Strain Fitness in Pantoea sp. MT58 around IAI47_07870

Experiment: Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
1,668,362	+		IAI47_07865	0.74	+2.1
1,668,362	+		IAI47_07865	0.74	-2.1
1,668,362	+		IAI47_07865	0.74	-0.5
1,668,362	+		IAI47_07865	0.74	+0.7
1,668,362	+		IAI47_07865	0.74	-0.3
1,668,362	+		IAI47_07865	0.74	+1.7
1,668,362	+		IAI47_07865	0.74	+0.1
1,668,363	-		IAI47_07865	0.74	+0.2
1,668,363	-		IAI47_07865	0.74	-0.4
1,668,363	-		IAI47_07865	0.74	+1.0
1,668,363	-		IAI47_07865	0.74	+0.7
1,668,363	-		IAI47_07865	0.74	+1.2
1,668,413	+		IAI47_07865	0.78	-1.9
1,668,413	+		IAI47_07865	0.78	+1.7
1,668,414	-		IAI47_07865	0.78	-0.8
1,668,447	+		IAI47_07865	0.80	-1.1
1,668,447	+		IAI47_07865	0.80	+1.8
1,668,447	+		IAI47_07865	0.80	-0.2
1,668,447	+		IAI47_07865	0.80	-1.1
1,668,447	+		IAI47_07865	0.80	-0.4
1,668,448	-		IAI47_07865	0.80	-0.0
1,668,448	-		IAI47_07865	0.80	+1.5
1,668,448	-		IAI47_07865	0.80	+0.8
1,668,448	-		IAI47_07865	0.80	-2.6
1,668,449	+		IAI47_07865	0.80	+0.1
1,668,449	+		IAI47_07865	0.80	-0.0
1,668,449	+		IAI47_07865	0.80	+0.7
1,668,449	+		IAI47_07865	0.80	-0.3
1,668,449	+		IAI47_07865	0.80	-1.5
1,668,449	+		IAI47_07865	0.80	-1.0
1,668,449	+		IAI47_07865	0.80	-1.9
1,668,450	-		IAI47_07865	0.80	-0.0
1,668,450	-		IAI47_07865	0.80	-0.7
1,668,450	-		IAI47_07865	0.80	+0.9
1,668,450	-		IAI47_07865	0.80	-0.9
1,668,488	+		IAI47_07865	0.83	-1.7
1,668,488	+		IAI47_07865	0.83	-2.0
1,668,489	-		IAI47_07865	0.83	-0.5
1,668,505	-		IAI47_07865	0.84	-0.9
1,668,640	-				+1.7
1,668,674	+				+0.1
1,668,675	-				-0.1
1,668,675	-				-0.1
1,668,675	-				+0.4
1,668,864	-				+3.5
1,668,893	+				+0.9
1,668,905	+				+1.0
1,668,909	-				+0.3
1,668,909	-				+1.3
1,668,934	+				+2.5
1,668,934	+				-1.6
1,668,935	-				-0.3
1,668,935	-				-2.4
1,668,935	-				+0.2
1,668,974	+				+0.6
1,668,974	+				+0.9
1,668,974	+				-0.3
1,668,974	+				-0.3
1,668,974	+				+0.3
1,668,974	+				+1.7
1,668,975	-				+0.1
1,668,975	-				-0.4
1,668,975	-				+2.1
1,668,975	-				+0.1
1,668,994	+				-1.5
1,668,994	+				+2.1
1,668,994	+				-0.3
1,668,995	-				+2.3
1,668,995	-				-1.2
1,668,995	-				+1.3
1,668,995	-				+0.2
1,668,999	+				+1.3
1,668,999	+				+0.1
1,669,000	-				-0.2
1,669,000	-				+1.8
1,669,009	+				-0.1
1,669,010	-				-0.6
1,669,013	+				-1.3
1,669,014	-				-2.0
1,669,115	+				+0.7
1,669,115	+				-1.4
1,669,116	-				+0.7
1,669,116	-				-0.5
1,669,130	+				-0.6
1,669,131	-				+0.5
1,669,131	-				+0.3
1,669,139	+				+0.3
1,669,139	+				-1.2
1,669,139	+				-0.4
1,669,139	+				-1.9
1,669,139	+				+0.3
1,669,139	+				-1.9
1,669,139	+				+1.1
1,669,139	+				-0.4
1,669,140	-				-0.8
1,669,140	-				+0.2
1,669,140	-				+0.5
