Strain Fitness in Pantoea sp. MT58 around IAI47_00660

Experiment: Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
141,240	+		IAI47_00655	0.26	-3.8
141,273	-		IAI47_00655	0.28	-3.5
141,280	+		IAI47_00655	0.29	-3.3
141,325	-		IAI47_00655	0.33	-4.8
141,325	-		IAI47_00655	0.33	-3.3
141,464	-		IAI47_00655	0.45	-4.8
141,695	+		IAI47_00655	0.66	-3.7
141,703	-		IAI47_00655	0.66	-2.9
142,073	-				-0.6
142,090	-				-0.9
142,138	-				-0.7
142,138	-				-0.4
142,138	-				-0.8
142,138	-				-1.1
142,162	+				-2.2
142,162	+				+0.5
142,163	-				-0.5
142,204	+		IAI47_00660	0.12	-3.1
142,205	-		IAI47_00660	0.12	-2.5
142,205	-		IAI47_00660	0.12	+0.2
142,267	+		IAI47_00660	0.18	-1.5
142,267	+		IAI47_00660	0.18	-2.8
142,267	+		IAI47_00660	0.18	-1.4
142,267	+		IAI47_00660	0.18	-2.4
142,268	-		IAI47_00660	0.18	-0.3
142,268	-		IAI47_00660	0.18	-0.4
142,322	-		IAI47_00660	0.23	-0.0
142,322	-		IAI47_00660	0.23	-1.5
142,418	-		IAI47_00660	0.32	+1.9
142,418	-		IAI47_00660	0.32	-0.5
142,445	-		IAI47_00660	0.34	+2.1
142,459	+		IAI47_00660	0.36	-1.8
142,459	+		IAI47_00660	0.36	-2.8
142,459	+		IAI47_00660	0.36	-2.7
142,459	+		IAI47_00660	0.36	-1.1
142,460	-		IAI47_00660	0.36	+0.6
142,460	-		IAI47_00660	0.36	-0.4
142,460	-		IAI47_00660	0.36	-0.7
142,531	+		IAI47_00660	0.42	-3.0
142,532	-		IAI47_00660	0.42	+0.8
142,532	-		IAI47_00660	0.42	+0.5
142,532	-		IAI47_00660	0.42	-0.1
142,532	-		IAI47_00660	0.42	+0.5
142,532	-		IAI47_00660	0.42	+0.0
142,532	-		IAI47_00660	0.42	+0.1
142,532	-		IAI47_00660	0.42	-0.4
142,564	+		IAI47_00660	0.45	-2.8
142,565	-		IAI47_00660	0.45	+0.1
142,565	-		IAI47_00660	0.45	+2.3
142,565	-		IAI47_00660	0.45	-1.2
142,565	-		IAI47_00660	0.45	-1.5
142,565	-		IAI47_00660	0.45	-0.8
142,565	-		IAI47_00660	0.45	+0.7
142,565	-		IAI47_00660	0.45	-0.1
142,565	-		IAI47_00660	0.45	+0.5
142,566	+		IAI47_00660	0.45	-2.2
142,566	+		IAI47_00660	0.45	-1.6
142,567	-		IAI47_00660	0.46	+0.4
142,567	-		IAI47_00660	0.46	+0.1
142,567	-		IAI47_00660	0.46	+2.1
142,567	-		IAI47_00660	0.46	-0.8
142,567	-		IAI47_00660	0.46	-0.5
142,567	-		IAI47_00660	0.46	-0.6
142,567	-		IAI47_00660	0.46	-1.3
142,567	-		IAI47_00660	0.46	-0.8
142,567	-		IAI47_00660	0.46	-1.2
142,567	-		IAI47_00660	0.46	-2.8
142,567	-		IAI47_00660	0.46	-1.0
142,567	-		IAI47_00660	0.46	+0.3
142,567	-		IAI47_00660	0.46	+0.3
142,567	-		IAI47_00660	0.46	-0.9
142,629	+		IAI47_00660	0.51	-2.1
142,629	+		IAI47_00660	0.51	-3.1
142,629	+		IAI47_00660	0.51	-2.9
142,630	-		IAI47_00660	0.51	-0.7
142,630	-		IAI47_00660	0.51	-1.3
142,652	-		IAI47_00660	0.53	-0.9
142,661	-		IAI47_00660	0.54	-0.4
142,661	-		IAI47_00660	0.54	+0.6
142,687	+		IAI47_00660	0.57	-2.5
142,687	+		IAI47_00660	0.57	-3.7
142,687	+		IAI47_00660	0.57	-2.5
142,687	+		IAI47_00660	0.57	-0.9
142,687	+		IAI47_00660	0.57	-3.0
