Strain Fitness in Pantoea sp. MT58 around IAI47_14440

Experiment: Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
3,049,794	+		IAI47_14435	0.31	-0.4
3,049,794	+		IAI47_14435	0.31	-2.7
3,049,795	-		IAI47_14435	0.31	+0.6
3,049,817	+		IAI47_14435	0.32	+0.3
3,049,829	+		IAI47_14435	0.33	-0.8
3,049,829	+		IAI47_14435	0.33	+0.9
3,049,829	+		IAI47_14435	0.33	-1.3
3,049,829	+		IAI47_14435	0.33	-0.2
3,049,829	+		IAI47_14435	0.33	-0.5
3,049,830	-		IAI47_14435	0.33	-0.1
3,049,830	-		IAI47_14435	0.33	+0.3
3,049,830	-		IAI47_14435	0.33	-2.0
3,049,830	-		IAI47_14435	0.33	-1.4
3,049,884	+		IAI47_14435	0.37	+1.3
3,049,884	+		IAI47_14435	0.37	+0.8
3,049,885	-		IAI47_14435	0.38	-1.1
3,049,885	-		IAI47_14435	0.38	-0.1
3,049,885	-		IAI47_14435	0.38	+0.3
3,049,885	-		IAI47_14435	0.38	+0.1
3,049,939	+		IAI47_14435	0.42	-0.6
3,049,995	+		IAI47_14435	0.46	-0.9
3,050,057	+		IAI47_14435	0.51	+0.1
3,050,057	+		IAI47_14435	0.51	+0.1
3,050,058	-		IAI47_14435	0.51	-0.5
3,050,058	-		IAI47_14435	0.51	+0.7
3,050,058	-		IAI47_14435	0.51	-0.4
3,050,117	+		IAI47_14435	0.55	+1.2
3,050,117	+		IAI47_14435	0.55	-0.2
3,050,117	+		IAI47_14435	0.55	+2.7
3,050,118	-		IAI47_14435	0.55	-2.0
3,050,118	-		IAI47_14435	0.55	-0.5
3,050,118	-		IAI47_14435	0.55	+0.8
3,050,118	-		IAI47_14435	0.55	-0.1
3,050,129	-		IAI47_14435	0.56	-1.3
3,050,129	-		IAI47_14435	0.56	+1.3
3,050,129	-		IAI47_14435	0.56	-0.2
3,050,179	+		IAI47_14435	0.60	+0.1
3,050,179	+		IAI47_14435	0.60	+0.7
3,050,179	+		IAI47_14435	0.60	-1.3
3,050,179	+		IAI47_14435	0.60	-0.7
3,050,180	-		IAI47_14435	0.60	+0.4
3,050,180	-		IAI47_14435	0.60	-1.6
3,050,205	+		IAI47_14435	0.62	+0.1
3,050,205	+		IAI47_14435	0.62	-1.1
3,050,205	+		IAI47_14435	0.62	+0.3
3,050,206	-		IAI47_14435	0.62	-2.8
3,050,257	-		IAI47_14435	0.66	-1.5
3,050,279	+		IAI47_14435	0.68	-1.1
3,050,279	+		IAI47_14435	0.68	+3.5
3,050,279	+		IAI47_14435	0.68	-1.0
3,050,279	+		IAI47_14435	0.68	-1.3
3,050,279	+		IAI47_14435	0.68	-2.3
3,050,279	+		IAI47_14435	0.68	-0.5
3,050,280	-		IAI47_14435	0.68	+0.5
3,050,315	+		IAI47_14435	0.71	-1.8
3,050,315	+		IAI47_14435	0.71	-0.6
3,050,315	+		IAI47_14435	0.71	+1.5
3,050,315	+		IAI47_14435	0.71	-0.6
3,050,315	+		IAI47_14435	0.71	-1.1
3,050,315	+		IAI47_14435	0.71	-0.9
3,050,316	-		IAI47_14435	0.71	+0.9
3,050,316	-		IAI47_14435	0.71	+2.2
3,050,316	-		IAI47_14435	0.71	+0.3
3,050,316	-		IAI47_14435	0.71	-0.4
3,050,316	-		IAI47_14435	0.71	+0.5
3,050,320	-		IAI47_14435	0.71	+0.4
