Strain Fitness in Pantoea sp. MT58 around IAI47_21795

Experiment: Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
103,591	-		IAI47_21790	0.18	+0.5
103,613	+		IAI47_21790	0.22	-0.5
103,615	+		IAI47_21790	0.22	+1.1
103,616	-		IAI47_21790	0.23	-0.5
103,652	-		IAI47_21790	0.29	-1.2
103,652	-		IAI47_21790	0.29	+0.6
103,652	-		IAI47_21790	0.29	+0.7
103,677	+		IAI47_21790	0.33	+0.9
103,678	-		IAI47_21790	0.33	-1.7
103,678	-		IAI47_21790	0.33	+1.9
103,714	-		IAI47_21790	0.39	+0.2
103,760	+		IAI47_21790	0.47	+0.4
103,782	+		IAI47_21790	0.50	-1.2
103,782	+		IAI47_21790	0.50	-1.9
103,782	+		IAI47_21790	0.50	+1.1
103,919	-		IAI47_21790	0.73	+1.8
103,919	-		IAI47_21790	0.73	-1.2
103,943	+		IAI47_21790	0.77	+0.1
103,944	-		IAI47_21790	0.78	+0.2
104,023	-				-0.8
104,032	+				-0.1
104,032	+				-0.9
104,033	-				+1.3
104,035	+				-0.4
104,035	+				-1.7
104,139	+				-0.3
104,140	-				-0.9
104,143	+				+0.6
104,145	+				-0.3
104,157	-				+0.9
104,187	-				-0.4
104,256	+				-0.7
104,257	-				+0.9
104,262	-				+0.8
104,262	-				-1.0
104,265	+				+1.1
104,266	-				+0.2
104,273	+				+0.7
104,280	-				+0.1
104,280	-				-2.0
104,287	+				+0.9
104,315	-				+0.2
104,359	+				+1.2
104,384	+				-0.7
104,407	-				+0.2
104,418	+				+0.4
104,418	+				+0.6
104,419	-				+0.2
104,478	+				+1.0
104,478	+				+1.2
104,479	-				+0.2
104,479	-				+1.2
104,486	-				+1.5
104,539	+				-1.8
104,545	+				-0.4
104,545	+				-0.8
104,546	-				+1.2
104,546	-				+0.3
104,550	-				+3.2
104,581	+				+2.1
104,648	+				+0.2
104,648	+				-1.1
104,660	+				-0.6
104,685	+				+1.6
104,701	+				+0.8
104,701	+				-1.5
104,701	+				-1.7
104,702	-				+0.4
104,702	-				+0.2
104,702	-				-0.8
104,702	-				+1.2
104,702	-				-0.7
104,702	-				-0.6
104,702	-				-0.6
104,810	+		IAI47_21795	0.16	-0.1
104,810	+		IAI47_21795	0.16	-0.5
104,810	+		IAI47_21795	0.16	+1.8
104,810	+		IAI47_21795	0.16	-0.8
104,811	-		IAI47_21795	0.16	+0.4
104,811	-		IAI47_21795	0.16	+1.2
104,811	-		IAI47_21795	0.16	+0.1
104,811	-		IAI47_21795	0.16	+0.7
104,811	-		IAI47_21795	0.16	-0.5
104,811	-		IAI47_21795	0.16	+1.1
104,814	+		IAI47_21795	0.16	+0.1
104,814	+		IAI47_21795	0.16	+0.0
104,814	+		IAI47_21795	0.16	+0.2
104,814	+		IAI47_21795	0.16	-0.6
104,815	-		IAI47_21795	0.16	-1.2
104,815	-		IAI47_21795	0.16	-2.8
104,815	-		IAI47_21795	0.16	-2.3
104,830	-		IAI47_21795	0.17	-0.7
104,870	+		IAI47_21795	0.20	+0.6
104,892	-		IAI47_21795	0.21	-1.5