142,687	+		IAI47_00660	0.57	-3.0
142,688	-		IAI47_00660	0.57	+2.4
142,688	-		IAI47_00660	0.57	-1.1
142,688	-		IAI47_00660	0.57	-0.1
142,688	-		IAI47_00660	0.57	+0.0
142,688	-		IAI47_00660	0.57	-0.1
142,688	-		IAI47_00660	0.57	-1.0
142,688	-		IAI47_00660	0.57	-0.2
142,688	-		IAI47_00660	0.57	-0.6
142,688	-		IAI47_00660	0.57	-1.7
142,688	-		IAI47_00660	0.57	-0.9
142,688	-		IAI47_00660	0.57	-0.2
142,703	-		IAI47_00660	0.58	+0.2
142,703	-		IAI47_00660	0.58	-1.6
142,720	+		IAI47_00660	0.60	-2.7
142,721	-		IAI47_00660	0.60	-1.0
142,721	-		IAI47_00660	0.60	-2.0
142,721	-		IAI47_00660	0.60	-2.8
142,721	-		IAI47_00660	0.60	-1.1
142,721	-		IAI47_00660	0.60	+0.1
142,721	-		IAI47_00660	0.60	-1.6
142,721	-		IAI47_00660	0.60	+0.9
142,721	-		IAI47_00660	0.60	+1.1
142,721	-		IAI47_00660	0.60	+0.1
142,721	-		IAI47_00660	0.60	+0.2
142,721	-		IAI47_00660	0.60	-1.2
142,721	-		IAI47_00660	0.60	-2.0
142,721	-		IAI47_00660	0.60	+0.2
142,741	+		IAI47_00660	0.62	-2.0
142,742	-		IAI47_00660	0.62	-0.8
142,779	+		IAI47_00660	0.65	-2.2
142,854	-		IAI47_00660	0.72	-2.3
142,854	-		IAI47_00660	0.72	-0.9
142,866	+		IAI47_00660	0.73	-1.0
142,867	-		IAI47_00660	0.73	+0.2
142,867	-		IAI47_00660	0.73	-0.0
142,867	-		IAI47_00660	0.73	-0.7
142,867	-		IAI47_00660	0.73	-0.5
142,867	-		IAI47_00660	0.73	-0.4
142,893	-		IAI47_00660	0.76	-0.7
142,916	-		IAI47_00660	0.78	-0.3
143,005	+		IAI47_00660	0.86	-3.0
143,005	+		IAI47_00660	0.86	-0.2
143,006	-		IAI47_00660	0.86	-1.5
143,007	+		IAI47_00660	0.86	-1.3
143,007	+		IAI47_00660	0.86	-1.3
143,008	-		IAI47_00660	0.87	+0.0
143,101	+				-3.3
143,102	-				-0.8
143,108	+				-2.2
143,109	-				-1.9
143,109	-				-0.7
143,109	-				+0.3
143,111	+				-1.3
143,111	+				-1.7
143,111	+				+0.4
143,112	-				-0.9
143,112	-				+1.0
143,112	-				-0.8
143,112	-				-2.4
143,114	-				+0.2
143,114	-				-2.9
143,114	-				+0.5
143,152	+				-2.3
143,153	-				-0.1
143,153	-				-0.9
143,187	+				+0.9
143,188	-				-0.5
143,188	-				+0.4
143,227	+				-1.3
143,227	+				+1.6
143,228	-				+1.0
143,231	+				-2.5
143,231	+				-0.9
143,231	+				+0.5
143,231	+				+0.8
143,231	+				+0.7
143,231	+				+1.5
143,231	+				-0.1
143,232	-				-0.4
143,232	-				-0.8
143,235	-				+0.1
143,245	+				+0.2
143,246	-				-1.7
143,262	+				-0.9
143,262	+				+0.3
143,262	+				+2.1
143,275	+				+2.0
143,275	+				-0.4
143,276	-				-1.0
143,276	-				+0.6
143,276	-				+0.6
143,276	-				+2.2
143,285	+				+0.1
143,286	-				-0.5
143,286	-				-0.5
143,300	+				+0.4
143,300	+				+0.4
143,301	-				+0.1
143,301	-				+0.0
143,304	+				+0.5
143,304	+				-0.2
143,304	+				+2.5
143,304	+				+0.2
143,304	+				-0.1
143,304	+				+1.1
143,305	-				+0.2
143,305	-				-0.3
143,305	-				+0.3
143,305	-				+0.6
143,305	-				-0.3
143,305	-				-0.2
143,422	+		IAI47_00665	0.19	-1.3
