Strain Fitness in Pantoea sp. MT58 around IAI47_14680

Experiment: Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
3,096,771	+		IAI47_14675	0.64	+0.9
3,096,772	-		IAI47_14675	0.64	-0.4
3,096,839	+		IAI47_14675	0.68	-0.0
3,096,839	+		IAI47_14675	0.68	-1.5
3,096,840	-		IAI47_14675	0.68	+1.0
3,096,840	-		IAI47_14675	0.68	-1.2
3,096,840	-		IAI47_14675	0.68	-0.7
3,096,840	-		IAI47_14675	0.68	+0.9
3,096,916	+		IAI47_14675	0.73	+0.7
3,096,916	+		IAI47_14675	0.73	+0.7
3,096,916	+		IAI47_14675	0.73	+0.0
3,096,916	+		IAI47_14675	0.73	+0.4
3,096,916	+		IAI47_14675	0.73	-1.9
3,096,916	+		IAI47_14675	0.73	-0.8
3,096,916	+		IAI47_14675	0.73	-1.7
3,096,917	-		IAI47_14675	0.74	+1.4
3,096,917	-		IAI47_14675	0.74	-0.1
3,096,917	-		IAI47_14675	0.74	-0.1
3,096,917	-		IAI47_14675	0.74	+3.1
3,096,917	-		IAI47_14675	0.74	-1.2
3,096,917	-		IAI47_14675	0.74	-0.4
3,096,917	-		IAI47_14675	0.74	+1.5
3,096,971	-		IAI47_14675	0.77	-0.3
3,096,978	+		IAI47_14675	0.78	-0.3
3,096,979	-		IAI47_14675	0.78	-1.2
3,096,983	+		IAI47_14675	0.78	-1.8
3,096,983	+		IAI47_14675	0.78	+2.6
3,096,983	+		IAI47_14675	0.78	+0.7
3,096,984	-		IAI47_14675	0.78	-0.5
3,097,007	+		IAI47_14675	0.80	-2.8
3,097,007	+		IAI47_14675	0.80	+3.0
3,097,008	-		IAI47_14675	0.80	-0.1
3,097,008	-		IAI47_14675	0.80	+0.0
3,097,075	+		IAI47_14675	0.84	+1.0
3,097,075	+		IAI47_14675	0.84	-1.2
3,097,075	+		IAI47_14675	0.84	+1.1
3,097,075	+		IAI47_14675	0.84	-0.6
3,097,075	+		IAI47_14675	0.84	-1.8
3,097,075	+		IAI47_14675	0.84	-1.7
3,097,075	+		IAI47_14675	0.84	+1.0
3,097,075	+		IAI47_14675	0.84	+1.3
3,097,075	+		IAI47_14675	0.84	-1.1
3,097,076	-		IAI47_14675	0.84	-1.0
3,097,076	-		IAI47_14675	0.84	-0.2
3,097,076	-		IAI47_14675	0.84	+0.0
3,097,076	-		IAI47_14675	0.84	-1.5
3,097,076	-		IAI47_14675	0.84	-2.2
3,097,078	+		IAI47_14675	0.84	+0.1
3,097,078	+		IAI47_14675	0.84	-0.6
3,097,078	+		IAI47_14675	0.84	+0.4
3,097,079	-		IAI47_14675	0.84	+1.3
3,097,079	-		IAI47_14675	0.84	+0.4
3,097,101	+		IAI47_14675	0.86	-1.3
3,097,102	-		IAI47_14675	0.86	-1.4
3,097,102	-		IAI47_14675	0.86	-1.2
3,097,148	+		IAI47_14675	0.89	+1.4
3,097,292	+				-0.8
3,097,293	-				+1.2
3,097,309	+				+0.5
3,097,309	+				-1.0
3,097,309	+				-0.1
3,097,309	+				+0.4
3,097,309	+				-2.1
3,097,310	-				-0.2
3,097,310	-				-1.4
3,097,310	-				+0.5
3,097,310	-				+0.8
3,097,310	-				+1.0
3,097,314	-				-0.7
3,097,322	+				+0.6
3,097,322	+				-2.0
3,097,342	+				+0.7
3,097,343	-				+0.3
3,097,343	-				-2.2
3,097,347	+				+1.6
3,097,348	-				+0.6
3,097,361	-				+0.2
3,097,361	-				-1.9
3,097,376	-				+1.4
3,097,388	+				+1.2
3,097,388	+				+0.2
