Strain Fitness in Pantoea sp. MT58 around IAI47_09420

Experiment: Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
1,987,622	+		IAI47_09415	0.32	-0.6
1,987,772	+		IAI47_09415	0.42	-1.9
1,987,773	-		IAI47_09415	0.43	-2.2
1,987,773	-		IAI47_09415	0.43	-2.0
1,987,773	-		IAI47_09415	0.43	-3.9
1,987,773	-		IAI47_09415	0.43	+1.1
1,987,786	+		IAI47_09415	0.43	-2.5
1,987,807	+		IAI47_09415	0.45	-1.9
1,987,841	-		IAI47_09415	0.47	-1.9
1,987,930	+		IAI47_09415	0.54	-2.6
1,987,930	+		IAI47_09415	0.54	-2.2
1,987,930	+		IAI47_09415	0.54	-2.1
1,987,930	+		IAI47_09415	0.54	-1.3
1,987,957	+		IAI47_09415	0.56	-0.5
1,987,961	+		IAI47_09415	0.56	-3.0
1,987,961	+		IAI47_09415	0.56	-1.6
1,987,962	-		IAI47_09415	0.56	-2.8
1,987,962	-		IAI47_09415	0.56	-1.9
1,987,962	-		IAI47_09415	0.56	-0.0
1,987,962	-		IAI47_09415	0.56	-2.3
1,987,964	+		IAI47_09415	0.56	-2.2
1,987,964	+		IAI47_09415	0.56	-0.4
1,987,965	-		IAI47_09415	0.56	-0.3
1,987,965	-		IAI47_09415	0.56	-1.8
1,987,991	+		IAI47_09415	0.58	-1.9
1,988,056	+		IAI47_09415	0.63	-3.8
1,988,056	+		IAI47_09415	0.63	-1.7
1,988,056	+		IAI47_09415	0.63	+0.2
1,988,056	+		IAI47_09415	0.63	-1.2
1,988,056	+		IAI47_09415	0.63	+0.2
1,988,056	+		IAI47_09415	0.63	+0.5
1,988,057	-		IAI47_09415	0.63	-0.6
1,988,074	+		IAI47_09415	0.64	-0.8
1,988,074	+		IAI47_09415	0.64	-1.5
1,988,074	+		IAI47_09415	0.64	+1.0
1,988,075	-		IAI47_09415	0.64	-0.0
1,988,075	-		IAI47_09415	0.64	-2.3
1,988,080	+		IAI47_09415	0.65	-1.4
1,988,080	+		IAI47_09415	0.65	-2.2
1,988,081	-		IAI47_09415	0.65	-1.2
1,988,081	-		IAI47_09415	0.65	-0.8
1,988,081	-		IAI47_09415	0.65	-0.6
1,988,172	+		IAI47_09415	0.71	-2.4
1,988,172	+		IAI47_09415	0.71	-1.6
1,988,172	+		IAI47_09415	0.71	-0.7
1,988,189	-		IAI47_09415	0.72	-1.0
1,988,189	-		IAI47_09415	0.72	-2.3
1,988,287	+		IAI47_09415	0.79	-2.9
1,988,287	+		IAI47_09415	0.79	-2.0
1,988,287	+		IAI47_09415	0.79	-1.4
1,988,288	-		IAI47_09415	0.79	-1.0
1,988,288	-		IAI47_09415	0.79	-2.3
1,988,288	-		IAI47_09415	0.79	-1.6
1,988,405	-		IAI47_09415	0.88	+0.2
1,988,411	+		IAI47_09415	0.88	-2.5
1,988,412	-		IAI47_09415	0.88	-1.7
1,988,412	-		IAI47_09415	0.88	+1.5
1,988,563	+				-1.4
1,988,712	-		IAI47_09420	0.13	-0.2
1,988,891	+		IAI47_09420	0.30	-4.0
1,988,904	+		IAI47_09420	0.31	-2.0
1,988,904	+		IAI47_09420	0.31	-1.6
1,988,904	+		IAI47_09420	0.31	-0.3
1,988,904	+		IAI47_09420	0.31	-2.5
1,988,904	+		IAI47_09420	0.31	-1.2
1,988,904	+		IAI47_09420	0.31	-1.2
1,988,904	+		IAI47_09420	0.31	-1.3
1,988,905	-		IAI47_09420	0.31	-1.0
1,988,905	-		IAI47_09420	0.31	-3.1
1,988,905	-		IAI47_09420	0.31	-1.2
1,988,905	-		IAI47_09420	0.31	-1.3
1,988,905	-		IAI47_09420	0.31	-1.7
1,988,954	-		IAI47_09420	0.36	-1.5
1,988,999	+		IAI47_09420	0.40	-2.9
1,988,999	+		IAI47_09420	0.40	+0.5