3,050,321	+		IAI47_14435	0.71	-0.6
3,050,321	+		IAI47_14435	0.71	-1.9
3,050,321	+		IAI47_14435	0.71	-0.7
3,050,322	-		IAI47_14435	0.71	+2.6
3,050,346	+		IAI47_14435	0.73	-0.3
3,050,346	+		IAI47_14435	0.73	-0.9
3,050,347	-		IAI47_14435	0.73	-0.1
3,050,355	+		IAI47_14435	0.74	+1.7
3,050,355	+		IAI47_14435	0.74	+1.6
3,050,355	+		IAI47_14435	0.74	+0.1
3,050,355	+		IAI47_14435	0.74	+0.4
3,050,356	-		IAI47_14435	0.74	+0.5
3,050,356	-		IAI47_14435	0.74	-2.1
3,050,356	-		IAI47_14435	0.74	+1.5
3,050,356	-		IAI47_14435	0.74	+0.1
3,050,389	+		IAI47_14435	0.76	+0.5
3,050,400	+		IAI47_14435	0.77	-0.8
3,050,400	+		IAI47_14435	0.77	-0.7
3,050,401	-		IAI47_14435	0.77	+0.1
3,050,401	-		IAI47_14435	0.77	+0.2
3,050,412	+		IAI47_14435	0.78	+0.1
3,050,413	-		IAI47_14435	0.78	-0.3
3,050,469	+		IAI47_14435	0.82	-0.7
3,050,469	+		IAI47_14435	0.82	+0.4
3,050,471	+		IAI47_14435	0.83	-1.5
3,050,471	+		IAI47_14435	0.83	+1.2
3,050,471	+		IAI47_14435	0.83	-0.7
3,050,471	+		IAI47_14435	0.83	-0.6
3,050,472	-		IAI47_14435	0.83	+0.9
3,050,529	-		IAI47_14435	0.87	-0.6
3,050,586	+				+1.2
3,050,632	+				-0.2
3,050,632	+				+0.9
3,050,633	-				+2.2
3,050,633	-				-0.9
3,050,633	-				+0.5
3,050,633	-				-0.7
3,050,633	-				-1.4
3,050,663	+				+1.8
3,050,663	+				+2.3
3,050,663	+				+1.2
3,050,663	+				-0.8
3,050,663	+				+0.1
3,050,734	+				-2.1
3,050,734	+				-0.9
3,050,734	+				+0.9
3,050,734	+				+0.9
3,050,735	-				-1.4
3,050,758	-				-0.9
3,050,758	-				-0.8
3,050,795	-				-0.1
3,050,824	+				-0.1
3,050,824	+				-1.3
3,050,824	+				-1.5
3,050,824	+				+2.0
3,050,824	+				+0.9
3,050,824	+				-0.2
3,050,825	-				+1.2
3,050,825	-				-0.9
3,050,825	-				+1.9
3,050,825	-				-1.7
3,050,826	+				+0.1
3,050,826	+				-0.7
3,050,826	+				+0.3
3,050,826	+				-0.7
3,050,826	+				-0.7
3,050,826	+				+0.5
3,050,826	+				-2.0
3,050,827	-				-0.3
3,050,827	-				-1.4
3,050,827	-				-0.7
3,050,827	-				-2.1
3,050,827	-				-3.6
3,050,982	+		IAI47_14440	0.24	+0.7
3,050,982	+		IAI47_14440	0.24	-1.0
3,050,982	+		IAI47_14440	0.24	+0.1
3,050,983	-		IAI47_14440	0.24	-0.4
3,050,983	-		IAI47_14440	0.24	+2.4
3,050,983	-		IAI47_14440	0.24	+0.7
3,051,033	+		IAI47_14440	0.29	-1.2
3,051,033	+		IAI47_14440	0.29	+0.3
3,051,033	+		IAI47_14440	0.29	-1.0
3,051,033	+		IAI47_14440	0.29	-0.7
3,051,034	-		IAI47_14440	0.29	+0.9
3,051,034	-		IAI47_14440	0.29	+0.7
3,051,034	-		IAI47_14440	0.29	+0.3
3,051,034	-		IAI47_14440	0.29	-0.5
3,051,061	+		IAI47_14440	0.32	+1.7
