Strain Fitness in Pantoea sp. MT58 around IAI47_09455

Experiment: Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
1,994,943	+				-0.8
1,994,943	+				+0.5
1,994,944	-				+0.4
1,994,944	-				+1.2
1,994,944	-				-1.7
1,994,956	+				-0.0
1,994,987	+				+1.8
1,995,061	+		IAI47_09450	0.12	-1.1
1,995,061	+		IAI47_09450	0.12	-1.4
1,995,062	-		IAI47_09450	0.12	+0.5
1,995,062	-		IAI47_09450	0.12	-0.2
1,995,088	-		IAI47_09450	0.14	-0.4
1,995,096	+		IAI47_09450	0.15	+0.2
1,995,096	+		IAI47_09450	0.15	+1.0
1,995,096	+		IAI47_09450	0.15	-0.6
1,995,096	+		IAI47_09450	0.15	+1.9
1,995,096	+		IAI47_09450	0.15	+1.3
1,995,097	-		IAI47_09450	0.15	-0.3
1,995,178	+		IAI47_09450	0.24	-0.9
1,995,178	+		IAI47_09450	0.24	+0.3
1,995,178	+		IAI47_09450	0.24	-0.7
1,995,178	+		IAI47_09450	0.24	-1.4
1,995,179	-		IAI47_09450	0.24	+1.1
1,995,179	-		IAI47_09450	0.24	-0.3
1,995,179	-		IAI47_09450	0.24	-1.6
1,995,329	+		IAI47_09450	0.39	+1.2
1,995,330	-		IAI47_09450	0.39	+0.4
1,995,395	+		IAI47_09450	0.46	+0.7
1,995,395	+		IAI47_09450	0.46	+0.2
1,995,417	-		IAI47_09450	0.48	+0.0
1,995,417	-		IAI47_09450	0.48	-0.3
1,995,559	+		IAI47_09450	0.62	+0.0
1,995,559	+		IAI47_09450	0.62	-0.6
1,995,559	+		IAI47_09450	0.62	-0.2
1,995,560	-		IAI47_09450	0.62	+0.0
1,995,560	-		IAI47_09450	0.62	-1.5
1,995,594	-		IAI47_09450	0.66	-0.7
1,995,632	+		IAI47_09450	0.70	+0.5
1,995,632	+		IAI47_09450	0.70	-0.8
1,995,632	+		IAI47_09450	0.70	-0.5
1,995,633	-		IAI47_09450	0.70	-0.3
1,995,633	-		IAI47_09450	0.70	-3.0
1,995,667	-		IAI47_09450	0.73	+0.7
1,995,667	-		IAI47_09450	0.73	+3.5
1,995,692	+		IAI47_09450	0.76	+2.5
1,995,793	+		IAI47_09450	0.86	-1.7
1,995,793	+		IAI47_09450	0.86	+2.5
1,995,794	-		IAI47_09450	0.86	+0.4
1,995,905	+				+2.5
1,995,905	+				+0.7
1,995,927	+				-0.1
1,995,927	+				+1.0
1,995,927	+				+1.5
1,995,927	+				-0.2
1,995,927	+				-0.9
1,995,927	+				+1.1
1,995,928	-				-1.4
1,995,928	-				-1.1
1,995,928	-				+0.2
1,995,928	-				-0.3
1,995,944	+				+0.5
1,995,945	-				-1.4
1,996,013	+		IAI47_09455	0.15	+1.2
1,996,013	+		IAI47_09455	0.15	-0.6
1,996,013	+		IAI47_09455	0.15	+1.6
1,996,013	+		IAI47_09455	0.15	+0.0
1,996,125	+		IAI47_09455	0.31	+1.1
1,996,125	+		IAI47_09455	0.31	+1.5
1,996,126	-		IAI47_09455	0.31	-0.4
1,996,126	-		IAI47_09455	0.31	-0.4
1,996,168	-		IAI47_09455	0.37	+0.9
1,996,177	+		IAI47_09455	0.39	+2.3
1,996,177	+		IAI47_09455	0.39	+0.8
1,996,178	-		IAI47_09455	0.39	-0.8
1,996,178	-		IAI47_09455	0.39	-0.1
1,996,178	-		IAI47_09455	0.39	+2.2