1,988,999	+		IAI47_09420	0.40	-1.5
1,989,000	-		IAI47_09420	0.40	-1.7
1,989,000	-		IAI47_09420	0.40	-0.3
1,989,000	-		IAI47_09420	0.40	-0.5
1,989,145	+		IAI47_09420	0.54	-2.3
1,989,145	+		IAI47_09420	0.54	-2.0
1,989,145	+		IAI47_09420	0.54	-1.3
1,989,146	-		IAI47_09420	0.54	-2.1
1,989,146	-		IAI47_09420	0.54	-2.4
1,989,146	-		IAI47_09420	0.54	-3.3
1,989,146	-		IAI47_09420	0.54	-4.0
1,989,146	-		IAI47_09420	0.54	-1.6
1,989,255	+		IAI47_09420	0.64	-0.8
1,989,256	-		IAI47_09420	0.64	-0.2
1,989,276	+		IAI47_09420	0.66	-2.1
1,989,277	-		IAI47_09420	0.66	-1.0
1,989,308	+		IAI47_09420	0.69	-3.0
1,989,310	+		IAI47_09420	0.69	-1.9
1,989,310	+		IAI47_09420	0.69	-0.5
1,989,310	+		IAI47_09420	0.69	-2.6
1,989,310	+		IAI47_09420	0.69	-0.0
1,989,310	+		IAI47_09420	0.69	-2.8
1,989,310	+		IAI47_09420	0.69	-1.3
1,989,310	+		IAI47_09420	0.69	-2.2
1,989,310	+		IAI47_09420	0.69	-1.9
1,989,311	-		IAI47_09420	0.70	-1.7
1,989,311	-		IAI47_09420	0.70	-1.0
1,989,311	-		IAI47_09420	0.70	-1.8
1,989,311	-		IAI47_09420	0.70	-1.9
1,989,328	+		IAI47_09420	0.71	-3.5
1,989,328	+		IAI47_09420	0.71	-2.6
1,989,329	-		IAI47_09420	0.71	-1.3
1,989,549	+				-1.6
1,989,650	+				-1.4
1,989,650	+				+0.1
1,989,650	+				-2.3
1,989,650	+				-1.6
1,989,650	+				+2.3
1,989,651	-				-0.2
1,989,651	-				+0.0
1,989,671	+				-1.0
1,989,672	-				+1.4
1,989,748	+				+0.2
1,989,748	+				+2.5
1,989,749	-				+0.1
1,989,749	-				-1.5
1,989,799	+				-1.6
1,989,832	+		IAI47_09425	0.11	+0.7
1,989,832	+		IAI47_09425	0.11	-1.6
1,989,832	+		IAI47_09425	0.11	-1.1
1,989,833	-		IAI47_09425	0.11	+0.5
1,989,833	-		IAI47_09425	0.11	-3.0
1,989,833	-		IAI47_09425	0.11	+0.1
1,989,833	-		IAI47_09425	0.11	-1.0
1,989,833	-		IAI47_09425	0.11	+0.5
1,989,833	-		IAI47_09425	0.11	+1.7
1,989,833	-		IAI47_09425	0.11	-1.3
1,989,833	-		IAI47_09425	0.11	+1.7
1,989,833	-		IAI47_09425	0.11	-0.5
1,989,833	-		IAI47_09425	0.11	+0.3
1,989,833	-		IAI47_09425	0.11	+0.7
1,989,833	-		IAI47_09425	0.11	+0.0
1,989,833	-		IAI47_09425	0.11	-0.6
1,989,861	+		IAI47_09425	0.13	+0.8
1,989,861	+		IAI47_09425	0.13	-0.0
1,989,861	+		IAI47_09425	0.13	-0.7
1,989,861	+		IAI47_09425	0.13	+2.5
1,989,862	-		IAI47_09425	0.13	-0.3
1,989,862	-		IAI47_09425	0.13	+0.1
1,989,862	-		IAI47_09425	0.13	-0.0
1,989,891	+		IAI47_09425	0.15	+1.5
1,989,892	-		IAI47_09425	0.15	-0.7
1,989,892	-		IAI47_09425	0.15	+2.1
1,989,892	-		IAI47_09425	0.15	-0.9
1,989,912	+		IAI47_09425	0.17	-1.7
1,989,912	+		IAI47_09425	0.17	+0.4
1,989,912	+		IAI47_09425	0.17	-1.9
1,989,913	-		IAI47_09425	0.17	+0.8
1,989,913	-		IAI47_09425	0.17	+1.2
1,989,980	-		IAI47_09425	0.21	+0.2
1,990,007	+		IAI47_09425	0.23	+1.5
1,990,007	+		IAI47_09425	0.23	-1.7
1,990,016	+		IAI47_09425	0.24	-0.2
1,990,017	-		IAI47_09425	0.24	-0.9
1,990,017	-		IAI47_09425	0.24	+1.3