104,906	+		IAI47_21795	0.22	+0.3
104,906	+		IAI47_21795	0.22	+0.6
104,906	+		IAI47_21795	0.22	+2.2
104,906	+		IAI47_21795	0.22	+1.6
104,906	+		IAI47_21795	0.22	+0.3
104,907	-		IAI47_21795	0.22	+0.1
104,907	-		IAI47_21795	0.22	-2.6
104,910	-		IAI47_21795	0.22	-0.4
104,910	-		IAI47_21795	0.22	+0.6
104,910	-		IAI47_21795	0.22	+0.9
104,910	-		IAI47_21795	0.22	+1.2
104,910	-		IAI47_21795	0.22	+0.7
105,036	-		IAI47_21795	0.31	-1.4
105,064	+		IAI47_21795	0.33	-0.5
105,065	-		IAI47_21795	0.33	-0.7
105,108	+		IAI47_21795	0.36	+0.7
105,109	-		IAI47_21795	0.36	-0.3
105,149	+		IAI47_21795	0.39	-1.2
105,150	-		IAI47_21795	0.39	+1.9
105,173	+		IAI47_21795	0.40	-0.4
105,203	+		IAI47_21795	0.42	-1.2
105,204	-		IAI47_21795	0.42	+0.4
105,204	-		IAI47_21795	0.42	+1.5
105,210	+		IAI47_21795	0.43	+0.2
105,210	+		IAI47_21795	0.43	+1.4
105,210	+		IAI47_21795	0.43	+0.0
105,210	+		IAI47_21795	0.43	-0.3
105,210	+		IAI47_21795	0.43	+0.1
105,211	-		IAI47_21795	0.43	+1.5
105,211	-		IAI47_21795	0.43	-0.8
105,211	-		IAI47_21795	0.43	-0.6
105,211	-				+0.7
105,211	-		IAI47_21795	0.43	+1.6
105,211	-		IAI47_21795	0.43	+0.8
105,211	-		IAI47_21795	0.43	+0.2
105,228	-		IAI47_21795	0.44	-0.6
105,273	+		IAI47_21795	0.47	-1.1
105,274	-		IAI47_21795	0.47	-0.3
105,274	-		IAI47_21795	0.47	-1.6
105,289	-		IAI47_21795	0.48	+0.4
105,332	+		IAI47_21795	0.51	-1.6
105,332	+		IAI47_21795	0.51	-0.9
105,332	+		IAI47_21795	0.51	-0.7
105,333	-		IAI47_21795	0.51	-0.5
105,336	+		IAI47_21795	0.51	+0.2
105,336	+		IAI47_21795	0.51	+0.8
105,336	+		IAI47_21795	0.51	-0.0
105,336	+		IAI47_21795	0.51	+1.1
105,336	+		IAI47_21795	0.51	-2.3
105,336	+		IAI47_21795	0.51	-0.6
105,336	+		IAI47_21795	0.51	-1.6
105,337	-		IAI47_21795	0.51	-0.2
105,337	-		IAI47_21795	0.51	-1.4
105,337	-		IAI47_21795	0.51	-2.1
105,349	-		IAI47_21795	0.52	+0.7
105,349	-		IAI47_21795	0.52	-1.3
105,381	+		IAI47_21795	0.54	+2.4
105,381	+		IAI47_21795	0.54	-0.2
105,381	+		IAI47_21795	0.54	-0.9
105,381	+		IAI47_21795	0.54	-0.5
105,381	+		IAI47_21795	0.54	-0.4
105,382	-		IAI47_21795	0.54	-1.2
105,382	-		IAI47_21795	0.54	+1.1
105,382	-		IAI47_21795	0.54	-0.3
105,382	-		IAI47_21795	0.54	-0.4
105,392	+		IAI47_21795	0.55	-1.2
105,392	+		IAI47_21795	0.55	+1.3
105,392	+		IAI47_21795	0.55	+1.0
105,393	-		IAI47_21795	0.55	+0.4
105,393	-		IAI47_21795	0.55	-0.5
105,393	-		IAI47_21795	0.55	-0.1
105,410	-		IAI47_21795	0.56	-1.0
105,410	-		IAI47_21795	0.56	-1.3