1,669,140	-				-1.2
1,669,140	-				-0.8
1,669,140	-				+1.7
1,669,149	-				-1.3
1,669,149	-				+1.1
1,669,193	+				+2.4
1,669,193	+				+1.6
1,669,194	-				-0.7
1,669,194	-				+0.8
1,669,229	-				+0.1
1,669,247	-				-0.5
1,669,259	-				-1.4
1,669,272	-				-0.7
1,669,290	+				+0.1
1,669,290	+				+0.1
1,669,290	+				+0.2
1,669,290	+				-1.4
1,669,290	+				-0.8
1,669,291	-				-1.5
1,669,291	-				-1.2
1,669,291	-				-1.2
1,669,291	-				+0.1
1,669,291	-				+0.4
1,669,360	-		IAI47_07870	0.11	-0.5
1,669,518	+		IAI47_07870	0.22	-0.7
1,669,519	-		IAI47_07870	0.23	-0.8
1,669,519	-		IAI47_07870	0.23	+0.2
1,669,529	+		IAI47_07870	0.23	-2.1
1,669,529	+		IAI47_07870	0.23	-1.3
1,669,529	+		IAI47_07870	0.23	+2.0
1,669,529	+		IAI47_07870	0.23	-0.8
1,669,529	+		IAI47_07870	0.23	-0.4
1,669,530	-		IAI47_07870	0.23	-0.2
1,669,530	-		IAI47_07870	0.23	-1.8
1,669,530	-		IAI47_07870	0.23	+0.1
1,669,530	-		IAI47_07870	0.23	+0.1
1,669,530	-		IAI47_07870	0.23	-0.3
1,669,530	-		IAI47_07870	0.23	+0.1
1,669,633	+		IAI47_07870	0.31	-0.9
1,669,633	+		IAI47_07870	0.31	+1.8
1,669,633	+		IAI47_07870	0.31	-0.7
1,669,633	+		IAI47_07870	0.31	+0.0
1,669,633	+		IAI47_07870	0.31	+0.5
1,669,658	-		IAI47_07870	0.32	+0.2
1,669,770	+		IAI47_07870	0.40	-1.5
1,669,770	+		IAI47_07870	0.40	+0.7
1,669,770	+		IAI47_07870	0.40	-0.9
1,669,771	-		IAI47_07870	0.40	+0.5
1,669,783	+		IAI47_07870	0.41	+1.4
1,669,783	+		IAI47_07870	0.41	-1.3
1,669,783	+		IAI47_07870	0.41	-1.7
1,669,783	+		IAI47_07870	0.41	-0.1
1,669,783	+		IAI47_07870	0.41	+1.4
1,669,784	-		IAI47_07870	0.41	-0.9
1,669,784	-		IAI47_07870	0.41	-0.5
1,669,784	-		IAI47_07870	0.41	-0.9
1,669,808	+		IAI47_07870	0.43	-1.4
1,669,808	+		IAI47_07870	0.43	-1.1
1,669,808	+		IAI47_07870	0.43	-0.4
1,669,836	+		IAI47_07870	0.45	-0.4
1,669,836	+		IAI47_07870	0.45	+1.1
1,669,836	+		IAI47_07870	0.45	-0.7
1,669,837	-		IAI47_07870	0.45	+0.3
1,669,837	-		IAI47_07870	0.45	+0.4
1,669,837	-		IAI47_07870	0.45	-1.6
1,669,837	-		IAI47_07870	0.45	+1.0
1,669,849	+		IAI47_07870	0.46	+0.7
1,669,849	+		IAI47_07870	0.46	-1.3
1,669,849	+		IAI47_07870	0.46	-0.8
1,669,850	-		IAI47_07870	0.46	-1.4
1,669,850	-		IAI47_07870	0.46	+0.9
1,669,851	+		IAI47_07870	0.46	+0.4
1,669,851	+		IAI47_07870	0.46	-1.1
1,669,852	-		IAI47_07870	0.46	-0.6
1,669,852	-		IAI47_07870	0.46	-0.5
1,669,873	+		IAI47_07870	0.48	+0.2
1,669,874	-		IAI47_07870	0.48	+0.2
1,669,874	-		IAI47_07870	0.48	-1.8
1,669,924	+		IAI47_07870	0.51	+1.3
1,669,925	-		IAI47_07870	0.51	+0.8
1,669,964	+		IAI47_07870	0.54	-3.1
1,669,970	+		IAI47_07870	0.55	-0.9
1,669,970	+		IAI47_07870	0.55	-0.1
1,669,970	+		IAI47_07870	0.55	-1.1
1,669,970	+		IAI47_07870	0.55	-0.5
1,669,970	+		IAI47_07870	0.55	-0.8
