Strain Fitness in Pantoea sp. MT58 around IAI47_14080

Experiment: Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
2,973,900	+				-1.3
2,973,900	+				-0.5
2,973,900	+				+0.6
2,973,901	-				+1.4
2,973,901	-				+0.1
2,973,961	-				-1.5
2,973,964	+				-1.1
2,974,019	+				-1.7
2,974,019	+				-0.5
2,974,019	+				+1.5
2,974,020	-				+0.0
2,974,020	-				-0.5
2,974,020	-				-1.8
2,974,153	+				+0.2
2,974,153	+				+0.1
2,974,154	-				-0.5
2,974,154	-				+0.9
2,974,159	+				-0.8
2,974,160	-				-0.0
2,974,160	-				-0.2
2,974,169	+				-0.1
2,974,169	+				-1.0
2,974,193	+				+0.6
2,974,193	+				+2.9
2,974,196	+				-1.2
2,974,196	+				-0.4
2,974,196	+				+2.3
2,974,196	+				+1.5
2,974,197	-				-0.0
2,974,214	+				+0.0
2,974,214	+				+1.6
2,974,214	+				-1.7
2,974,214	+				+0.6
2,974,214	+				+0.6
2,974,214	+				+0.5
2,974,214	+				+0.1
2,974,214	+				+0.3
2,974,215	-				-0.5
2,974,224	+				-0.5
2,974,239	+				+1.1
2,974,240	-				-0.3
2,974,240	-				-0.2
2,974,240	-				-0.3
2,974,294	+				+2.2
2,974,294	+				-1.6
2,974,295	-				+0.6
2,974,332	-				-1.7
2,974,439	+				+0.8
2,974,439	+				+0.8
2,974,439	+				-1.5
2,974,439	+				+1.5
2,974,440	-				-0.2
2,974,440	-				+0.9
2,974,485	+				-1.2
2,974,485	+				+2.3
2,974,485	+				+1.5
2,974,485	+				-0.7
2,974,486	-				-1.2
2,974,486	-				+1.9
2,974,486	-				+0.1
2,974,486	-				-1.3
2,974,486	-				+1.3
2,974,486	-				-0.5
2,974,566	+				+0.9
2,974,572	+				-1.5
2,974,573	-				+2.3
2,974,573	-				-1.6
2,974,573	-				+1.8
2,974,594	-				+0.6
2,974,622	+				+0.2
2,974,622	+				+1.4
2,974,622	+				-0.3
2,974,622	+				-0.8
2,974,623	-				-2.0
2,974,623	-				+0.3
2,974,623	-				+0.5
2,974,623	-				-0.9
2,974,638	-				+0.3
2,974,644	+				-0.2
2,974,644	+				-0.2
2,974,644	+				+0.1
2,974,644	+				-0.5
2,974,645	-				+1.0
2,974,645	-				-0.1
2,974,645	-				+0.4
2,974,646	+				-0.4
2,974,646	+				+1.6
2,974,647	-				-0.8
2,974,647	-				+0.4
2,974,647	-				-0.9
2,974,647	-				+0.6
2,974,656	+				-0.0
2,974,656	+				+0.6
2,974,656	+				+1.7
2,974,657	-				+0.2
2,974,660	+				+2.8
2,974,661	-				-0.7
2,974,716	+				+4.4
2,974,716	+				-1.0
2,974,716	+				-1.0
2,974,716	+				-1.8
2,974,716	+				+0.7
2,974,716	+				-0.6
2,974,717	-				-0.3
2,974,717	-				-0.3
2,974,717	-				-1.1
2,974,717	-				-1.8
2,974,776	+				-0.7
2,974,777	-				-0.8
2,974,777	-				-1.2
2,974,822	+				+0.4
2,974,822	+				+0.2
2,974,823	-				-0.5
2,974,857	+				+0.3
2,974,857	+				-0.5
2,974,857	+				-0.4
2,974,857	+				-0.2
2,974,857	+				+1.2
2,974,857	+				+0.4
2,974,858	-				+0.5
2,974,858	-				-1.2
2,974,858	-				+0.5
2,974,858	-				-0.6
2,974,869	+				+1.0
2,974,870	-				-0.4
2,974,870	-				+0.9
2,974,870	-				-2.1
2,974,873	-				-0.8
2,974,873	-				-0.4
2,974,873	-				-1.0
2,974,873	-				-0.0
2,974,873	-				+1.4
2,974,873	-				-1.2
2,974,896	+		IAI47_14080	0.15	-0.4
2,974,896	+		IAI47_14080	0.15	-0.4
2,974,896	+		IAI47_14080	0.15	+0.6
2,974,968	+		IAI47_14080	0.45	+0.2
2,974,968	+		IAI47_14080	0.45	-0.9
2,974,969	-		IAI47_14080	0.45	-0.7
2,974,969	-		IAI47_14080	0.45	-1.7
2,974,990	+		IAI47_14080	0.54	-0.4