3,097,402	-				+0.1
3,097,407	+				+0.7
3,097,407	+				+0.5
3,097,407	+				+1.0
3,097,407	+				-0.1
3,097,408	-				-1.9
3,097,408	-				-1.5
3,097,408	-				-2.1
3,097,436	+				+1.2
3,097,454	+				-1.1
3,097,459	+				-1.2
3,097,460	-				-0.4
3,097,460	-				-0.0
3,097,510	+				+1.0
3,097,511	-				+0.7
3,097,516	+				+1.3
3,097,517	-				-0.8
3,097,550	+				+1.6
3,097,551	-				+0.2
3,097,571	+				-0.4
3,097,572	-				+0.7
3,097,572	-				-0.0
3,097,601	+				+0.3
3,097,601	+				-1.1
3,097,635	+				-0.0
3,097,636	-				-1.6
3,097,636	-				-0.7
3,097,655	+				-1.1
3,097,655	+				+0.6
3,097,656	-				+0.8
3,097,670	+				-0.5
3,097,690	-				+2.6
3,097,718	+				+0.2
3,097,718	+				+1.0
3,097,728	+				+0.0
3,097,728	+				+1.8
3,097,754	-				-0.0
3,097,767	+				+1.3
3,097,767	+				-0.6
3,097,771	+				-1.4
3,097,777	-				+0.4
3,097,799	+				+2.9
3,097,814	+				+2.2
3,097,815	-				-0.2
3,097,844	+				+0.7
3,097,844	+				-1.6
3,097,845	-				-0.0
3,097,886	+		IAI47_14680	0.14	-0.0
3,097,987	+		IAI47_14680	0.25	+0.4
3,097,987	+		IAI47_14680	0.25	-0.9
3,097,987	+		IAI47_14680	0.25	+2.3
3,097,988	-		IAI47_14680	0.25	-0.7
3,097,995	+		IAI47_14680	0.26	-0.6
3,097,996	-		IAI47_14680	0.26	+0.3
3,098,010	+		IAI47_14680	0.27	+0.4
3,098,011	-		IAI47_14680	0.28	-1.3
3,098,055	+		IAI47_14680	0.32	-1.0
3,098,055	+		IAI47_14680	0.32	-0.9
3,098,056	-		IAI47_14680	0.32	-0.4
3,098,056	-		IAI47_14680	0.32	+1.0
3,098,179	+		IAI47_14680	0.46	-0.2
3,098,251	-		IAI47_14680	0.53	-0.2
3,098,251	-		IAI47_14680	0.53	-0.9
3,098,305	+		IAI47_14680	0.59	+0.9
3,098,306	-		IAI47_14680	0.59	+0.9
3,098,319	+		IAI47_14680	0.61	+0.8
3,098,371	-		IAI47_14680	0.66	-0.5
3,098,493	+		IAI47_14680	0.80	-0.2
3,098,493	+		IAI47_14680	0.80	-0.0
3,098,494	-		IAI47_14680	0.80	-0.2
3,098,494	-		IAI47_14680	0.80	-0.2
3,098,494	-		IAI47_14680	0.80	+0.3
3,098,494	-		IAI47_14680	0.80	+3.0
3,098,496	+		IAI47_14680	0.80	-1.9
3,098,496	+		IAI47_14680	0.80	+2.6
3,098,496	+		IAI47_14680	0.80	+0.6
3,098,496	+		IAI47_14680	0.80	+1.8
3,098,496	+		IAI47_14680	0.80	-0.2
3,098,497	-		IAI47_14680	0.80	+2.6
3,098,497	-		IAI47_14680	0.80	+1.3
3,098,548	+		IAI47_14680	0.85	+2.6
3,098,568	+		IAI47_14680	0.88	-0.0
3,098,569	-		IAI47_14680	0.88	+1.4
3,098,640	+				-0.0
3,098,640	+				+0.6
3,098,640	+				-1.3
3,098,680	+				+1.4
3,098,681	-				+0.1
3,098,681	-				+2.5
3,098,681	-				-0.7
3,098,683	+				-1.0
3,098,684	-				-1.0
3,098,684	-				-0.3
3,098,684	-				-0.6
3,098,684	-				-0.0
3,098,734	+				-0.4
3,098,755	+				-1.0
3,098,763	+				+0.3
3,098,791	+				-0.3
3,098,791	+				-1.0
3,098,791	+				-2.8
3,098,791	+				+1.6
3,098,792	-				-0.7