105,427	-		IAI47_21795	0.58	-0.6
105,437	+		IAI47_21795	0.58	+0.7
105,438	-		IAI47_21795	0.58	-0.6
105,492	-		IAI47_21795	0.62	-0.4
105,545	+		IAI47_21795	0.66	+0.6
105,545	+		IAI47_21795	0.66	-1.2
105,545	+		IAI47_21795	0.66	-0.9
105,545	+		IAI47_21795	0.66	+1.8
105,546	-		IAI47_21795	0.66	-0.9
105,548	+		IAI47_21795	0.66	-1.6
105,548	+		IAI47_21795	0.66	+0.9
105,548	+		IAI47_21795	0.66	-0.3
105,548	+		IAI47_21795	0.66	-1.5
105,548	+		IAI47_21795	0.66	+1.3
105,549	-		IAI47_21795	0.66	-2.6
105,549	-		IAI47_21795	0.66	+0.0
105,549	-		IAI47_21795	0.66	-0.3
105,549	-		IAI47_21795	0.66	-0.8
105,549	-		IAI47_21795	0.66	+1.8
105,554	+		IAI47_21795	0.66	-1.8
105,555	-		IAI47_21795	0.66	-0.1
105,674	-		IAI47_21795	0.74	-0.4
105,674	-		IAI47_21795	0.74	-0.7
105,686	+		IAI47_21795	0.75	+1.7
105,686	+		IAI47_21795	0.75	+0.4
105,686	+		IAI47_21795	0.75	-0.7
105,687	-		IAI47_21795	0.75	+0.1
105,737	+		IAI47_21795	0.79	-0.6
105,737	+		IAI47_21795	0.79	-0.8
105,737	+		IAI47_21795	0.79	+1.7
105,738	-		IAI47_21795	0.79	+0.7
105,738	-		IAI47_21795	0.79	+0.7
105,738	-		IAI47_21795	0.79	-0.1
105,738	-		IAI47_21795	0.79	+0.9
105,857	+		IAI47_21795	0.87	-0.7
105,857	+		IAI47_21795	0.87	+0.0
105,857	+		IAI47_21795	0.87	-0.8
105,857	+		IAI47_21795	0.87	+0.6
105,857	+		IAI47_21795	0.87	-0.7
105,858	-		IAI47_21795	0.87	+0.2
105,858	-		IAI47_21795	0.87	-1.8
105,858	-		IAI47_21795	0.87	-1.1
105,858	-		IAI47_21795	0.87	+3.5
105,860	+		IAI47_21795	0.87	-0.4
105,860	+		IAI47_21795	0.87	+0.5
105,860	+		IAI47_21795	0.87	+0.2
105,860	+		IAI47_21795	0.87	+0.2
105,860	+		IAI47_21795	0.87	+0.9
105,860	+		IAI47_21795	0.87	-0.3
105,860	+		IAI47_21795	0.87	-0.6
105,861	-		IAI47_21795	0.87	+0.7
105,861	-		IAI47_21795	0.87	+0.6
105,861	-		IAI47_21795	0.87	-1.3
105,861	-		IAI47_21795	0.87	-2.0
105,861	-		IAI47_21795	0.87	-1.9
105,935	+				-0.6
105,935	+				-0.3
105,936	-				+0.1
105,936	-				+0.7
105,999	+				-1.1
105,999	+				+1.3
105,999	+				+0.7
106,000	-				-0.0
106,000	-				+0.8
106,000	-				-1.7
106,000	-				+1.5
106,000	-				+1.0
106,000	-				-0.1
106,002	+				-0.7
106,002	+				+1.2
106,003	-				-1.1
106,003	-				+2.0
106,003	-				-1.1
106,003	-				-1.6
106,003	-				-0.6
106,057	-				-1.0
106,067	+				-0.3
106,067	+				+1.1
106,071	-				+1.9
106,108	+				-0.9
106,108	+				-0.1
106,108	+				+1.2
106,108	+				+1.2
106,109	-				+0.7
106,109	-				-0.4
106,109	-				+0.1
106,109	-				-1.8
106,109	-				-1.8