2,974,990	+		IAI47_14080	0.54	-0.4
2,974,990	+		IAI47_14080	0.54	+0.9
2,974,990	+		IAI47_14080	0.54	+0.1
2,974,990	+		IAI47_14080	0.54	-1.7
2,974,991	-		IAI47_14080	0.54	-0.7
2,975,010	+		IAI47_14080	0.62	-2.7
2,975,011	-		IAI47_14080	0.62	-0.4
2,975,011	-		IAI47_14080	0.62	-0.4
2,975,020	+		IAI47_14080	0.66	-1.9
2,975,101	+				+3.0
2,975,102	-				-1.3
2,975,115	+				+0.6
2,975,115	+				-0.8
2,975,115	+				+0.3
2,975,116	-				+0.8
2,975,150	+				+1.4
2,975,156	+				+1.3
2,975,157	-				-0.2
2,975,157	-				-0.4
2,975,157	-				+2.6
2,975,157	-				-1.3
2,975,216	+				-1.1
2,975,216	+				-0.9
2,975,216	+				-1.2
2,975,217	-				-0.2
2,975,217	-				+0.4
2,975,266	-				-0.4
2,975,321	+				-0.4
2,975,321	+				+0.3
2,975,322	-				+1.8
2,975,322	-				-1.8
2,975,322	-				+0.1
2,975,421	+		IAI47_14085	0.16	+1.6
2,975,421	+		IAI47_14085	0.16	+0.5
2,975,421	+		IAI47_14085	0.16	-0.7
2,975,454	+		IAI47_14085	0.18	-0.3
2,975,465	-		IAI47_14085	0.19	+0.2
2,975,488	-		IAI47_14085	0.21	-0.1
2,975,488	-		IAI47_14085	0.21	-0.3
2,975,488	-		IAI47_14085	0.21	-0.1
2,975,518	-		IAI47_14085	0.23	+2.7
2,975,560	-		IAI47_14085	0.26	+1.2
2,975,561	+		IAI47_14085	0.26	+1.3
2,975,561	+		IAI47_14085	0.26	+3.4
2,975,561	+		IAI47_14085	0.26	+1.1
2,975,561	+		IAI47_14085	0.26	-0.1
2,975,561	+		IAI47_14085	0.26	+3.4
2,975,561	+		IAI47_14085	0.26	+0.7
2,975,561	+		IAI47_14085	0.26	+1.2
2,975,562	-		IAI47_14085	0.26	+0.9
2,975,562	-		IAI47_14085	0.26	+1.7
2,975,562	-		IAI47_14085	0.26	-1.3
2,975,562	-		IAI47_14085	0.26	+0.6
2,975,562	-		IAI47_14085	0.26	-0.9
2,975,562	-		IAI47_14085	0.26	+0.9
2,975,562	-		IAI47_14085	0.26	+0.2
2,975,562	-		IAI47_14085	0.26	-0.7
2,975,562	-		IAI47_14085	0.26	+0.1
2,975,562	-		IAI47_14085	0.26	-0.6
2,975,562	-		IAI47_14085	0.26	+0.1
2,975,565	+		IAI47_14085	0.27	+0.3
2,975,565	+		IAI47_14085	0.27	+0.8
2,975,565	+		IAI47_14085	0.27	-1.9
2,975,565	+		IAI47_14085	0.27	+0.3
2,975,565	+		IAI47_14085	0.27	+0.6
2,975,565	+		IAI47_14085	0.27	+0.1
2,975,565	+		IAI47_14085	0.27	+0.9
2,975,566	-		IAI47_14085	0.27	-1.3
2,975,566	-		IAI47_14085	0.27	+1.2
2,975,566	-		IAI47_14085	0.27	-1.0
2,975,566	-		IAI47_14085	0.27	+0.7
2,975,569	+		IAI47_14085	0.27	+0.9
2,975,570	-		IAI47_14085	0.27	+0.3
2,975,570	-		IAI47_14085	0.27	-0.7
2,975,595	+		IAI47_14085	0.29	+0.1
2,975,596	-		IAI47_14085	0.29	-1.0
2,975,769	-		IAI47_14085	0.42	-0.2
2,975,839	+		IAI47_14085	0.47	+0.3
2,975,839	+		IAI47_14085	0.47	-0.3
2,975,906	+		IAI47_14085	0.52	+0.6
2,975,906	+		IAI47_14085	0.52	-0.6
2,975,906	+		IAI47_14085	0.52	+3.2
2,975,906	+		IAI47_14085	0.52	-1.9
2,975,907	-		IAI47_14085	0.53	-1.0
2,975,907	-		IAI47_14085	0.53	-0.2
2,975,907	-		IAI47_14085	0.53	+1.1
2,975,907	-		IAI47_14085	0.53	+0.8
2,975,907	-		IAI47_14085	0.53	-2.0
2,975,928	+		IAI47_14085	0.54	-0.9
2,975,934	+		IAI47_14085	0.55	+1.0
2,975,986	-		IAI47_14085	0.59	+0.6
2,976,015	+		IAI47_14085	0.61	-0.8
2,976,015	+		IAI47_14085	0.61	+0.4
2,976,015	+		IAI47_14085	0.61	+0.1
2,976,015	+		IAI47_14085	0.61	-0.5
2,976,016	-		IAI47_14085	0.61	+2.3
2,976,016	-		IAI47_14085	0.61	-0.2
2,976,030	+		IAI47_14085	0.62	-0.2