3,098,792	-				+0.4
3,098,814	-				+1.4
3,098,814	-				+0.6
3,098,860	+				+3.6
3,098,867	+				+1.8
3,098,867	+				+1.9
3,098,867	+				-0.9
3,098,867	+				-0.6
3,098,867	+				-0.7
3,098,867	+				-1.0
3,098,867	+				-0.4
3,098,867	+				-0.2
3,098,867	+				+1.0
3,098,867	+				+1.6
3,098,867	+				+1.3
3,098,867	+				+1.1
3,098,867	+				+0.2
3,098,867	+				-0.3
3,098,868	-				+0.3
3,098,868	-				+2.0
3,098,868	-				-0.6
3,098,868	-				-1.4
3,098,868	-				+1.0
3,098,917	+		IAI47_14685	0.12	+2.9
3,098,917	+		IAI47_14685	0.12	+0.6
3,098,918	-		IAI47_14685	0.12	-0.4
3,098,938	+		IAI47_14685	0.13	-0.5
3,098,939	-		IAI47_14685	0.13	+2.0
3,098,982	-		IAI47_14685	0.15	-1.2
3,098,995	+		IAI47_14685	0.16	+1.6
3,099,013	+		IAI47_14685	0.16	+1.3
3,099,013	+		IAI47_14685	0.16	+3.2
3,099,014	-		IAI47_14685	0.16	+0.5
3,099,014	-		IAI47_14685	0.16	-0.2
3,099,155	-		IAI47_14685	0.24	-0.2
3,099,204	-		IAI47_14685	0.26	+0.3
3,099,204	-		IAI47_14685	0.26	+1.3
3,099,227	+		IAI47_14685	0.27	+1.0
3,099,228	-		IAI47_14685	0.27	+2.0
3,099,228	-		IAI47_14685	0.27	-1.5
3,099,228	-		IAI47_14685	0.27	-1.4
3,099,280	+		IAI47_14685	0.30	-1.5
3,099,280	+		IAI47_14685	0.30	+1.4
3,099,281	-		IAI47_14685	0.30	-0.0
3,099,305	-		IAI47_14685	0.31	+0.2
3,099,458	+		IAI47_14685	0.39	-0.5
3,099,459	-		IAI47_14685	0.39	-0.4
3,099,509	+		IAI47_14685	0.41	-0.4
3,099,509	+		IAI47_14685	0.41	+1.0
3,099,509	+				+3.6
3,099,509	+		IAI47_14685	0.41	+0.7
3,099,509	+		IAI47_14685	0.41	+1.2
3,099,509	+		IAI47_14685	0.41	+0.3
3,099,509	+		IAI47_14685	0.41	+0.6
3,099,510	-		IAI47_14685	0.42	-1.3
3,099,510	-		IAI47_14685	0.42	+2.0
3,099,548	+		IAI47_14685	0.43	-0.9
3,099,548	+		IAI47_14685	0.43	+2.0
3,099,548	+		IAI47_14685	0.43	+0.6
3,099,548	+		IAI47_14685	0.43	+0.9
3,099,548	+		IAI47_14685	0.43	-1.0
3,099,548	+		IAI47_14685	0.43	-0.9
3,099,548	+		IAI47_14685	0.43	-0.4
3,099,548	+		IAI47_14685	0.43	-1.1
3,099,549	-		IAI47_14685	0.43	-1.0
3,099,549	-		IAI47_14685	0.43	+1.1
3,099,549	-		IAI47_14685	0.43	-1.4
3,099,558	+		IAI47_14685	0.44	-0.6
3,099,558	+		IAI47_14685	0.44	+0.3
3,099,558	+		IAI47_14685	0.44	-0.0
3,099,559	-		IAI47_14685	0.44	+0.6
3,099,624	-		IAI47_14685	0.47	+1.1
3,099,624	-		IAI47_14685	0.47	+0.6
3,099,625	+		IAI47_14685	0.47	-1.5
3,099,625	+		IAI47_14685	0.47	-0.0
3,099,625	+		IAI47_14685	0.47	-0.9
3,099,625	+		IAI47_14685	0.47	+0.1
3,099,626	-		IAI47_14685	0.47	-0.7
3,099,626	-		IAI47_14685	0.47	+0.3
3,099,626	-		IAI47_14685	0.47	+2.3
3,099,626	-		IAI47_14685	0.47	-1.6
3,099,626	-		IAI47_14685	0.47	+0.1
3,099,670	+		IAI47_14685	0.50	-0.6
3,099,670	+		IAI47_14685	0.50	+2.9