106,131	+				+0.5
106,193	+				+0.2
106,206	-				-0.0
106,290	+				+0.2
106,298	+				+0.7
106,298	+				+1.6
106,298	+				+2.9
106,299	-				-0.6
106,299	-				-1.5
106,320	-				-2.3
106,326	+				-0.5
106,326	+				+3.0
106,326	+				+0.2
106,326	+				-0.1
106,326	+				+0.8
106,327	-				-0.2
106,335	+				-0.6
106,335	+				-2.1
106,336	-				+0.8
106,390	+				+0.2
106,391	-				-1.6
106,391	-				+0.2
106,432	+		IAI47_21800	0.15	-0.9
106,433	-		IAI47_21800	0.16	-0.8
106,530	+		IAI47_21800	0.33	-1.1
106,531	-		IAI47_21800	0.33	-0.3
106,531	-		IAI47_21800	0.33	+0.7
106,531	-		IAI47_21800	0.33	+0.6
106,555	+		IAI47_21800	0.37	+1.0
106,556	-		IAI47_21800	0.37	-0.6
106,556	-		IAI47_21800	0.37	-1.3
106,556	-		IAI47_21800	0.37	+0.8
106,556	-		IAI47_21800	0.37	+0.2
106,556	-		IAI47_21800	0.37	-0.1
106,568	+		IAI47_21800	0.39	-0.1
106,568	+		IAI47_21800	0.39	+0.4
106,568	+		IAI47_21800	0.39	-0.2
106,569	-		IAI47_21800	0.39	-0.8
106,569	-		IAI47_21800	0.39	+0.1
106,569	-		IAI47_21800	0.39	+2.0
106,569	-		IAI47_21800	0.39	+0.1
106,569	-		IAI47_21800	0.39	+0.5
106,569	-		IAI47_21800	0.39	+0.9
106,579	-		IAI47_21800	0.41	-0.1
106,621	+		IAI47_21800	0.49	-0.5
106,621	+		IAI47_21800	0.49	-1.7
106,621	+		IAI47_21800	0.49	+1.1
106,621	+		IAI47_21800	0.49	-0.8
106,621	+		IAI47_21800	0.49	-0.6
106,621	+		IAI47_21800	0.49	-0.5
106,622	-		IAI47_21800	0.49	-0.5
106,672	+		IAI47_21800	0.58	+0.1
106,672	+		IAI47_21800	0.58	+0.7
106,673	-		IAI47_21800	0.58	+1.2
106,673	-		IAI47_21800	0.58	+1.6
106,686	-		IAI47_21800	0.60	-0.3
106,736	+		IAI47_21800	0.69	+0.2
106,737	-		IAI47_21800	0.69	+0.5
106,811	+		IAI47_21800	0.82	+0.4
106,811	+		IAI47_21800	0.82	+0.7
106,811	+		IAI47_21800	0.82	-1.8
106,811	+		IAI47_21800	0.82	+0.1
106,812	-		IAI47_21800	0.82	-0.1
106,812	-		IAI47_21800	0.82	-0.0
106,815	+		IAI47_21800	0.83	+1.7
106,815	+		IAI47_21800	0.83	+0.0
106,815	+		IAI47_21800	0.83	+0.0
106,815	+		IAI47_21800	0.83	+0.5
106,815	+		IAI47_21800	0.83	+1.4
106,815	+		IAI47_21800	0.83	+0.2
106,816	-		IAI47_21800	0.83	+1.1
106,816	-		IAI47_21800	0.83	+0.4
106,816	-		IAI47_21800	0.83	-1.7
106,816	-		IAI47_21800	0.83	-0.1
106,820	+		IAI47_21800	0.84	+1.8
106,820	+		IAI47_21800	0.84	-1.4
106,918	+				+1.8
106,918	+				-1.3
106,919	-				+0.2
106,921	+				+3.9
106,921	+				+0.9
106,922	-				+0.7
106,922	-				+1.4
106,922	-				-1.1
106,922	-				+0.7
106,956	-				+1.9
106,963	+				-1.8
106,964	-				-0.8
106,964	-				-2.2