Strain Fitness in Pantoea sp. MT58 around IAI47_05510

Experiment: Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
1,160,933	+				+1.1
1,160,933	+				+0.4
1,160,933	+				+2.6
1,160,934	-				-0.7
1,160,934	-				-0.4
1,160,972	+				-0.4
1,160,972	+				-0.2
1,160,973	-				+0.5
1,161,009	+		IAI47_05510	0.11	+0.1
1,161,009	+		IAI47_05510	0.11	-1.9
1,161,022	+		IAI47_05510	0.14	-1.4
1,161,022	+		IAI47_05510	0.14	-0.8
1,161,023	-		IAI47_05510	0.15	-1.9
1,161,028	+		IAI47_05510	0.16	-0.2
1,161,029	-		IAI47_05510	0.16	-0.7
1,161,079	+		IAI47_05510	0.31	-1.0
1,161,079	+		IAI47_05510	0.31	-0.4
1,161,085	+		IAI47_05510	0.32	-0.8
1,161,094	+		IAI47_05510	0.35	-1.4
1,161,106	+		IAI47_05510	0.38	-0.8
1,161,107	-		IAI47_05510	0.38	-1.7
1,161,116	+		IAI47_05510	0.41	-1.0
1,161,116	+		IAI47_05510	0.41	-0.0
1,161,116	+		IAI47_05510	0.41	+1.6
1,161,116	+		IAI47_05510	0.41	-1.1
1,161,117	-		IAI47_05510	0.41	-1.4
1,161,117	-		IAI47_05510	0.41	-1.4
1,161,117	-		IAI47_05510	0.41	+0.6
1,161,117	-		IAI47_05510	0.41	-0.7
1,161,136	-		IAI47_05510	0.47	-0.5
1,161,136	-		IAI47_05510	0.47	-1.4
1,161,136	-		IAI47_05510	0.47	-0.7
1,161,156	+		IAI47_05510	0.52	-1.2
1,161,156	+		IAI47_05510	0.52	+0.1
1,161,157	-		IAI47_05510	0.53	+1.1
1,161,180	+		IAI47_05510	0.59	-1.6
1,161,180	+		IAI47_05510	0.59	-2.1
1,161,180	+		IAI47_05510	0.59	+1.6
1,161,181	-		IAI47_05510	0.59	-0.4
1,161,186	+		IAI47_05510	0.61	-1.5
1,161,186	+		IAI47_05510	0.61	+0.3
1,161,186	+		IAI47_05510	0.61	-1.1
1,161,186	+		IAI47_05510	0.61	-2.1
1,161,186	+		IAI47_05510	0.61	-0.8
1,161,186	+		IAI47_05510	0.61	+0.3
1,161,186	+		IAI47_05510	0.61	+0.4
1,161,186	+		IAI47_05510	0.61	-1.3
1,161,187	-		IAI47_05510	0.61	-3.0
1,161,187	-		IAI47_05510	0.61	-2.1
1,161,187	-		IAI47_05510	0.61	-0.4
1,161,187	-		IAI47_05510	0.61	-1.2
1,161,187	-		IAI47_05510	0.61	-0.2
1,161,187	-		IAI47_05510	0.61	-0.5
1,161,187	-		IAI47_05510	0.61	-0.3
1,161,187	-		IAI47_05510	0.61	+0.2
1,161,187	-		IAI47_05510	0.61	-0.4
1,161,187	-		IAI47_05510	0.61	+0.1
1,161,187	-		IAI47_05510	0.61	+0.3
1,161,255	+		IAI47_05510	0.80	+0.4
1,161,255	+		IAI47_05510	0.80	-0.6
1,161,255	+		IAI47_05510	0.80	+1.1
1,161,256	-		IAI47_05510	0.81	-2.9
1,161,256	-		IAI47_05510	0.81	-1.6
1,161,256	-		IAI47_05510	0.81	-2.1
1,161,276	-		IAI47_05510	0.86	-1.4
1,161,306	+				-1.2
1,161,339	+				-0.4
1,161,339	+				-0.7
1,161,339	+				-1.0
