Strain Fitness in Pantoea sp. MT58 around IAI47_14520

Experiment: Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
3,066,207	-		IAI47_14515	0.74	+0.3
3,066,242	+		IAI47_14515	0.75	-0.7
3,066,242	+		IAI47_14515	0.75	-1.1
3,066,242	+		IAI47_14515	0.75	+0.8
3,066,243	-		IAI47_14515	0.75	-1.2
3,066,312	+		IAI47_14515	0.77	-0.3
3,066,312	+		IAI47_14515	0.77	-1.4
3,066,312	+		IAI47_14515	0.77	-0.9
3,066,312	+		IAI47_14515	0.77	+0.1
3,066,312	+		IAI47_14515	0.77	+0.4
3,066,313	-		IAI47_14515	0.77	+0.4
3,066,313	-		IAI47_14515	0.77	-1.1
3,066,313	-		IAI47_14515	0.77	+2.1
3,066,336	+		IAI47_14515	0.78	+0.4
3,066,336	+		IAI47_14515	0.78	-0.5
3,066,336	+		IAI47_14515	0.78	-0.9
3,066,336	+		IAI47_14515	0.78	+0.5
3,066,337	-		IAI47_14515	0.78	+0.2
3,066,337	-		IAI47_14515	0.78	+1.5
3,066,337	-		IAI47_14515	0.78	-2.6
3,066,337	-		IAI47_14515	0.78	-1.8
3,066,337	-		IAI47_14515	0.78	+0.8
3,066,337	-		IAI47_14515	0.78	+0.4
3,066,450	+		IAI47_14515	0.81	+0.1
3,066,471	+		IAI47_14515	0.82	+0.5
3,066,471	+		IAI47_14515	0.82	-1.9
3,066,471	+		IAI47_14515	0.82	+1.1
3,066,471	+		IAI47_14515	0.82	+1.8
3,066,471	+		IAI47_14515	0.82	+0.0
3,066,472	-		IAI47_14515	0.82	+0.4
3,066,510	+		IAI47_14515	0.83	-1.3
3,066,510	+		IAI47_14515	0.83	-0.6
3,066,510	+		IAI47_14515	0.83	-0.5
3,066,510	+		IAI47_14515	0.83	-0.1
3,066,510	+		IAI47_14515	0.83	-0.4
3,066,510	+		IAI47_14515	0.83	+0.2
3,066,510	+		IAI47_14515	0.83	-0.0
3,066,510	+		IAI47_14515	0.83	-0.7
3,066,510	+		IAI47_14515	0.83	-0.7
3,066,510	+		IAI47_14515	0.83	-0.7
3,066,511	-		IAI47_14515	0.83	+0.3
3,066,511	-		IAI47_14515	0.83	+0.9
3,066,511	-		IAI47_14515	0.83	+2.8
3,066,511	-		IAI47_14515	0.83	+0.6
3,066,515	+		IAI47_14515	0.83	-1.2
3,066,515	+		IAI47_14515	0.83	+0.0
3,066,515	+		IAI47_14515	0.83	+0.1
3,066,515	+		IAI47_14515	0.83	+1.3
3,066,515	+		IAI47_14515	0.83	+0.1
3,066,515	+		IAI47_14515	0.83	-0.7
3,066,515	+		IAI47_14515	0.83	+1.5
3,066,516	-		IAI47_14515	0.83	+0.0
3,066,516	-		IAI47_14515	0.83	+1.0
3,066,516	-		IAI47_14515	0.83	+1.8
3,066,516	-		IAI47_14515	0.83	+1.0
3,066,516	-		IAI47_14515	0.83	-1.0
3,066,516	-		IAI47_14515	0.83	-2.3
3,066,516	-		IAI47_14515	0.83	-0.1
3,066,516	-		IAI47_14515	0.83	+0.1
3,066,555	+		IAI47_14515	0.85	-0.9
3,066,556	-		IAI47_14515	0.85	-0.4
3,066,556	-		IAI47_14515	0.85	+1.1
3,066,556	-		IAI47_14515	0.85	-0.1
3,066,584	+		IAI47_14515	0.86	+1.5