143,422	+		IAI47_00665	0.19	+0.3
143,437	+		IAI47_00665	0.20	-0.2
143,437	+		IAI47_00665	0.20	+0.4
143,438	-		IAI47_00665	0.20	-0.9
143,438	-		IAI47_00665	0.20	-0.8
143,438	-		IAI47_00665	0.20	-1.4
143,468	+		IAI47_00665	0.23	+0.9
143,468	+		IAI47_00665	0.23	-0.0
143,469	-		IAI47_00665	0.23	-2.0
143,469	-		IAI47_00665	0.23	+1.2
143,469	-		IAI47_00665	0.23	+1.0
143,500	+		IAI47_00665	0.26	-1.0
143,500	+		IAI47_00665	0.26	-0.2
143,500	+		IAI47_00665	0.26	-0.1
143,501	-		IAI47_00665	0.26	+0.5
143,501	-		IAI47_00665	0.26	-1.2
143,501	-		IAI47_00665	0.26	+1.0
143,512	+		IAI47_00665	0.27	+5.4
143,513	-		IAI47_00665	0.27	+0.3
143,567	+		IAI47_00665	0.33	+1.2
143,567	+		IAI47_00665	0.33	-1.2
143,567	+		IAI47_00665	0.33	+1.3
143,567	+		IAI47_00665	0.33	+0.1
143,567	+		IAI47_00665	0.33	-1.0
143,567	+		IAI47_00665	0.33	-0.7
143,567	+		IAI47_00665	0.33	-1.3
143,567	+		IAI47_00665	0.33	+0.6
143,567	+		IAI47_00665	0.33	+1.1
143,567	+		IAI47_00665	0.33	+0.6
143,567	+		IAI47_00665	0.33	-0.5
143,567	+		IAI47_00665	0.33	-2.4
143,567	+		IAI47_00665	0.33	+0.5
143,567	+		IAI47_00665	0.33	+0.2
143,567	+		IAI47_00665	0.33	-1.7
143,567	+		IAI47_00665	0.33	-1.4
143,567	+		IAI47_00665	0.33	+0.4
143,567	+		IAI47_00665	0.33	-0.9
143,567	+		IAI47_00665	0.33	-0.3
143,568	-		IAI47_00665	0.33	+0.7
143,568	-		IAI47_00665	0.33	+1.6
143,568	-		IAI47_00665	0.33	+0.1
143,568	-		IAI47_00665	0.33	-1.5
143,568	-		IAI47_00665	0.33	+0.3
143,568	-		IAI47_00665	0.33	-1.7
143,568	-		IAI47_00665	0.33	+1.0
143,568	-		IAI47_00665	0.33	-1.0
143,568	-		IAI47_00665	0.33	+0.9
143,568	-		IAI47_00665	0.33	+0.5
143,568	-		IAI47_00665	0.33	-0.3
143,568	-		IAI47_00665	0.33	-0.2
143,568	-		IAI47_00665	0.33	-0.0
143,568	-		IAI47_00665	0.33	-0.0
143,568	-		IAI47_00665	0.33	+0.3
143,568	-		IAI47_00665	0.33	-0.6
143,568	-		IAI47_00665	0.33	-1.4
143,569	+		IAI47_00665	0.33	-0.1
143,569	+		IAI47_00665	0.33	-1.0
143,569	+		IAI47_00665	0.33	-1.0
143,569	+		IAI47_00665	0.33	+1.0
143,569	+		IAI47_00665	0.33	+2.1
143,569	+		IAI47_00665	0.33	-0.7
143,569	+		IAI47_00665	0.33	+0.9
143,569	+		IAI47_00665	0.33	+1.3
143,569	+		IAI47_00665	0.33	+1.0
143,569	+		IAI47_00665	0.33	+0.1
143,569	+		IAI47_00665	0.33	+1.0
143,569	+		IAI47_00665	0.33	-0.2
143,569	+		IAI47_00665	0.33	+0.9
143,569	+		IAI47_00665	0.33	-0.9
143,569	+		IAI47_00665	0.33	-1.0
143,569	+		IAI47_00665	0.33	+1.0
143,569	+		IAI47_00665	0.33	+0.4
143,569	+		IAI47_00665	0.33	+0.9
143,570	-		IAI47_00665	0.33	-0.8
143,570	-		IAI47_00665	0.33	-0.1
143,570	-		IAI47_00665	0.33	-0.6
143,570	-		IAI47_00665	0.33	-2.1
143,570	-		IAI47_00665	0.33	-1.3
143,570	-		IAI47_00665	0.33	+0.2
143,570	-		IAI47_00665	0.33	+0.2
143,570	-		IAI47_00665	0.33	+0.6
143,570	-		IAI47_00665	0.33	+2.5
143,570	-		IAI47_00665	0.33	-0.9
143,570	-		IAI47_00665	0.33	-1.3