1,161,340	-				+0.2
1,161,340	-				+0.0
1,161,340	-				+1.9
1,161,343	+				-1.4
1,161,343	+				-0.7
1,161,343	+				-1.9
1,161,343	+				-1.4
1,161,343	+				+0.6
1,161,344	-				-0.7
1,161,344	-				-0.9
1,161,344	-				-1.2
1,161,344	-				-0.5
1,161,348	+				-0.2
1,161,348	+				+2.0
1,161,354	+				-0.2
1,161,354	+				-0.6
1,161,354	+				-1.4
1,161,354	+				-0.4
1,161,354	+				+0.3
1,161,354	+				+0.4
1,161,355	-				+0.2
1,161,355	-				-2.4
1,161,355	-				+0.8
1,161,355	-				+0.4
1,161,358	+				-0.4
1,161,358	+				-1.1
1,161,358	+				+0.1
1,161,358	+				-1.2
1,161,358	+				-1.4
1,161,358	+				-1.5
1,161,358	+				-1.6
1,161,358	+				+0.4
1,161,358	+				-0.6
1,161,358	+				-1.3
1,161,358	+				-1.7
1,161,358	+				-1.7
1,161,359	-				-0.7
1,161,359	-				-0.7
1,161,359	-				-1.7
1,161,359	-				-1.4
1,161,359	-				+0.3
1,161,359	-				+0.2
1,161,359	-				+0.0
1,161,359	-				-1.9
1,161,359	-				-1.3
1,161,359	-				+0.3
1,161,359	-				-0.3
1,161,359	-				-1.3
1,161,359	-				-0.3
1,161,361	+				-0.2
1,161,361	+				-0.7
1,161,361	+				+0.9
1,161,361	+				-1.8
1,161,361	+				-0.6
1,161,361	+				-0.9
1,161,362	-				-0.9
1,161,362	-				-0.2
1,161,362	-				+1.0
1,161,362	-				-1.9
1,161,362	-				-0.5
1,161,362	-				-0.6
1,161,362	-				-2.1
1,161,362	-				-0.5
1,161,386	+				-0.3
1,161,386	+				+0.7
1,161,386	+				+0.8
1,161,387	-				-0.2
1,161,387	-				+0.9
1,161,387	-				+2.5
1,161,387	-				-0.2
1,161,391	+				-0.4
1,161,391	+				-0.6
1,161,391	+				+0.6
1,161,391	+				-1.4
1,161,391	+				+0.6
1,161,392	-				-0.8
1,161,392	-				-0.9
1,161,392	-				-2.0
1,161,437	+				-2.0
1,161,438	-				-0.1
1,161,438	-				-0.2
1,161,438	-				+0.4
1,161,447	+				-1.1
1,161,448	-				-2.2
1,161,448	-				+1.4
1,161,486	-				+1.1
1,161,486	-				+0.6
1,161,514	+				+2.3
1,161,515	-		IAI47_05515	0.10	-0.5
1,161,554	+		IAI47_05515	0.15	+1.1
1,161,554	+		IAI47_05515	0.15	+0.7
1,161,554	+		IAI47_05515	0.15	-1.8
1,161,555	-		IAI47_05515	0.15	-0.3
1,161,585	+		IAI47_05515	0.19	-0.5
1,161,598	-		IAI47_05515	0.21	+0.4
1,161,598	-		IAI47_05515	0.21	-1.8
1,161,600	+		IAI47_05515	0.21	+1.6
1,161,600	+		IAI47_05515	0.21	-1.4
1,161,600	+		IAI47_05515	0.21	+1.4
1,161,600	+		IAI47_05515	0.21	-0.2
1,161,600	+		IAI47_05515	0.21	-1.6
1,161,601	-		IAI47_05515	0.21	-0.7
1,161,601	-		IAI47_05515	0.21	-0.8
1,161,601	-		IAI47_05515	0.21	-0.4
1,161,601	-		IAI47_05515	0.21	+1.8