3,066,584	+		IAI47_14515	0.86	-1.2
3,066,585	-		IAI47_14515	0.86	-0.7
3,066,627	-		IAI47_14515	0.87	-0.3
3,066,627	-		IAI47_14515	0.87	-1.5
3,066,643	+		IAI47_14515	0.87	-0.3
3,066,643	+		IAI47_14515	0.87	+1.3
3,066,644	-		IAI47_14515	0.87	-0.3
3,066,644	-		IAI47_14515	0.87	-1.1
3,066,644	-		IAI47_14515	0.87	-0.7
3,066,644	-		IAI47_14515	0.87	-0.7
3,066,647	+		IAI47_14515	0.88	+2.5
3,066,647	+		IAI47_14515	0.88	+0.2
3,066,647	+		IAI47_14515	0.88	-1.9
3,066,647	+		IAI47_14515	0.88	-0.3
3,066,647	+		IAI47_14515	0.88	-0.7
3,066,647	+		IAI47_14515	0.88	-2.0
3,066,647	+		IAI47_14515	0.88	-0.7
3,066,647	+		IAI47_14515	0.88	-2.5
3,066,648	-		IAI47_14515	0.88	+0.0
3,066,648	-		IAI47_14515	0.88	-0.9
3,066,648	-		IAI47_14515	0.88	-0.9
3,066,648	-		IAI47_14515	0.88	-1.1
3,066,648	-		IAI47_14515	0.88	-0.2
3,066,648	-		IAI47_14515	0.88	-0.9
3,066,648	-		IAI47_14515	0.88	+1.5
3,066,657	+		IAI47_14515	0.88	-0.2
3,066,657	+		IAI47_14515	0.88	-0.1
3,066,657	+		IAI47_14515	0.88	+1.2
3,066,657	+		IAI47_14515	0.88	-0.1
3,066,658	-		IAI47_14515	0.88	-0.6
3,066,658	-		IAI47_14515	0.88	-0.7
3,066,658	-		IAI47_14515	0.88	+0.6
3,066,658	-		IAI47_14515	0.88	-0.4
3,066,658	-		IAI47_14515	0.88	-0.6
3,066,673	+		IAI47_14515	0.88	+1.6
3,066,713	+		IAI47_14515	0.90	-1.6
3,066,713	+		IAI47_14515	0.90	-0.2
3,066,713	+		IAI47_14515	0.90	-0.1
3,066,714	-		IAI47_14515	0.90	-1.2
3,066,714	-		IAI47_14515	0.90	-0.3
3,066,714	-		IAI47_14515	0.90	-0.9
3,066,714	-		IAI47_14515	0.90	+0.7
3,066,728	+				+0.3
3,066,788	+				-1.1
3,066,788	+				-0.6
3,066,788	+				-0.2
3,066,789	-				-2.1
3,066,789	-				-0.1
3,066,789	-				-1.0
3,066,803	+				-0.6
3,066,803	+				-0.1
3,066,827	+				+0.0
3,066,827	+				-0.7
3,066,827	+				+0.5
3,066,827	+				+0.7
3,066,890	-				-1.9
3,066,893	+				-0.3
3,066,893	+				-0.2
3,066,893	+				+0.7
3,066,893	+				-1.5
3,066,893	+				-0.9
3,066,893	+				-2.2
3,066,894	-				+0.8
3,066,902	-				-2.2
3,066,912	-				+0.3
3,066,967	+				-0.8
3,066,967	+				-0.7
3,066,968	-				+0.1
3,066,968	-				-1.8
3,066,968	-				+0.1
3,066,968	-				+0.9
3,067,026	-				-2.1
3,067,026	-				+0.0
3,067,026	-				+0.3
3,067,038	+				+0.8
3,067,038	+				+0.6
3,067,045	+				-0.7
3,067,045	+				+0.2
3,067,045	+				+0.1
3,067,046	-				-0.1
3,067,046	-				-1.0
3,067,079	-				+1.9
3,067,122	+				-0.1
3,067,123	-				+0.1
3,067,126	-				+0.2
3,067,126	-				-0.1
3,067,126	-				-0.7
3,067,201	+				+0.9
