Strain Fitness in Pantoea sp. MT58 around IAI47_12225

Experiment: Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
2,584,278	+		IAI47_12215	0.51	-0.2
2,584,278	+		IAI47_12215	0.51	-0.1
2,584,278	+		IAI47_12215	0.51	+0.9
2,584,278	+		IAI47_12215	0.51	+0.4
2,584,279	-		IAI47_12215	0.51	-0.9
2,584,300	+		IAI47_12215	0.53	-0.8
2,584,300	+		IAI47_12215	0.53	+1.0
2,584,300	+		IAI47_12215	0.53	+0.3
2,584,301	-		IAI47_12215	0.54	+3.7
2,584,301	-		IAI47_12215	0.54	+1.3
2,584,301	-		IAI47_12215	0.54	+2.4
2,584,371	+		IAI47_12215	0.60	+1.7
2,584,371	+		IAI47_12215	0.60	+0.4
2,584,371	+		IAI47_12215	0.60	+0.4
2,584,371	+		IAI47_12215	0.60	+1.2
2,584,372	-		IAI47_12215	0.60	-1.9
2,584,372	-		IAI47_12215	0.60	+0.1
2,584,372	-		IAI47_12215	0.60	+2.2
2,584,372	-		IAI47_12215	0.60	+0.1
2,584,372	-		IAI47_12215	0.60	+1.7
2,584,372	-		IAI47_12215	0.60	+1.1
2,584,372	-		IAI47_12215	0.60	-0.4
2,584,372	-		IAI47_12215	0.60	-2.0
2,584,372	-		IAI47_12215	0.60	+0.6
2,584,372	-		IAI47_12215	0.60	-0.8
2,584,402	+		IAI47_12215	0.63	-1.3
2,584,402	+		IAI47_12215	0.63	-0.2
2,584,403	-		IAI47_12215	0.63	+1.3
2,584,403	-		IAI47_12215	0.63	-0.1
2,584,403	-		IAI47_12215	0.63	-0.3
2,584,419	+		IAI47_12215	0.65	+0.5
2,584,449	+		IAI47_12215	0.68	+1.5
2,584,450	-		IAI47_12215	0.68	+1.0
2,584,450	-		IAI47_12215	0.68	-0.3
2,584,450	-		IAI47_12215	0.68	+0.1
2,584,457	+		IAI47_12215	0.68	-0.6
2,584,457	+		IAI47_12215	0.68	+0.2
2,584,458	-		IAI47_12215	0.69	+1.1
2,584,458	-		IAI47_12215	0.69	+2.4
2,584,551	+		IAI47_12215	0.77	-0.6
2,584,551	+		IAI47_12215	0.77	-0.8
2,584,551	+		IAI47_12215	0.77	-1.2
2,584,552	-		IAI47_12215	0.78	+1.1
2,584,552	-		IAI47_12215	0.78	+0.4
2,584,576	+		IAI47_12215	0.80	+0.0
2,584,652	-		IAI47_12215	0.87	-0.6
2,584,680	+		IAI47_12215	0.90	-0.8
2,584,681	-				+2.2
2,584,681	-				+1.3
2,584,790	-				+1.6
2,584,790	-				+2.4
2,584,844	+				+0.1
2,584,844	+				+0.0
2,584,844	+				-0.9
2,584,845	-				-0.0
2,584,847	+				-0.2
2,584,847	+				+0.8
2,584,848	-				-0.1
2,584,848	-				-1.0
2,584,848	-				+2.2
2,584,848	-				+1.3
2,584,862	+				-0.3
2,584,863	-				-1.6
2,584,922	-		IAI47_12220	0.30	+0.7
2,584,972	+		IAI47_12220	0.50	-0.1
2,584,972	+		IAI47_12220	0.50	-0.3
2,584,972	+		IAI47_12220	0.50	-0.5
2,584,973	-		IAI47_12220	0.51	-0.1
2,584,973	-		IAI47_12220	0.51	+2.3
2,584,973	-		IAI47_12220	0.51	-0.8
2,584,973	-		IAI47_12220	0.51	-1.1
2,584,973	-		IAI47_12220	0.51	-0.5
2,584,991	+		IAI47_12220	0.58	+1.5
2,584,992	-		IAI47_12220	0.59	-0.3
2,584,992	-		IAI47_12220	0.59	-1.7
2,585,084	+				+0.4
2,585,085	-				+1.0
2,585,085	-				+1.7
2,585,137	+				+1.5
2,585,176	+				-0.7
2,585,176	+				+1.8
2,585,176	+				+2.0
2,585,177	-				-1.2
2,585,185	-				-1.2
2,585,185	-				+1.7
2,585,199	+				+2.0
2,585,221	-				-1.1
2,585,243	+				+1.1
2,585,243	+				+1.2
2,585,244	-				-0.5
2,585,249	+				-0.6
2,585,249	+				+0.4
2,585,250	-				-0.7
2,585,281	+		IAI47_12225	0.16	-0.7
2,585,281	+		IAI47_12225	0.16	+1.6
