Strain Fitness in Pantoea sp. MT58 around IAI47_07590

Experiment: Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
1,605,409	+		IAI47_07585	0.43	-0.1
1,605,410	-		IAI47_07585	0.43	-0.2
1,605,410	-		IAI47_07585	0.43	-1.4
1,605,535	+		IAI47_07585	0.51	-1.5
1,605,536	-		IAI47_07585	0.51	+0.5
1,605,536	-		IAI47_07585	0.51	+1.2
1,605,536	-		IAI47_07585	0.51	-0.2
1,605,582	+		IAI47_07585	0.54	-0.0
1,605,582	+		IAI47_07585	0.54	+0.1
1,605,679	+		IAI47_07585	0.61	+1.6
1,605,679	+		IAI47_07585	0.61	-0.1
1,605,679	+		IAI47_07585	0.61	-0.2
1,605,680	-		IAI47_07585	0.61	-0.1
1,605,680	-		IAI47_07585	0.61	+1.4
1,605,684	+		IAI47_07585	0.61	+0.8
1,605,684	+		IAI47_07585	0.61	+0.5
1,605,684	+		IAI47_07585	0.61	+1.6
1,605,694	+		IAI47_07585	0.62	+0.2
1,605,694	+		IAI47_07585	0.62	+1.3
1,605,743	-		IAI47_07585	0.65	+1.3
1,605,776	+		IAI47_07585	0.68	-0.2
1,605,981	+		IAI47_07585	0.81	+0.7
1,605,981	+		IAI47_07585	0.81	+0.7
1,605,981	+		IAI47_07585	0.81	-2.0
1,605,982	-		IAI47_07585	0.82	-0.8
1,605,982	-		IAI47_07585	0.82	+0.2
1,606,034	+		IAI47_07585	0.85	+0.3
1,606,034	+		IAI47_07585	0.85	+1.0
1,606,034	+		IAI47_07585	0.85	+1.0
1,606,034	+		IAI47_07585	0.85	+0.2
1,606,034	+		IAI47_07585	0.85	+1.1
1,606,035	-		IAI47_07585	0.85	+1.1
1,606,035	-		IAI47_07585	0.85	-1.2
1,606,035	-		IAI47_07585	0.85	+0.7
1,606,035	-		IAI47_07585	0.85	-1.6
1,606,035	-		IAI47_07585	0.85	-0.2
1,606,035	-		IAI47_07585	0.85	+0.5
1,606,035	-		IAI47_07585	0.85	+2.7
1,606,098	+		IAI47_07585	0.89	+1.3
1,606,098	+		IAI47_07585	0.89	+0.4
1,606,099	-		IAI47_07585	0.90	+0.9
1,606,151	-				+0.3
1,606,186	+				-0.5
1,606,187	-				+1.3
1,606,187	-				+1.0
1,606,236	+				-1.1
1,606,236	+				+1.3
1,606,250	+				+1.0
1,606,278	+				+0.1
1,606,278	+				+0.5
1,606,278	+				-1.5
1,606,278	+				+0.8
1,606,278	+				+1.3
1,606,278	+				-0.5
1,606,279	-				-0.6
1,606,279	-				+0.2
1,606,279	-				+0.4
1,606,279	-				-1.5
1,606,279	-				+0.7
1,606,279	-				+0.1
1,606,279	-				+0.3
1,606,279	-				-0.8
1,606,279	-				-0.2
1,606,279	-				-0.8
1,606,279	-				-0.2
1,606,292	+				+0.3
1,606,292	+				+0.6
1,606,293	-				+0.1
1,606,343	+				+2.0
1,606,406	+		IAI47_07590	0.19	+1.3
1,606,406	+		IAI47_07590	0.19	+0.4
1,606,406	+		IAI47_07590	0.19	-1.7
1,606,407	-		IAI47_07590	0.19	-0.4
1,606,407	-		IAI47_07590	0.19	+1.3
1,606,410	-		IAI47_07590	0.19	+2.6
1,606,461	+		IAI47_07590	0.27	-1.4
1,606,461	+		IAI47_07590	0.27	-0.8
1,606,461	+		IAI47_07590	0.27	-1.5
1,606,462	-		IAI47_07590	0.27	-0.7
1,606,464	+		IAI47_07590	0.27	-1.0
1,606,464	+		IAI47_07590	0.27	-1.4
1,606,464	+		IAI47_07590	0.27	-0.1
1,606,464	+		IAI47_07590	0.27	-0.3
1,606,464	+		IAI47_07590	0.27	-2.2
1,606,464	+		IAI47_07590	0.27	-0.5
1,606,465	-		IAI47_07590	0.28	-0.3
1,606,465	-		IAI47_07590	0.28	-0.1
1,606,541	+		IAI47_07590	0.39	-0.1
1,606,541	+		IAI47_07590	0.39	-2.0
1,606,541	+		IAI47_07590	0.39	-0.3
1,606,542	-		IAI47_07590	0.39	+0.7
1,606,545	+		IAI47_07590	0.39	+0.7
1,606,545	+		IAI47_07590	0.39	-0.2
1,606,546	-		IAI47_07590	0.40	+0.7
1,606,546	-		IAI47_07590	0.40	+1.8
1,606,689	+		IAI47_07590	0.61	-2.1
1,606,689	+		IAI47_07590	0.61	+3.5
1,606,689	+		IAI47_07590	0.61	-0.0
1,606,689	+		IAI47_07590	0.61	-0.2