1,996,178	-		IAI47_09455	0.39	-0.1
1,996,178	-		IAI47_09455	0.39	+1.1
1,996,553	+				-0.9
1,996,554	-				+0.5
1,996,612	-				+0.2
1,996,612	-				-1.4
1,996,612	-				-1.6
1,996,612	-				+0.9
1,996,634	-				+1.1
1,996,634	-				+0.9
1,996,668	-				-1.4
1,996,668	-				+0.3
1,996,671	+				-1.1
1,996,671	+				+1.2
1,996,671	+				+0.7
1,996,671	+				-0.4
1,996,672	-				-0.1
1,996,672	-				-0.5
1,996,672	-				-0.6
1,996,672	-				+1.8
1,996,672	-				+1.7
1,996,672	-				-0.8
1,996,672	-				+1.1
1,996,672	-				+0.1
1,996,675	+				+0.0
1,996,675	+				+0.3
1,996,675	+				+1.5
1,996,675	+				+1.1
1,996,675	+				+1.5
1,996,676	-				+0.7
1,996,696	-				-2.5
1,996,714	+				-0.6
1,996,714	+				-0.5
1,996,726	-				+0.7
1,996,752	-				-0.8
1,996,763	-				+0.3
1,996,770	-				-0.6
1,996,781	+				-1.6
1,996,840	+				+0.9
1,996,886	+				+1.1
1,996,887	-				+0.9
1,996,887	-				-2.1
1,996,889	+				-0.7
1,996,889	+				-2.6
1,996,889	+				+0.1
1,996,889	+				-0.4
1,996,890	-				-0.0
1,996,928	-		IAI47_09460	0.10	+1.2
1,997,115	+		IAI47_09460	0.22	+1.5
1,997,116	-		IAI47_09460	0.22	+0.4
1,997,403	+		IAI47_09460	0.39	+1.5
1,997,404	-		IAI47_09460	0.40	+0.2
1,997,404	-		IAI47_09460	0.40	-0.6
1,997,404	-		IAI47_09460	0.40	-0.7
1,997,451	-		IAI47_09460	0.42	-0.2
1,997,460	+		IAI47_09460	0.43	-2.1
1,997,460	+		IAI47_09460	0.43	-1.2
1,997,531	+		IAI47_09460	0.47	-1.8
1,997,558	+		IAI47_09460	0.49	+1.4
1,997,558	+		IAI47_09460	0.49	+0.8
1,997,586	+		IAI47_09460	0.51	-0.3
1,997,586	+		IAI47_09460	0.51	+1.9
1,997,586	+		IAI47_09460	0.51	+0.3
1,997,586	+		IAI47_09460	0.51	-1.1
1,997,586	+		IAI47_09460	0.51	+0.4
1,997,586	+		IAI47_09460	0.51	-0.1
1,997,586	+		IAI47_09460	0.51	-0.3
1,997,586	+		IAI47_09460	0.51	-0.6
1,997,586	+		IAI47_09460	0.51	+1.3
1,997,586	+		IAI47_09460	0.51	-0.1
1,997,586	+		IAI47_09460	0.51	-0.3
1,997,586	+		IAI47_09460	0.51	+1.5
1,997,586	+		IAI47_09460	0.51	+1.4
1,997,587	-		IAI47_09460	0.51	-0.1
1,997,587	-		IAI47_09460	0.51	+0.9
1,997,587	-		IAI47_09460	0.51	-1.4
1,997,587	-		IAI47_09460	0.51	-0.9
1,997,587	-		IAI47_09460	0.51	-0.1
1,997,587	-		IAI47_09460	0.51	-1.0
1,997,587	-		IAI47_09460	0.51	-1.5
1,997,587	-		IAI47_09460	0.51	-0.9
1,997,587	-		IAI47_09460	0.51	+1.6
1,997,587	-		IAI47_09460	0.51	+1.6
1,997,587	-		IAI47_09460	0.51	-1.0
1,997,587	-		IAI47_09460	0.51	-0.1
1,997,587	-		IAI47_09460	0.51	-1.1
1,997,587	-		IAI47_09460	0.51	-0.9
1,997,587	-		IAI47_09460	0.51	-0.1
1,997,587	-		IAI47_09460	0.51	+0.9
1,997,596	+		IAI47_09460	0.51	+0.9