2,585,281	+		IAI47_12225	0.16	+1.3
2,585,281	+		IAI47_12225	0.16	-0.5
2,585,282	-		IAI47_12225	0.16	-1.3
2,585,282	-		IAI47_12225	0.16	+0.2
2,585,282	-		IAI47_12225	0.16	-0.9
2,585,282	-		IAI47_12225	0.16	-0.1
2,585,282	-		IAI47_12225	0.16	+2.9
2,585,284	+		IAI47_12225	0.17	+2.0
2,585,284	+		IAI47_12225	0.17	-0.7
2,585,284	+		IAI47_12225	0.17	+1.8
2,585,284	+		IAI47_12225	0.17	+1.0
2,585,285	-		IAI47_12225	0.17	-1.2
2,585,508	+				-1.5
2,585,509	-				-2.2
2,585,509	-				+0.4
2,585,509	-				-0.8
2,585,509	-				+2.0
2,585,509	-				-0.5
2,585,509	-				+0.8
2,585,522	+				+0.9
2,585,522	+				+0.8
2,585,522	+				-0.5
2,585,523	-				-0.1
2,585,523	-				+1.5
2,585,553	+				-1.1
2,585,553	+				-0.7
2,585,554	-				+2.2
2,585,560	+				+1.7
2,585,560	+				-0.9
2,585,560	+				+0.1
2,585,561	-				+0.9
2,585,616	+				+1.0
2,585,616	+				-1.0
2,585,616	+				+1.8
2,585,616	+				-0.5
2,585,647	+				+0.4
2,585,668	+				+1.5
2,585,676	+				+0.8
2,585,677	-				+0.4
2,585,677	-				-1.6
2,585,680	-				+4.3
2,585,680	-				+0.4
2,585,680	-				-1.3
2,585,680	-				+1.1
2,585,697	-				-0.1
2,585,697	-				+0.7
2,585,733	+				+0.9
2,585,734	-				-0.4
2,585,734	-				-0.4
2,585,740	+				+1.1
2,585,740	+				-0.7
2,585,740	+				+3.7
2,585,740	+				-0.1
2,585,740	+				-0.8
2,585,740	+				-0.0
2,585,741	-				-0.0
2,585,741	-				-0.4
2,585,743	+				-0.2
2,585,743	+				-0.2
2,585,743	+				+1.4
2,585,744	-				+1.7
2,585,744	-				-0.3
2,585,744	-				-1.6
2,585,752	+				+0.1
2,585,752	+				+2.5
2,585,752	+				-0.3
2,585,752	+				+1.3
2,585,753	-				-1.4
2,585,753	-				+0.4
2,585,754	+				+0.3
2,585,754	+				-1.2
2,585,754	+				-1.2
2,585,754	+				-1.0
2,585,754	+				-1.3
2,585,754	+				+0.0
2,585,755	-				-0.6
2,585,755	-				-0.6
2,585,755	-				+0.8
2,585,776	+				-0.5
2,585,806	+		IAI47_12230	0.20	+2.1
2,585,806	+		IAI47_12230	0.20	+0.7
2,585,812	+		IAI47_12230	0.22	+1.3
2,585,821	+		IAI47_12230	0.25	-1.4
2,585,821	+		IAI47_12230	0.25	+0.1
2,585,821	+		IAI47_12230	0.25	+0.9
2,585,821	+		IAI47_12230	0.25	-0.1
2,585,822	-		IAI47_12230	0.26	-0.8
2,585,822	-		IAI47_12230	0.26	-2.6
2,585,822	-		IAI47_12230	0.26	-0.0
2,585,822	-		IAI47_12230	0.26	-0.2
2,585,825	+		IAI47_12230	0.27	+1.0
2,585,825	+		IAI47_12230	0.27	+1.3
2,585,825	+		IAI47_12230	0.27	-1.0
2,585,825	+		IAI47_12230	0.27	-0.4
2,585,825	+		IAI47_12230	0.27	-2.6
2,585,825	+		IAI47_12230	0.27	+3.5
2,585,825	+		IAI47_12230	0.27	-1.1
2,585,825	+		IAI47_12230	0.27	-1.4
2,585,826	-		IAI47_12230	0.27	+1.7
2,585,826	-		IAI47_12230	0.27	-1.2
2,585,826	-		IAI47_12230	0.27	+0.4
2,585,826	-		IAI47_12230	0.27	-1.1
2,585,826	-		IAI47_12230	0.27	+1.5
2,585,826	-		IAI47_12230	0.27	-0.5
2,585,899	+		IAI47_12230	0.56	+0.3
2,585,899	+		IAI47_12230	0.56	-0.6
2,585,900	-		IAI47_12230	0.56	-0.3
2,585,903	+		IAI47_12230	0.58	-0.6
2,585,903	+		IAI47_12230	0.58	-2.1
2,585,903	+		IAI47_12230	0.58	-0.9
2,585,903	+		IAI47_12230	0.58	-0.8
2,585,904	-		IAI47_12230	0.58	+0.5
