Strain Fitness in Pantoea sp. MT58 around IAI47_14430

Experiment: Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
3,046,497	-		IAI47_14425	0.76	-0.2
3,046,542	+		IAI47_14425	0.79	-1.2
3,046,543	-		IAI47_14425	0.79	-0.3
3,046,543	-		IAI47_14425	0.79	+1.1
3,046,598	+		IAI47_14425	0.82	+0.9
3,046,721	+		IAI47_14425	0.89	-0.1
3,046,722	-		IAI47_14425	0.89	+1.2
3,046,731	+		IAI47_14425	0.89	-2.0
3,046,731	+		IAI47_14425	0.89	+0.9
3,046,732	-		IAI47_14425	0.89	-2.7
3,046,732	-		IAI47_14425	0.89	+0.7
3,046,732	-		IAI47_14425	0.89	+1.6
3,046,763	+				+0.3
3,046,763	+				-0.2
3,046,779	+				-0.3
3,046,780	-				-0.0
3,046,829	+				-2.0
3,046,830	-				-1.2
3,046,908	+				+1.3
3,046,908	+				-0.2
3,046,908	+				+1.0
3,046,909	-				-0.9
3,046,909	-				-0.7
3,046,909	-				+1.4
3,046,912	+				-0.2
3,046,912	+				-0.3
3,046,912	+				-0.4
3,046,913	-				-0.2
3,046,913	-				+0.7
3,046,933	+				-1.5
3,046,934	-				+0.7
3,046,934	-				-1.7
3,046,934	-				+0.7
3,046,938	+				+0.6
3,046,938	+				+0.2
3,046,939	-				+1.1
3,047,044	+				+1.9
3,047,045	-				+0.5
3,047,045	-				+0.9
3,047,093	-				-0.1
3,047,110	+				+0.9
3,047,111	-				+0.2
3,047,149	+				+1.5
3,047,149	+				+1.0
3,047,149	+				+0.1
3,047,150	-				+0.6
3,047,150	-				+1.6
3,047,150	-				+0.1
3,047,158	+				-0.6
3,047,159	-				+0.1
3,047,159	-				+1.3
3,047,165	+				+0.5
3,047,165	+				-0.3
3,047,166	-				+1.3
3,047,166	-				+0.4
3,047,215	+				-0.8
3,047,216	-				-0.0
3,047,236	+				+0.7
3,047,236	+				+1.3
3,047,236	+				+0.5
3,047,236	+				+1.8
3,047,236	+				-1.8
3,047,237	-				+0.1
3,047,237	-				+2.9
3,047,267	+				-1.8
3,047,267	+				-1.3
3,047,268	-				-0.8
3,047,268	-				+0.5
3,047,280	-				+1.4
3,047,283	+				-1.8
3,047,284	-				-0.9
3,047,284	-				-0.2
3,047,323	-				-1.1
3,047,338	+				-0.9
3,047,358	+				-0.8
3,047,415	+				+0.4
3,047,418	+				-1.0
3,047,419	-				-0.1
3,047,461	+				+0.3
3,047,462	-				-0.2
3,047,462	-				-2.3
3,047,462	-				+1.1
3,047,590	+				-1.8
3,047,591	-				-1.9
3,047,591	-				-2.1
3,047,591	-				+0.9
3,047,591	-				-1.1
3,047,591	-				-1.2
3,047,637	-				-1.0
3,047,637	-				-0.7
3,047,637	-				-0.1
3,047,637	-				-1.1
3,047,728	+		IAI47_14430	0.15	+0.9
3,047,728	+		IAI47_14430	0.15	+3.3
3,047,779	+		IAI47_14430	0.18	+0.2
3,047,794	+		IAI47_14430	0.19	-0.5
3,047,795	-		IAI47_14430	0.19	-0.1
3,047,852	+		IAI47_14430	0.22	-1.4
3,047,861	+		IAI47_14430	0.23	+1.2
3,047,862	-		IAI47_14430	0.23	-2.1
3,047,872	+		IAI47_14430	0.23	+1.1
3,047,873	-		IAI47_14430	0.23	+0.1
3,047,873	-		IAI47_14430	0.23	-1.4
3,047,924	-		IAI47_14430	0.26	-0.5
3,047,924	-		IAI47_14430	0.26	-1.3
3,047,924	-		IAI47_14430	0.26	-1.3
3,047,924	-		IAI47_14430	0.26	-0.1
3,047,962	+		IAI47_14430	0.29	+0.1