1,606,722	+		IAI47_07590	0.66	+1.6
1,606,722	+		IAI47_07590	0.66	+0.6
1,606,722	+		IAI47_07590	0.66	+1.3
1,606,722	+		IAI47_07590	0.66	-0.6
1,606,722	+		IAI47_07590	0.66	-0.4
1,606,723	-		IAI47_07590	0.66	-1.3
1,606,723	-		IAI47_07590	0.66	-0.6
1,606,723	-		IAI47_07590	0.66	-0.2
1,606,723	-		IAI47_07590	0.66	+1.6
1,606,724	+		IAI47_07590	0.66	-0.7
1,606,724	+		IAI47_07590	0.66	+0.5
1,606,725	-		IAI47_07590	0.66	-0.8
1,606,725	-		IAI47_07590	0.66	-0.7
1,606,725	-		IAI47_07590	0.66	-0.4
1,606,725	-		IAI47_07590	0.66	+1.3
1,606,749	+		IAI47_07590	0.70	+0.0
1,606,749	+		IAI47_07590	0.70	-0.8
1,606,749	+		IAI47_07590	0.70	-0.1
1,606,749	+		IAI47_07590	0.70	-0.4
1,606,750	-		IAI47_07590	0.70	-1.7
1,606,750	-		IAI47_07590	0.70	+0.0
1,606,760	+		IAI47_07590	0.72	+0.2
1,606,761	-		IAI47_07590	0.72	+1.7
1,606,812	+		IAI47_07590	0.79	-0.1
1,606,890	+				-0.1
1,606,891	-				-0.3
1,606,893	+				+1.5
1,606,893	+				+1.8
1,606,893	+				+0.3
1,606,893	+				+0.2
1,606,894	-				-0.5
1,606,899	+				+1.4
1,606,899	+				-1.2
1,606,900	-				+0.3
1,606,900	-				-1.4
1,606,917	-				+1.7
1,607,183	+		IAI47_07595	0.17	-0.8
1,607,242	+		IAI47_07595	0.22	+0.2
1,607,243	-		IAI47_07595	0.22	-0.7
1,607,243	-		IAI47_07595	0.22	+3.1
1,607,269	+		IAI47_07595	0.24	-0.0
1,607,269	+		IAI47_07595	0.24	+0.2
1,607,269	+		IAI47_07595	0.24	-0.2
1,607,269	+		IAI47_07595	0.24	-0.8
1,607,269	+		IAI47_07595	0.24	+0.2
1,607,269	+		IAI47_07595	0.24	+0.3
1,607,269	+		IAI47_07595	0.24	+0.3
1,607,270	-		IAI47_07595	0.24	-0.1
1,607,270	-		IAI47_07595	0.24	+0.5
1,607,270	-		IAI47_07595	0.24	+1.6
1,607,270	-		IAI47_07595	0.24	-0.0
1,607,270	-		IAI47_07595	0.24	-0.1
1,607,270	-		IAI47_07595	0.24	-0.9
1,607,331	+		IAI47_07595	0.29	-0.7
1,607,331	+		IAI47_07595	0.29	+2.1
1,607,332	-		IAI47_07595	0.29	-0.2
1,607,332	-		IAI47_07595	0.29	+0.2
1,607,332	-		IAI47_07595	0.29	+0.9
1,607,332	-		IAI47_07595	0.29	-0.3
1,607,377	+		IAI47_07595	0.33	+0.9
1,607,378	-		IAI47_07595	0.33	+0.8
1,607,378	-		IAI47_07595	0.33	+0.2
1,607,413	+		IAI47_07595	0.35	+2.6
1,607,508	+		IAI47_07595	0.43	-0.3
1,607,508	+		IAI47_07595	0.43	+0.8
1,607,508	+		IAI47_07595	0.43	+0.2
1,607,509	-		IAI47_07595	0.43	+0.2
1,607,509	-		IAI47_07595	0.43	-0.5
1,607,585	+		IAI47_07595	0.49	+0.1
1,607,602	+		IAI47_07595	0.50	-0.4
1,607,603	-		IAI47_07595	0.50	+0.9
1,607,603	-		IAI47_07595	0.50	-0.2
1,607,615	+		IAI47_07595	0.51	+1.4
1,607,616	-		IAI47_07595	0.51	+0.7
1,607,727	+		IAI47_07595	0.60	+0.9
1,607,727	+		IAI47_07595	0.60	+0.8
1,607,727	+		IAI47_07595	0.60	-0.7
1,607,727	+		IAI47_07595	0.60	+2.4
1,607,727	+		IAI47_07595	0.60	-0.0
1,607,727	+		IAI47_07595	0.60	+1.6
1,607,728	-		IAI47_07595	0.60	+2.6
1,607,791	+		IAI47_07595	0.65	+0.5
1,607,792	-		IAI47_07595	0.65	+0.2
1,607,792	-		IAI47_07595	0.65	-0.7
1,607,792	-		IAI47_07595	0.65	-0.2
1,607,792	-		IAI47_07595	0.65	-0.8
1,607,792	-		IAI47_07595	0.65	+0.1
1,607,792	-		IAI47_07595	0.65	+1.7
1,607,792	-		IAI47_07595	0.65	+0.9
1,607,792	-		IAI47_07595	0.65	+1.1
1,607,792	-		IAI47_07595	0.65	+1.2
1,607,818	+		IAI47_07595	0.67	-0.2
1,607,818	+		IAI47_07595	0.67	-1.2
1,607,819	-		IAI47_07595	0.67	+1.6
1,607,819	-		IAI47_07595	0.67	-0.8