-0.4
3,222,202	+				+1.0
3,222,205	+				+1.0
3,222,205	+				+0.4
3,222,205	+				+1.2
3,222,205	+				-0.3
3,222,205	+				-0.2
3,222,206	-				+0.1
3,222,206	-				-1.4
3,222,206	-				+1.0
3,222,206	-				-0.0
3,222,329	+				-0.2
3,222,390	+		IAI47_15285	0.13	-1.4
3,222,390	+		IAI47_15285	0.13	+0.7
3,222,390	+		IAI47_15285	0.13	+0.3
3,222,390	+		IAI47_15285	0.13	-0.2
3,222,390	+		IAI47_15285	0.13	-1.0
3,222,390	+		IAI47_15285	0.13	-2.5
3,222,391	-		IAI47_15285	0.14	-1.2
3,222,391	-		IAI47_15285	0.14	-0.8
3,222,391	-		IAI47_15285	0.14	-1.0
3,222,391	-		IAI47_15285	0.14	+0.7
3,222,402	-		IAI47_15285	0.20	-0.9
3,222,412	+		IAI47_15285	0.25	+0.2
3,222,413	-		IAI47_15285	0.26	-1.7
3,222,535	+				-1.1
3,222,535	+				+0.5
3,222,535	+				-0.4
3,222,535	+				+2.4
3,222,535	+				+0.7
3,222,536	-				-0.6
3,222,536	-				-0.4
3,222,536	-				-1.6
3,222,536	-				-0.1
3,222,536	-				-0.2
3,222,536	-				+0.6
3,222,536	-				+0.3
3,222,536	-				-1.0
3,222,536	-				+1.6
3,222,536	-				+0.7
3,222,537	+				+0.4
3,222,537	+				-1.2
3,222,537	+				+2.0
3,222,538	-				-0.4
3,222,538	-				+0.7
3,222,538	-				-1.2
3,222,538	-				+0.9
3,222,538	-				+2.7
3,222,538	-				-2.6
3,222,552	+				-0.4
3,222,553	-				+2.1
3,222,553	-				-1.7
3,222,619	-				-0.2
3,222,652	+				+1.4
3,222,652	+				+2.1
3,222,652	+				+1.3
3,222,653	-				+1.2
3,222,653	-				+1.0
3,222,699	+		IAI47_15290	0.11	-0.7
3,222,699	+		IAI47_15290	0.11	-1.1
3,222,700	-		IAI47_15290	0.11	+1.4
3,222,700	-		IAI47_15290	0.11	-0.4
3,222,700	-		IAI47_15290	0.11	+3.2
3,222,770	+		IAI47_15290	0.16	+1.2
3,222,771	-		IAI47_15290	0.16	-0.3
3,222,926	+		IAI47_15290	0.27	-0.8
3,222,926	+		IAI47_15290	0.27	-0.7
3,222,926	+		IAI47_15290	0.27	+0.7
3,222,926	+		IAI47_15290	0.27	+2.1
3,222,926	+		IAI47_15290	0.27	+1.3
3,222,926	+		IAI47_15290	0.27	-0.1
3,222,926	+		IAI47_15290	0.27	-1.4
3,222,927	-		IAI47_15290	0.27	-0.4
3,222,927	-		IAI47_15290	0.27	-0.8
3,222,927	-		IAI47_15290	0.27	-0.3
3,222,927	-		IAI47_15290	0.27	-1.3
3,222,927	-		IAI47_15290	0.27	-0.9
3,222,927	-		IAI47_15290	0.27	-0.6
3,222,927	-		IAI47_15290	0.27	+0.6
3,222,927	-		IAI47_15290	0.27	+1.3
3,222,927	-				-1.5
3,222,927	-		IAI47_15290	0.27	-1.9
3,222,927	-		IAI47_15290	0.27	+1.1
3,222,927	-		IAI47_15290	0.27	+3.6
3,222,927	-		IAI47_15290	0.27	-0.3
3,222,927	-		IAI47_15290	0.27	-0.4
3,222,927	-		IAI47_15290	0.27	+0.8
3,222,927	-		IAI47_15290	0.27	+0.6
3,222,932	+		IAI47_15290	0.28	+0.6
3,222,933	-		IAI47_15290	0.28	-0.1
3,222,941	-		IAI47_15290	0.28	+0.8
3,222,941	-		IAI47_15290	0.28	-0.7
3,222,959	+		IAI47_15290	0.30	-1.3
3,222,959	+		IAI47_15290	0.30	-1.3
3,223,120	+		IAI47_15290	0.41	-0.6
3,223,120	+		IAI47_15290	0.41	+0.4
3,223,121	-		IAI47_15290	0.41	+2.4
3,223,226	+		IAI47_15290	0.49	-1.5
3,223,226	+		IAI47_15290	0.49	-0.2
3,223,226	+		IAI47_15290	0.49	-1.6
3,223,226	+		IAI47_15290	0.49	+0.4
3,223,227	-		IAI47_15290	0.49	+0.4
3,223,227	-		IAI47_15290	0.49	-2.3
3,223,227	-		IAI47_15290	0.49	-0.3
3,223,465	+		IAI47_15290	0.66	-0.7
3,223,465	+		IAI47_15290	0.66	+0.9
3,223,465	+		IAI47_15290	0.66	-0.6
3,223,466	-		IAI47_15290	0.66	+0.1
3,223,466	-		IAI47_15290	0.66	-0.0
3,223,496	+		IAI47_15290	0.68	+2.7
3,223,496	+		IAI47_15290	0.68	+0.2
3,223,496	+		IAI47_15290	0.68	+0.7
3,223,497	-		IAI47_15290	0.68	-0.8
3,223,497	-		IAI47_15290	0.68	+0.7