3,047,962	+		IAI47_14430	0.29	-0.9
3,047,962	+		IAI47_14430	0.29	+1.5
3,047,963	-		IAI47_14430	0.29	-1.7
3,047,963	-		IAI47_14430	0.29	+1.9
3,048,074	+		IAI47_14430	0.35	-2.9
3,048,075	-		IAI47_14430	0.35	+1.8
3,048,158	+		IAI47_14430	0.40	-0.3
3,048,158	+		IAI47_14430	0.40	-3.0
3,048,159	-		IAI47_14430	0.40	+0.7
3,048,159	-		IAI47_14430	0.40	-1.1
3,048,172	+		IAI47_14430	0.41	+0.9
3,048,173	-		IAI47_14430	0.41	+1.1
3,048,173	-		IAI47_14430	0.41	-1.9
3,048,251	+		IAI47_14430	0.46	+1.6
3,048,297	-		IAI47_14430	0.48	+0.7
3,048,325	+		IAI47_14430	0.50	+1.5
3,048,411	-		IAI47_14430	0.55	+1.6
3,048,411	-		IAI47_14430	0.55	+0.8
3,048,411	-		IAI47_14430	0.55	-1.6
3,048,422	+		IAI47_14430	0.56	+1.9
3,048,422	+		IAI47_14430	0.56	+1.1
3,048,423	-		IAI47_14430	0.56	-0.6
3,048,423	-		IAI47_14430	0.56	-2.0
3,048,423	-		IAI47_14430	0.56	-0.5
3,048,473	+		IAI47_14430	0.59	+0.1
3,048,473	+		IAI47_14430	0.59	-1.4
3,048,474	-		IAI47_14430	0.59	+2.7
3,048,525	-		IAI47_14430	0.62	+1.7
3,048,542	+		IAI47_14430	0.63	+1.1
3,048,543	-		IAI47_14430	0.63	-0.9
3,048,543	-		IAI47_14430	0.63	+0.3
3,048,543	-		IAI47_14430	0.63	+0.9
3,048,608	+		IAI47_14430	0.67	-0.9
3,048,609	-		IAI47_14430	0.67	+0.7
3,048,629	+		IAI47_14430	0.68	+2.1
3,048,901	-		IAI47_14430	0.84	+0.1
3,048,954	+		IAI47_14430	0.87	-1.3
3,048,954	+		IAI47_14430	0.87	-0.4
3,048,954	+		IAI47_14430	0.87	-1.1
3,048,955	-		IAI47_14430	0.87	+1.1
3,048,955	-		IAI47_14430	0.87	-0.5
3,048,955	-		IAI47_14430	0.87	+1.7
3,049,002	-		IAI47_14430	0.90	-1.0
3,049,026	+				-0.6
3,049,026	+				-0.7
3,049,044	+				-2.4
3,049,044	+				+0.7
3,049,044	+				+3.1
3,049,044	+				+0.3
3,049,044	+				+0.5
3,049,044	+				+2.0
3,049,044	+				-0.3
3,049,045	-				+0.0
3,049,103	+				+1.1
3,049,103	+				+0.1
3,049,103	+				+2.3
3,049,103	+				+0.3
3,049,103	+				-0.1
3,049,103	+				-0.1
3,049,104	-				+1.5
3,049,104	-				+1.7
3,049,104	-				+1.7
3,049,104	-				+0.5
3,049,104	-				-0.9
3,049,147	+				-1.6
3,049,148	-				-0.0
3,049,162	+				+0.0
3,049,163	-				+1.5
3,049,163	-				-1.2
3,049,163	-				+1.1
3,049,163	-				+0.7
3,049,163	-				+0.4
3,049,163	-				-0.0
3,049,174	+				+0.9
3,049,189	+				-0.3
3,049,189	+				+0.2
3,049,189	+				-0.1
3,049,189	+				+0.3
3,049,189	+				+3.5
3,049,189	+				-0.1
3,049,189	+				-0.0
3,049,189	+				-0.3
3,049,189	+				-0.3
3,049,189	+				+0.1
3,049,190	-				+4.6
3,049,190	-				+1.5
3,049,190	-				+0.4
3,049,190	-				+0.0
3,049,190	-				+1.8
3,049,190	-				+0.6
3,049,190	-				-1.5
3,049,190	-				-1.3
3,049,190	-				+0.9
3,049,190	-				-0.1
3,049,327	+				-1.0
3,049,327	+				-0.6
3,049,328	-				-0.3
3,049,328	-				-0.9
3,049,328	-				+0.3
3,049,357	+				-0.9
3,049,358	-				+0.6
3,049,358	-				-0.9
3,049,409	+				-0.5
3,049,409	+				+0.3