3,067,201	+				+0.9
3,067,201	+				+1.0
3,067,202	-				+0.5
3,067,202	-				+1.5
3,067,202	-				+2.0
3,067,213	+				+1.2
3,067,227	-				+0.9
3,067,289	-		IAI47_14520	0.33	-0.7
3,067,289	-		IAI47_14520	0.33	-0.1
3,067,289	-		IAI47_14520	0.33	-2.2
3,067,331	+		IAI47_14520	0.49	-1.0
3,067,331	+		IAI47_14520	0.49	+0.3
3,067,331	+		IAI47_14520	0.49	-0.3
3,067,332	-		IAI47_14520	0.50	+0.9
3,067,332	-		IAI47_14520	0.50	+2.1
3,067,371	-		IAI47_14520	0.65	-1.6
3,067,396	+		IAI47_14520	0.74	-1.1
3,067,397	-		IAI47_14520	0.75	+1.2
3,067,420	+		IAI47_14520	0.84	+1.4
3,067,421	-		IAI47_14520	0.84	+1.1
3,067,460	+				+0.2
3,067,460	+				-0.1
3,067,460	+				-0.3
3,067,461	-				+0.6
3,067,461	-				+1.2
3,067,461	-				+0.3
3,067,473	+				-0.8
3,067,473	+				+0.4
3,067,473	+				+1.6
3,067,474	-				+1.2
3,067,474	-				-1.6
3,067,476	+				+0.9
3,067,476	+				-0.8
3,067,476	+				-0.4
3,067,476	+				+0.9
3,067,476	+				-2.2
3,067,476	+				-0.6
3,067,476	+				-1.3
3,067,476	+				+1.1
3,067,476	+				-1.0
3,067,477	-				-0.7
3,067,477	-				+0.5
3,067,477	-				-1.1
3,067,477	-				+0.1
3,067,477	-				-0.9
3,067,477	-				+2.2
3,067,544	+		IAI47_14525	0.55	-0.2
3,067,545	-		IAI47_14525	0.56	+1.6
3,067,545	-		IAI47_14525	0.56	+0.5
3,067,545	-		IAI47_14525	0.56	-0.5
3,067,545	-		IAI47_14525	0.56	+0.1
3,067,555	+		IAI47_14525	0.63	+0.7
3,067,555	+		IAI47_14525	0.63	+1.1
3,067,573	+		IAI47_14525	0.76	-0.3
3,067,573	+		IAI47_14525	0.76	+0.1
3,067,573	+		IAI47_14525	0.76	+0.0
3,067,574	-		IAI47_14525	0.77	-1.1
3,067,574	-		IAI47_14525	0.77	-0.8
3,067,581	+		IAI47_14525	0.82	+0.1
3,067,581	+		IAI47_14525	0.82	-0.6
3,067,581	+		IAI47_14525	0.82	-0.7
3,067,582	-		IAI47_14525	0.82	+0.4
3,067,582	-		IAI47_14525	0.82	-1.9
3,067,582	-		IAI47_14525	0.82	-1.1
3,067,582	-		IAI47_14525	0.82	-1.5
3,067,604	+				-2.2
3,067,604	+				+1.2
3,067,605	-				+0.7
3,067,605	-				-0.2
3,067,605	-				-0.5
3,067,647	+				+1.0
3,067,648	-				-0.0
3,067,653	+				-1.8
3,067,653	+				+0.3
3,067,653	+				-1.6
3,067,653	+				-1.1
3,067,654	-				-1.6
3,067,654	-				+0.5
3,067,654	-				-0.9
3,067,660	+				+0.2
3,067,660	+				+1.1
3,067,660	+				-0.7
3,067,660	+				-1.2
3,067,660	+				+0.7
3,067,660	+				-1.7
3,067,661	-				+1.7
3,067,661	-				+0.9
3,067,661	-				-1.1
3,067,661	-				-0.2
3,067,661	-				-0.9
3,067,661	-				+1.7
3,067,684	+				+2.2
3,067,685	-				-0.5
3,067,685	-				-1.7