143,570	-		IAI47_00665	0.33	+0.5
143,570	-		IAI47_00665	0.33	-0.0
143,572	+		IAI47_00665	0.33	-1.0
143,572	+		IAI47_00665	0.33	+0.4
143,573	-		IAI47_00665	0.33	-1.4
143,573	-		IAI47_00665	0.33	-3.1
143,573	-		IAI47_00665	0.33	-0.6
143,573	-		IAI47_00665	0.33	-0.2
143,573	-		IAI47_00665	0.33	+1.5
143,573	-		IAI47_00665	0.33	-1.5
143,578	+		IAI47_00665	0.34	+1.7
143,578	+		IAI47_00665	0.34	-0.1
143,578	+		IAI47_00665	0.34	-0.1
143,578	+		IAI47_00665	0.34	-0.3
143,579	-		IAI47_00665	0.34	-0.9
143,583	+		IAI47_00665	0.34	-0.1
143,583	+		IAI47_00665	0.34	+0.0
143,584	-		IAI47_00665	0.34	+0.3
143,584	-		IAI47_00665	0.34	-1.3
143,584	-		IAI47_00665	0.34	+1.0
143,584	-		IAI47_00665	0.34	+0.5
143,584	-		IAI47_00665	0.34	-0.0
143,594	+		IAI47_00665	0.35	+1.0
143,621	+		IAI47_00665	0.38	+0.1
143,621	+		IAI47_00665	0.38	-0.7
143,621	+		IAI47_00665	0.38	+0.7
143,621	+		IAI47_00665	0.38	+0.0
143,621	+		IAI47_00665	0.38	-0.4
143,621	+		IAI47_00665	0.38	-0.6
143,622	-		IAI47_00665	0.38	+0.1
143,622	-		IAI47_00665	0.38	-0.4
143,642	+		IAI47_00665	0.40	-1.2
143,642	+		IAI47_00665	0.40	-1.0
143,643	-		IAI47_00665	0.40	+0.2
143,704	+		IAI47_00665	0.46	-1.3
143,729	+		IAI47_00665	0.48	+0.4
143,729	+		IAI47_00665	0.48	+1.0
143,729	+		IAI47_00665	0.48	+0.7
143,729	+		IAI47_00665	0.48	+1.0
143,729	+		IAI47_00665	0.48	-0.0
143,729	+		IAI47_00665	0.48	+1.7
143,729	+		IAI47_00665	0.48	-0.1
143,729	+		IAI47_00665	0.48	-0.8
143,729	+		IAI47_00665	0.48	-0.6
143,729	+		IAI47_00665	0.48	+0.2
143,729	+		IAI47_00665	0.48	-0.7
143,729	+		IAI47_00665	0.48	+0.6
143,729	+		IAI47_00665	0.48	+0.7
143,729	+		IAI47_00665	0.48	+1.5
143,729	+		IAI47_00665	0.48	-1.0
143,729	+		IAI47_00665	0.48	+1.2
143,730	-		IAI47_00665	0.48	+0.2
143,730	-		IAI47_00665	0.48	+0.3
143,730	-		IAI47_00665	0.48	+0.1
143,730	-		IAI47_00665	0.48	-0.3
143,730	-		IAI47_00665	0.48	-0.7
143,730	-		IAI47_00665	0.48	+2.5
143,730	-		IAI47_00665	0.48	+0.9
143,730	-		IAI47_00665	0.48	-0.5
143,730	-		IAI47_00665	0.48	-1.0
143,730	-		IAI47_00665	0.48	+0.4
143,730	-		IAI47_00665	0.48	+2.3
143,730	-		IAI47_00665	0.48	-0.2
143,731	+		IAI47_00665	0.48	+0.6
143,731	+		IAI47_00665	0.48	-0.4
143,731	+		IAI47_00665	0.48	+1.4
143,732	-		IAI47_00665	0.48	-1.2
143,732	-		IAI47_00665	0.48	+1.0
143,732	-		IAI47_00665	0.48	+0.4
143,732	-		IAI47_00665	0.48	-1.5
143,732	-		IAI47_00665	0.48	+2.1
143,732	-		IAI47_00665	0.48	+0.0
143,732	-		IAI47_00665	0.48	+0.6
143,821	-		IAI47_00665	0.57	+0.5
143,831	+		IAI47_00665	0.58	+1.4
143,831	+		IAI47_00665	0.58	+0.1
143,831	+		IAI47_00665	0.58	+0.3
143,832	-		IAI47_00665	0.58	+0.3
143,908	+		IAI47_00665	0.65	+1.0
143,908	+		IAI47_00665	0.65	-0.2
143,908	+		IAI47_00665	0.65	-0.1
143,908	+		IAI47_00665	0.65	+0.1
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