2,585,904	-		IAI47_12230	0.58	-0.2
2,585,904	-		IAI47_12230	0.58	+0.3
2,585,904	-		IAI47_12230	0.58	-0.3
2,585,904	-		IAI47_12230	0.58	+1.0
2,585,904	-		IAI47_12230	0.58	-1.0
2,585,935	+		IAI47_12230	0.70	+0.5
2,585,936	-		IAI47_12230	0.71	+3.3
2,585,936	-		IAI47_12230	0.71	+0.5
2,585,968	-		IAI47_12230	0.83	-0.9
2,585,968	-		IAI47_12230	0.83	+1.3
2,585,968	-		IAI47_12230	0.83	+0.6
2,585,968	-		IAI47_12230	0.83	-0.6
2,585,968	-		IAI47_12230	0.83	+0.4
2,585,968	-		IAI47_12230	0.83	-1.8
2,585,968	-		IAI47_12230	0.83	+0.9
2,585,986	-				-0.7
2,586,002	-				+1.0
2,586,002	-				-0.6
2,586,009	-				+0.5
2,586,009	-				+0.7
2,586,079	+				+2.3
2,586,080	-				-0.0
2,586,084	+				-0.3
2,586,084	+				-1.3
2,586,084	+				-0.1
2,586,090	+				+0.4
2,586,091	-				-0.1
2,586,101	+				+2.5
2,586,101	+				+1.2
2,586,101	+				-0.7
2,586,101	+				+0.8
2,586,102	-				+1.4
2,586,111	+				+0.2
2,586,111	+				-0.0
2,586,111	+				+0.1
2,586,112	-				+0.7
2,586,119	+				+0.1
2,586,160	-				-1.5
2,586,160	-				+2.1
2,586,160	-				+0.6
2,586,162	+				-2.0
2,586,162	+				+0.4
2,586,162	+				+2.7
2,586,162	+				-1.8
2,586,162	+				+1.1
2,586,162	+				+1.1
2,586,162	+				+1.8
2,586,162	+				+2.9
2,586,162	+				+0.4
2,586,162	+				-0.0
2,586,163	-				+4.4
2,586,163	-				-2.9
2,586,163	-				+0.7
2,586,163	-				-0.3
2,586,163	-				+0.3
2,586,163	-				-1.4
2,586,163	-				+2.7
2,586,163	-				-1.6
2,586,163	-				-1.0
2,586,163	-				-2.2
2,586,163	-				+0.6
2,586,163	-				-0.5
2,586,168	-				+0.9
2,586,168	-				-0.6
2,586,168	-				+0.7
2,586,181	+				+1.5
2,586,182	-				+0.8
2,586,264	+		IAI47_12235	0.14	-1.7
2,586,264	+		IAI47_12235	0.14	+0.1
2,586,265	-		IAI47_12235	0.14	-0.2
2,586,265	-		IAI47_12235	0.14	-1.1
2,586,282	+		IAI47_12235	0.16	-0.7
2,586,282	+		IAI47_12235	0.16	-0.2
2,586,282	+		IAI47_12235	0.16	-1.9
2,586,282	+		IAI47_12235	0.16	-0.8
2,586,283	-		IAI47_12235	0.16	+1.2
2,586,283	-		IAI47_12235	0.16	-1.8
2,586,283	-		IAI47_12235	0.16	+0.4
2,586,350	+		IAI47_12235	0.22	+0.1
2,586,350	+		IAI47_12235	0.22	+1.3
2,586,350	+		IAI47_12235	0.22	-0.6
2,586,350	+		IAI47_12235	0.22	+0.1
2,586,351	-		IAI47_12235	0.22	-0.3
2,586,351	-		IAI47_12235	0.22	+1.0
2,586,351	-		IAI47_12235	0.22	+1.4
2,586,367	+		IAI47_12235	0.24	-0.6
2,586,368	-		IAI47_12235	0.24	-2.1
2,586,371	+		IAI47_12235	0.24	+0.7
2,586,371	+		IAI47_12235	0.24	-0.4
2,586,372	-		IAI47_12235	0.24	-1.5
2,586,372	-		IAI47_12235	0.24	-1.7
2,586,372	-		IAI47_12235	0.24	+0.8
2,586,372	-		IAI47_12235	0.24	+0.7
2,586,398	+		IAI47_12235	0.26	-1.0
2,586,448	+		IAI47_12235	0.31	+0.6
2,586,448	+		IAI47_12235	0.31	+2.7
2,586,448	+		IAI47_12235	0.31	-0.2
2,586,448	+		IAI47_12235	0.31	+0.3
2,586,448	+		IAI47_12235	0.31	+1.3
2,586,449	-		IAI47_12235	0.31	-0.5
2,586,449	-		IAI47_12235	0.31	+0.9
2,586,449	-		IAI47_12235	0.31	+0.4
2,586,449	-		IAI47_12235	0.31	-1.3
2,586,504	+		IAI47_12235	0.36	-1.2
2,586,504	+		IAI47_12235	0.36	+1.0
2,586,504	+		IAI47_12235	0.36	+2.4