3,067,685	-				+2.2
3,067,685	-				-1.9
3,067,690	+				-0.7
3,067,690	+				-0.1
3,067,690	+				-1.2
3,067,704	+				+2.2
3,067,705	-				+0.9
3,067,785	-		IAI47_14530	0.15	-1.3
3,067,827	+		IAI47_14530	0.20	+0.7
3,067,827	+		IAI47_14530	0.20	+2.2
3,067,828	-		IAI47_14530	0.20	-0.9
3,067,828	-		IAI47_14530	0.20	-1.2
3,067,828	-		IAI47_14530	0.20	+0.7
3,067,828	-		IAI47_14530	0.20	-0.7
3,067,828	-		IAI47_14530	0.20	+0.6
3,067,834	+		IAI47_14530	0.21	-0.6
3,067,834	+		IAI47_14530	0.21	-0.5
3,067,835	-		IAI47_14530	0.21	-0.2
3,067,835	-		IAI47_14530	0.21	+1.0
3,067,863	-		IAI47_14530	0.24	+0.4
3,067,863	-		IAI47_14530	0.24	-1.8
3,067,900	+		IAI47_14530	0.28	-0.2
3,067,900	+		IAI47_14530	0.28	+0.0
3,067,935	+		IAI47_14530	0.32	-0.2
3,067,936	-		IAI47_14530	0.32	+0.6
3,067,951	-		IAI47_14530	0.34	+1.7
3,067,951	-		IAI47_14530	0.34	-1.0
3,067,951	-		IAI47_14530	0.34	-2.7
3,067,981	+		IAI47_14530	0.37	+3.9
3,067,981	+		IAI47_14530	0.37	-0.2
3,067,982	-		IAI47_14530	0.38	-2.5
3,067,999	+		IAI47_14530	0.39	+0.7
3,067,999	+		IAI47_14530	0.39	+1.5
3,068,026	+		IAI47_14530	0.43	+1.3
3,068,026	+		IAI47_14530	0.43	+0.2
3,068,027	-		IAI47_14530	0.43	+2.1
3,068,048	+		IAI47_14530	0.45	+0.6
3,068,048	+		IAI47_14530	0.45	+1.5
3,068,049	-		IAI47_14530	0.45	+0.8
3,068,049	-		IAI47_14530	0.45	-1.1
3,068,049	-		IAI47_14530	0.45	+0.7
3,068,049	-		IAI47_14530	0.45	-1.5
3,068,049	-		IAI47_14530	0.45	+1.0
3,068,052	+		IAI47_14530	0.46	+0.1
3,068,052	+		IAI47_14530	0.46	-0.8
3,068,052	+		IAI47_14530	0.46	+1.9
3,068,052	+		IAI47_14530	0.46	-0.3
3,068,052	+		IAI47_14530	0.46	+0.1
3,068,052	+		IAI47_14530	0.46	-1.0
3,068,053	+		IAI47_14530	0.46	+0.8
3,068,134	+		IAI47_14530	0.55	+0.0
3,068,134	+		IAI47_14530	0.55	+0.7
3,068,134	+		IAI47_14530	0.55	-1.1
3,068,182	+		IAI47_14530	0.60	+0.3
3,068,356	+		IAI47_14530	0.80	-0.9
3,068,356	+		IAI47_14530	0.80	-0.9
3,068,357	-		IAI47_14530	0.80	+0.2
3,068,357	-		IAI47_14530	0.80	+1.5
3,068,390	+		IAI47_14530	0.84	+1.2
3,068,390	+		IAI47_14530	0.84	+2.3
3,068,390	+		IAI47_14530	0.84	+0.9
3,068,391	-		IAI47_14530	0.84	+0.2
3,068,425	+		IAI47_14530	0.88	+1.1
3,068,425	+		IAI47_14530	0.88	+0.5
3,068,425	+		IAI47_14530	0.88	-0.8
3,068,425	+		IAI47_14530	0.88	+0.6
3,068,425	+		IAI47_14530	0.88	+0.0
3,068,425	+		IAI47_14530	0.88	+0.7
3,068,426	-		IAI47_14530	0.88	-1.2
3,068,426	-		IAI47_14530	0.88	+0.9
3,068,441	-		IAI47_14530	0.90	+0.3