1,669,970	+		IAI47_07870	0.55	+0.6
1,669,970	+		IAI47_07870	0.55	-0.7
1,669,970	+		IAI47_07870	0.55	-0.4
1,669,970	+		IAI47_07870	0.55	-2.3
1,669,970	+		IAI47_07870	0.55	+1.0
1,669,970	+		IAI47_07870	0.55	+0.4
1,669,970	+		IAI47_07870	0.55	-0.5
1,669,970	+		IAI47_07870	0.55	+0.6
1,669,971	-		IAI47_07870	0.55	-0.5
1,669,971	-		IAI47_07870	0.55	-1.4
1,669,971	-		IAI47_07870	0.55	-1.6
1,669,971	-		IAI47_07870	0.55	-0.8
1,669,971	-		IAI47_07870	0.55	+0.7
1,669,971	-		IAI47_07870	0.55	-0.1
1,669,971	-		IAI47_07870	0.55	-0.4
1,669,971	-		IAI47_07870	0.55	+1.1
1,669,971	-		IAI47_07870	0.55	-1.3
1,670,139	+		IAI47_07870	0.67	+1.2
1,670,139	+		IAI47_07870	0.67	+0.1
1,670,139	+		IAI47_07870	0.67	-1.2
1,670,139	+		IAI47_07870	0.67	+0.5
1,670,140	-		IAI47_07870	0.67	+1.4
1,670,140	-		IAI47_07870	0.67	+0.1
1,670,142	+		IAI47_07870	0.67	+1.1
1,670,249	+		IAI47_07870	0.74	+2.8
1,670,264	+		IAI47_07870	0.75	-1.0
1,670,278	+		IAI47_07870	0.76	+1.4
1,670,278	+		IAI47_07870	0.76	+0.3
1,670,279	-		IAI47_07870	0.76	+2.3
1,670,279	-		IAI47_07870	0.76	+1.5
1,670,279	-		IAI47_07870	0.76	-0.9
1,670,279	-		IAI47_07870	0.76	+1.2
1,670,279	-		IAI47_07870	0.76	+1.4
1,670,279	-		IAI47_07870	0.76	+0.8
1,670,279	-		IAI47_07870	0.76	+3.2
1,670,280	+		IAI47_07870	0.77	-3.0
1,670,300	+		IAI47_07870	0.78	+0.7
1,670,300	+		IAI47_07870	0.78	+0.8
1,670,301	-		IAI47_07870	0.78	-0.2
1,670,306	+		IAI47_07870	0.78	+0.9
1,670,340	+		IAI47_07870	0.81	+1.5
1,670,340	+		IAI47_07870	0.81	-1.3
1,670,341	-		IAI47_07870	0.81	-0.6
1,670,349	-		IAI47_07870	0.81	+0.0
1,670,382	+		IAI47_07870	0.84	-0.5
1,670,404	+		IAI47_07870	0.85	+0.2
1,670,404	+		IAI47_07870	0.85	+0.8
1,670,413	+		IAI47_07870	0.86	-0.8
1,670,413	+		IAI47_07870	0.86	+2.2
1,670,413	+		IAI47_07870	0.86	+1.4
1,670,413	+		IAI47_07870	0.86	-0.5
1,670,413	+		IAI47_07870	0.86	-1.1
1,670,413	+		IAI47_07870	0.86	-1.3
1,670,413	+		IAI47_07870	0.86	+0.3
1,670,413	+		IAI47_07870	0.86	+0.3
1,670,413	+		IAI47_07870	0.86	+2.4
1,670,413	+		IAI47_07870	0.86	-0.6
1,670,413	+		IAI47_07870	0.86	+0.1
1,670,413	+		IAI47_07870	0.86	+1.4
1,670,413	+		IAI47_07870	0.86	-0.9
1,670,413	+		IAI47_07870	0.86	+2.6
1,670,413	+		IAI47_07870	0.86	-0.6
1,670,413	+		IAI47_07870	0.86	-1.7
1,670,413	+		IAI47_07870	0.86	+1.3
1,670,413	+		IAI47_07870	0.86	+0.3
1,670,413	+		IAI47_07870	0.86	+0.1
1,670,413	+		IAI47_07870	0.86	-0.3
1,670,413	+		IAI47_07870	0.86	+1.1
1,670,413	+		IAI47_07870	0.86	-0.9
1,670,413	+		IAI47_07870	0.86	-0.2
1,670,413	+		IAI47_07870	0.86	-1.1
1,670,414	-		IAI47_07870	0.86	+1.2
1,670,414	-		IAI47_07870	0.86	-0.0
1,670,414	-		IAI47_07870	0.86	+1.7
1,670,414	-		IAI47_07870	0.86	-0.0
1,670,414	-		IAI47_07870	0.86	-1.2