1,990,017	-		IAI47_09425	0.24	+1.1
1,990,017	-		IAI47_09425	0.24	-2.0
1,990,121	-		IAI47_09425	0.31	-0.3
1,990,180	+		IAI47_09425	0.35	+1.6
1,990,181	-		IAI47_09425	0.36	+0.1
1,990,202	+		IAI47_09425	0.37	-1.0
1,990,202	+		IAI47_09425	0.37	-2.3
1,990,203	-		IAI47_09425	0.37	+1.1
1,990,231	+		IAI47_09425	0.39	-0.0
1,990,268	-		IAI47_09425	0.42	+1.5
1,990,318	+		IAI47_09425	0.45	-1.1
1,990,319	-		IAI47_09425	0.45	+0.0
1,990,319	-		IAI47_09425	0.45	+0.2
1,990,322	+		IAI47_09425	0.45	-0.0
1,990,322	+		IAI47_09425	0.45	-0.1
1,990,322	+		IAI47_09425	0.45	-0.2
1,990,322	+		IAI47_09425	0.45	+2.1
1,990,322	+		IAI47_09425	0.45	-1.5
1,990,322	+		IAI47_09425	0.45	+0.6
1,990,322	+		IAI47_09425	0.45	-0.1
1,990,322	+		IAI47_09425	0.45	-0.6
1,990,322	+		IAI47_09425	0.45	-1.1
1,990,323	-		IAI47_09425	0.46	-0.3
1,990,323	-		IAI47_09425	0.46	+0.2
1,990,323	-		IAI47_09425	0.46	-0.6
1,990,323	-		IAI47_09425	0.46	+2.0
1,990,323	-		IAI47_09425	0.46	+0.4
1,990,323	-		IAI47_09425	0.46	+1.2
1,990,324	+		IAI47_09425	0.46	-1.0
1,990,324	+		IAI47_09425	0.46	+0.4
1,990,324	+		IAI47_09425	0.46	+0.6
1,990,324	+		IAI47_09425	0.46	-1.9
1,990,324	+		IAI47_09425	0.46	+0.5
1,990,324	+		IAI47_09425	0.46	-1.2
1,990,324	+		IAI47_09425	0.46	+1.0
1,990,324	+		IAI47_09425	0.46	+0.1
1,990,325	-		IAI47_09425	0.46	-1.4
1,990,325	-		IAI47_09425	0.46	-1.6
1,990,325	-		IAI47_09425	0.46	+0.1
1,990,325	-		IAI47_09425	0.46	-0.2
1,990,325	-		IAI47_09425	0.46	-1.9
1,990,325	-		IAI47_09425	0.46	-0.3
1,990,325	-		IAI47_09425	0.46	-0.3
1,990,334	-		IAI47_09425	0.46	-0.1
1,990,334	-		IAI47_09425	0.46	-1.3
1,990,334	-		IAI47_09425	0.46	+0.0
1,990,338	+		IAI47_09425	0.47	-2.6
1,990,377	+		IAI47_09425	0.49	-0.3
1,990,377	+		IAI47_09425	0.49	-0.9
1,990,377	+		IAI47_09425	0.49	+0.5
1,990,402	+		IAI47_09425	0.51	+0.1
1,990,402	+		IAI47_09425	0.51	-1.6
1,990,402	+		IAI47_09425	0.51	+1.0
1,990,402	+		IAI47_09425	0.51	-0.5
1,990,402	+		IAI47_09425	0.51	-0.8
1,990,402	+		IAI47_09425	0.51	-1.2
1,990,402	+		IAI47_09425	0.51	+1.0
1,990,402	+		IAI47_09425	0.51	+1.5
1,990,402	+		IAI47_09425	0.51	-2.0
1,990,402	+		IAI47_09425	0.51	+0.3
1,990,403	-		IAI47_09425	0.51	-0.8
1,990,403	-		IAI47_09425	0.51	+0.7
1,990,403	-		IAI47_09425	0.51	+1.3
1,990,403	-		IAI47_09425	0.51	+0.2
1,990,403	-		IAI47_09425	0.51	-0.9
1,990,403	-		IAI47_09425	0.51	+2.2
1,990,403	-		IAI47_09425	0.51	-0.4
1,990,410	+		IAI47_09425	0.52	-0.0
1,990,411	-		IAI47_09425	0.52	-1.3
1,990,411	-		IAI47_09425	0.52	-0.8
1,990,427	+		IAI47_09425	0.53	-0.7
1,990,428	-		IAI47_09425	0.53	-0.2
1,990,456	+		IAI47_09425	0.55	-0.5
1,990,457	-		IAI47_09425	0.55	-0.3
1,990,546	+		IAI47_09425	0.61	-0.3
1,990,569	+		IAI47_09425	0.63	-1.7
1,990,606	+		IAI47_09425	0.65	-0.9
1,990,631	-		IAI47_09425	0.67	-1.7