1,161,601	-		IAI47_05515	0.21	-1.9
1,161,601	-		IAI47_05515	0.21	-0.8
1,161,601	-		IAI47_05515	0.21	-0.3
1,161,601	-		IAI47_05515	0.21	+0.7
1,161,609	+		IAI47_05515	0.22	-1.1
1,161,684	+		IAI47_05515	0.31	-0.7
1,161,684	+		IAI47_05515	0.31	-0.7
1,161,684	+		IAI47_05515	0.31	-1.6
1,161,684	+		IAI47_05515	0.31	+2.6
1,161,684	+		IAI47_05515	0.31	-0.8
1,161,684	+		IAI47_05515	0.31	-1.1
1,161,685	-		IAI47_05515	0.32	+1.0
1,161,685	-		IAI47_05515	0.32	+0.1
1,161,685	-		IAI47_05515	0.32	-1.8
1,161,690	+		IAI47_05515	0.32	-1.4
1,161,691	-		IAI47_05515	0.32	+1.5
1,161,732	+		IAI47_05515	0.38	-1.9
1,161,733	-		IAI47_05515	0.38	+0.0
1,161,733	-		IAI47_05515	0.38	-1.9
1,161,733	-		IAI47_05515	0.38	+0.2
1,161,750	+		IAI47_05515	0.40	-1.7
1,161,751	-		IAI47_05515	0.40	+0.5
1,161,812	+		IAI47_05515	0.48	+1.2
1,161,812	+		IAI47_05515	0.48	-1.1
1,161,813	-		IAI47_05515	0.48	+0.6
1,161,813	-		IAI47_05515	0.48	+0.6
1,161,837	+		IAI47_05515	0.51	-0.8
1,161,837	+		IAI47_05515	0.51	+0.1
1,161,838	-		IAI47_05515	0.51	+0.7
1,161,838	-		IAI47_05515	0.51	-0.1
1,161,838	-		IAI47_05515	0.51	-0.1
1,161,838	-		IAI47_05515	0.51	+0.5
1,161,911	-		IAI47_05515	0.60	+1.2
1,161,918	+		IAI47_05515	0.61	-2.2
1,161,918	+		IAI47_05515	0.61	-1.7
1,161,918	+		IAI47_05515	0.61	+0.4
1,161,918	+		IAI47_05515	0.61	-1.0
1,161,918	+		IAI47_05515	0.61	+0.9
1,161,919	-		IAI47_05515	0.61	-1.8
1,161,919	-		IAI47_05515	0.61	+0.6
1,161,963	+		IAI47_05515	0.67	-1.1
1,161,963	+		IAI47_05515	0.67	-1.3
1,161,963	+		IAI47_05515	0.67	+0.7
1,161,964	-		IAI47_05515	0.67	-0.2
1,161,964	-		IAI47_05515	0.67	-0.5
1,162,002	+		IAI47_05515	0.72	-1.0
1,162,002	+		IAI47_05515	0.72	+0.1
1,162,002	+		IAI47_05515	0.72	-0.6
1,162,002	+		IAI47_05515	0.72	-1.2
1,162,002	+		IAI47_05515	0.72	-2.0
1,162,002	+		IAI47_05515	0.72	-0.5
1,162,002	+		IAI47_05515	0.72	-0.5
1,162,002	+		IAI47_05515	0.72	+1.4
1,162,002	+		IAI47_05515	0.72	+0.6
1,162,002	+		IAI47_05515	0.72	-2.1
1,162,002	+		IAI47_05515	0.72	-1.4
1,162,003	-		IAI47_05515	0.72	+1.0
1,162,003	-		IAI47_05515	0.72	-0.5
1,162,003	-		IAI47_05515	0.72	+0.1
1,162,003	-		IAI47_05515	0.72	-0.2
1,162,003	-		IAI47_05515	0.72	-0.7
1,162,008	+		IAI47_05515	0.72	+1.2
1,162,008	+		IAI47_05515	0.72	-0.7
1,162,008	+		IAI47_05515	0.72	+0.1
1,162,009	-		IAI47_05515	0.73	+0.5
1,162,009	-		IAI47_05515	0.73	+0.6
1,162,009	-		IAI47_05515	0.73	-0.8