1,670,414	-		IAI47_07870	0.86	-2.7
1,670,414	-		IAI47_07870	0.86	+2.1
1,670,414	-		IAI47_07870	0.86	+1.0
1,670,414	-		IAI47_07870	0.86	-0.4
1,670,414	-		IAI47_07870	0.86	-0.8
1,670,414	-		IAI47_07870	0.86	-2.4
1,670,414	-		IAI47_07870	0.86	-1.7
1,670,414	-		IAI47_07870	0.86	-1.5
1,670,414	-		IAI47_07870	0.86	+0.8
1,670,414	-		IAI47_07870	0.86	-0.2
1,670,414	-		IAI47_07870	0.86	+0.3
1,670,414	-		IAI47_07870	0.86	-0.1
1,670,414	-		IAI47_07870	0.86	-1.6
1,670,414	-		IAI47_07870	0.86	-0.0
1,670,414	-		IAI47_07870	0.86	+0.7
1,670,414	-		IAI47_07870	0.86	+2.6
1,670,414	-		IAI47_07870	0.86	+0.1
1,670,414	-		IAI47_07870	0.86	-0.4
1,670,559	+				+0.0
1,670,565	+				-1.4
1,670,565	+				-2.9
1,670,566	-				+0.3
1,670,566	-				+2.1
1,670,620	+				-0.6
1,670,620	+				+1.2
1,670,620	+				-0.9
1,670,620	+				-2.1
1,670,621	-				-0.8
1,670,649	+				-0.3
1,670,649	+				-2.3
1,670,650	-				-1.1
1,670,675	-				+0.5
1,670,756	+				-1.3
1,670,756	+				+1.1
1,670,757	-				+0.3
1,670,757	-				+1.6
1,670,757	-				-0.4
1,670,785	+				-0.9
1,670,785	+				-1.9
1,670,786	-				-0.2
1,670,786	-				+0.6
1,670,786	-				-0.9
1,670,789	+				-1.1
1,670,789	+				+0.1
1,670,789	+				-0.3
1,670,789	+				+0.4
1,670,789	+				-1.1
1,670,789	+				+0.7
1,670,789	+				+1.1
1,670,790	-				-0.9
1,670,790	-				+1.5
1,670,790	-				+0.3
1,670,790	-				+0.1
1,670,790	-				+0.4
1,670,790	-				-1.3
1,670,790	-				-0.1
1,670,803	+				+1.6
1,670,804	-				+2.0
1,670,804	-				+1.3
1,670,804	-				-0.8
1,670,804	-				-0.0
1,670,804	-				-0.9
1,670,848	+				-0.2
1,670,848	+				-1.4
1,670,848	+				-1.3
1,670,848	+				-0.2
1,670,879	+				+1.1
1,670,879	+				+1.3
1,670,879	+				+0.1
1,670,879	+				-0.4
1,670,879	+				+1.5
1,670,880	-				+1.1
1,670,880	-				-1.1
1,670,880	-				-0.9
1,670,960	-		IAI47_07875	0.14	-1.2
1,671,007	+		IAI47_07875	0.18	-1.6
1,671,007	+		IAI47_07875	0.18	-0.8
1,671,007	+		IAI47_07875	0.18	-0.8
1,671,007	+		IAI47_07875	0.18	+0.3
1,671,008	-		IAI47_07875	0.18	-0.9
1,671,008	-		IAI47_07875	0.18	+1.5
1,671,008	-		IAI47_07875	0.18	-0.0
1,671,008	-		IAI47_07875	0.18	+1.4
1,671,008	-		IAI47_07875	0.18	-0.3
1,671,017	+		IAI47_07875	0.19	+0.7
1,671,017	+		IAI47_07875	0.19	-1.5
1,671,017	+		IAI47_07875	0.19	+0.9
1,671,018	-		IAI47_07875	0.19	-0.3
1,671,042	-		IAI47_07875	0.21	+0.8
1,671,042	-		IAI47_07875	0.21	-2.6
1,671,131	-		IAI47_07875	0.29	-0.2
1,671,139	+		IAI47_07875	0.30	+2.3
1,671,139	+		IAI47_07875	0.30	+1.1
1,671,140	-		IAI47_07875	0.30	+0.8
1,671,170	+		IAI47_07875	0.33	+0.7
1,671,170	+		IAI47_07875	0.33	+0.1
1,671,170	+		IAI47_07875	0.33	+0.2
1,671,170	+		IAI47_07875	0.33	-0.2
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