3,051,062	-		IAI47_14440	0.32	-0.7
3,051,062	-		IAI47_14440	0.32	+0.3
3,051,147	-		IAI47_14440	0.41	-0.2
3,051,215	-		IAI47_14440	0.48	+1.0
3,051,215	-		IAI47_14440	0.48	-2.3
3,051,216	+		IAI47_14440	0.48	+0.3
3,051,216	+		IAI47_14440	0.48	+0.1
3,051,216	+		IAI47_14440	0.48	-0.5
3,051,217	-		IAI47_14440	0.48	-0.1
3,051,234	+		IAI47_14440	0.50	+0.6
3,051,234	+		IAI47_14440	0.50	-1.4
3,051,270	+		IAI47_14440	0.54	-0.2
3,051,270	+		IAI47_14440	0.54	+0.4
3,051,271	-		IAI47_14440	0.54	+0.0
3,051,271	-		IAI47_14440	0.54	-0.5
3,051,382	+		IAI47_14440	0.65	+0.6
3,051,383	-		IAI47_14440	0.65	+0.3
3,051,383	-		IAI47_14440	0.65	-1.6
3,051,414	+		IAI47_14440	0.69	+1.5
3,051,414	+		IAI47_14440	0.69	+0.6
3,051,414	+		IAI47_14440	0.69	-1.1
3,051,414	+		IAI47_14440	0.69	-1.1
3,051,414	+		IAI47_14440	0.69	+3.2
3,051,414	+		IAI47_14440	0.69	-1.6
3,051,414	+		IAI47_14440	0.69	-0.5
3,051,414	+		IAI47_14440	0.69	-1.7
3,051,415	-		IAI47_14440	0.69	+0.1
3,051,415	-		IAI47_14440	0.69	-1.6
3,051,415	-		IAI47_14440	0.69	+0.1
3,051,415	-		IAI47_14440	0.69	+2.0
3,051,415	-		IAI47_14440	0.69	+1.5
3,051,415	-		IAI47_14440	0.69	-0.3
3,051,415	-		IAI47_14440	0.69	+0.7
3,051,415	-		IAI47_14440	0.69	+2.1
3,051,439	+		IAI47_14440	0.71	+0.3
3,051,439	+		IAI47_14440	0.71	+0.6
3,051,440	-		IAI47_14440	0.71	+0.4
3,051,440	-		IAI47_14440	0.71	+0.4
3,051,440	-		IAI47_14440	0.71	+1.2
3,051,440	-		IAI47_14440	0.71	-2.1
3,051,481	-		IAI47_14440	0.76	+1.3
3,051,481	-		IAI47_14440	0.76	+0.4
3,051,488	+		IAI47_14440	0.76	+2.1
3,051,522	+		IAI47_14440	0.80	+2.5
3,051,522	+		IAI47_14440	0.80	-0.3
3,051,530	-		IAI47_14440	0.81	+1.0
3,051,530	-		IAI47_14440	0.81	-0.6
3,051,636	+				-2.4
3,051,643	+				-0.4
3,051,644	-				-2.0
3,051,644	-				+0.4
3,051,673	+				+0.5
3,051,678	-				-0.9
3,051,678	-				+0.8
3,051,678	-				-1.8
3,051,690	-				-0.0
3,051,703	+				+1.5
3,051,703	+				-1.3
3,051,703	+				+1.3
3,051,703	+				+1.1
3,051,704	-				-0.3
3,051,704	-				+2.2
3,051,771	+				-0.3
3,051,771	+				-0.6
3,051,781	+				+0.8
3,051,791	+				+1.4
3,051,810	-				-1.0
3,051,810	-				-0.6
3,051,810	-				-1.3
3,051,813	-				+2.5
3,051,844	-				+1.6
3,051,844	-				-0.0
3,052,638	+				+1.1
3,052,639	-				-0.1
3,052,689	+		IAI47_14450	0.12	-0.3
3,052,689	+		IAI47_14450	0.12	-0.9
3,052,689	+		IAI47_14450	0.12	-0.5
3,052,690	-		IAI47_14450	0.13	+0.4
3,052,690	-		IAI47_14450	0.13	+0.8
3,052,690	-		IAI47_14450	0.13	+0.5
3,052,690	-		IAI47_14450	0.13	+1.1