1,162,009	-		IAI47_05515	0.73	-0.8
1,162,009	-		IAI47_05515	0.73	-1.2
1,162,012	+		IAI47_05515	0.73	+0.1
1,162,012	+		IAI47_05515	0.73	+0.3
1,162,012	+		IAI47_05515	0.73	-1.1
1,162,012	+		IAI47_05515	0.73	-0.1
1,162,012	+		IAI47_05515	0.73	-2.2
1,162,012	+		IAI47_05515	0.73	+0.1
1,162,013	-		IAI47_05515	0.73	-0.1
1,162,013	-		IAI47_05515	0.73	-1.2
1,162,013	-		IAI47_05515	0.73	+0.4
1,162,013	-		IAI47_05515	0.73	-0.6
1,162,013	-		IAI47_05515	0.73	-1.7
1,162,013	-		IAI47_05515	0.73	+2.1
1,162,013	-		IAI47_05515	0.73	+2.6
1,162,033	+		IAI47_05515	0.76	+0.1
1,162,033	+		IAI47_05515	0.76	+0.7
1,162,034	-		IAI47_05515	0.76	+1.0
1,162,034	-		IAI47_05515	0.76	-2.5
1,162,074	+		IAI47_05515	0.81	+2.6
1,162,074	+		IAI47_05515	0.81	-0.3
1,162,074	+		IAI47_05515	0.81	+0.8
1,162,075	-		IAI47_05515	0.81	-0.2
1,162,090	+		IAI47_05515	0.83	+0.3
1,162,091	-		IAI47_05515	0.83	+0.1
1,162,110	+		IAI47_05515	0.85	-0.5
1,162,111	-		IAI47_05515	0.86	-0.3
1,162,125	+		IAI47_05515	0.87	+0.3
1,162,126	-		IAI47_05515	0.87	+1.0
1,162,126	-		IAI47_05515	0.87	-1.1
1,162,168	-				+0.1
1,162,206	+				+0.2
1,162,207	-				-1.0
1,162,207	-				-1.2
1,162,212	+				+0.3
1,162,212	+				+0.2
1,162,212	+				+0.1
1,162,212	+				-1.9
1,162,212	+				-0.2
1,162,212	+				+4.0
1,162,212	+				-1.9
1,162,212	+				+1.4
1,162,212	+				+0.6
1,162,213	-				-2.0
1,162,213	-				-0.1
1,162,213	-				-0.2
1,162,213	-				+0.3
1,162,213	-				+2.0
1,162,224	+				+2.2
1,162,224	+				-0.4
1,162,224	+				+0.4
1,162,224	+				+1.2
1,162,224	+				+0.1
1,162,224	+				-0.4
1,162,224	+				+1.6
1,162,224	+				+0.2
1,162,224	+				-1.4
1,162,224	+				-1.9
1,162,224	+				+2.6
1,162,224	+				-1.5
1,162,224	+				-0.4
1,162,225	-				-1.2
1,162,225	-				+3.2
1,162,225	-				+0.6
1,162,225	-				+1.5
1,162,225	-				-1.1
1,162,225	-				-2.7
1,162,225	-				+0.4
1,162,225	-				-0.2
1,162,225	-				+0.3
1,162,225	-				-0.2
1,162,225	-				+1.6
1,162,225	-				-1.1
1,162,225	-				+0.3
1,162,225	-				+2.1
1,162,225	-				+0.2
1,162,225	-				+1.8
1,162,227	+				+0.7
1,162,227	+				+1.1
1,162,227	+				-2.5
1,162,227	+				+0.2
1,162,227	+				-1.1
1,162,228	-				+0.7
1,162,228	-				-2.1
1,162,228	-				-0.1
1,162,228	-				+0.9
1,162,228	-				-0.3
1,162,228	-				-1.6
1,162,228	-				-0.2
1,162,228	-				+0.3
1,162,235	+				+0.1
1,162,250	+				-1.1
1,162,250	+				+1.6
1,162,250	+				-0.7
1,162,251	-				+0.1
1,162,310	+				-0.6