3,049,409	+				-0.5
3,049,484	+				-0.9
3,049,484	+				-0.3
3,049,484	+				+0.1
3,049,485	-				+0.6
3,049,485	-				+1.9
3,049,485	-				-0.3
3,049,502	+				+0.0
3,049,502	+				-1.2
3,049,503	-				+1.2
3,049,503	-				+0.7
3,049,506	+				+0.5
3,049,506	+				+0.3
3,049,506	+				+0.4
3,049,506	+				-0.9
3,049,506	+				-0.1
3,049,506	+				-1.0
3,049,507	-				-1.4
3,049,507	-				-0.9
3,049,507	-				-0.2
3,049,507	-				-0.8
3,049,507	-				-1.2
3,049,507	-				+0.6
3,049,507	-				-2.8
3,049,507	-				-0.2
3,049,507	-				-0.5
3,049,507	-				+0.3
3,049,507	-				+0.3
3,049,530	-		IAI47_14435	0.10	-0.2
3,049,530	-		IAI47_14435	0.10	-2.2
3,049,530	-		IAI47_14435	0.10	+0.4
3,049,530	-		IAI47_14435	0.10	-0.3
3,049,530	-		IAI47_14435	0.10	+1.7
3,049,530	-		IAI47_14435	0.10	+2.5
3,049,538	+		IAI47_14435	0.11	-0.1
3,049,563	+		IAI47_14435	0.13	+0.1
3,049,563	+		IAI47_14435	0.13	+1.7
3,049,564	-		IAI47_14435	0.13	-1.7
3,049,564	-		IAI47_14435	0.13	-0.1
3,049,583	+		IAI47_14435	0.14	+1.2
3,049,583	+		IAI47_14435	0.14	-0.2
3,049,583	+		IAI47_14435	0.14	+0.1
3,049,583	+		IAI47_14435	0.14	-1.2
3,049,584	-		IAI47_14435	0.14	-0.7
3,049,584	-		IAI47_14435	0.14	+1.8
3,049,584	-		IAI47_14435	0.14	-0.1
3,049,584	-		IAI47_14435	0.14	-2.2
3,049,587	+		IAI47_14435	0.15	+1.7
3,049,587	+		IAI47_14435	0.15	-0.5
3,049,587	+		IAI47_14435	0.15	-1.1
3,049,587	+		IAI47_14435	0.15	-0.2
3,049,588	-		IAI47_14435	0.15	-0.7
3,049,588	-		IAI47_14435	0.15	+0.1
3,049,588	-		IAI47_14435	0.15	-1.2
3,049,588	-		IAI47_14435	0.15	+0.1
3,049,610	-		IAI47_14435	0.16	+0.0
3,049,671	+		IAI47_14435	0.21	-0.3
3,049,671	+		IAI47_14435	0.21	-1.7
3,049,671	+		IAI47_14435	0.21	+2.2
3,049,671	+		IAI47_14435	0.21	-1.6
3,049,672	-		IAI47_14435	0.21	-1.4
3,049,672	-		IAI47_14435	0.21	+0.4
3,049,672	-		IAI47_14435	0.21	+0.7
3,049,672	-		IAI47_14435	0.21	-0.7
3,049,672	-		IAI47_14435	0.21	-0.7
3,049,672	-		IAI47_14435	0.21	+0.6
3,049,672	-		IAI47_14435	0.21	-0.9
3,049,672	-		IAI47_14435	0.21	+0.0
3,049,672	-		IAI47_14435	0.21	+0.3
3,049,672	-		IAI47_14435	0.21	+1.6
3,049,673	+		IAI47_14435	0.21	-0.1
3,049,673	+		IAI47_14435	0.21	-1.1
3,049,673	+		IAI47_14435	0.21	-0.5
3,049,673	+		IAI47_14435	0.21	+0.3
3,049,673	+		IAI47_14435	0.21	-0.8
3,049,673	+		IAI47_14435	0.21	-0.2
3,049,673	+		IAI47_14435	0.21	-0.6
3,049,674	-		IAI47_14435	0.21	-0.1
3,049,674	-		IAI47_14435	0.21	+0.6
3,049,674	-		IAI47_14435	0.21	-0.2
3,049,674	-		IAI47_14435	0.21	-0.3
3,049,674	-		IAI47_14435	0.21	-0.7
3,049,674	-		IAI47_14435	0.21	-2.2
3,049,674	-		IAI47_14435	0.21	+0.6
3,049,729	+		IAI47_14435	0.26	-0.6
3,049,745	+		IAI47_14435	0.27	+0.3
3,049,745	+		IAI47_14435	0.27	+0.5
3,049,794	+		IAI47_14435	0.31	-0.4
3,049,794	+		IAI47_14435	0.31	-2.7
3,049,795	-		IAI47_14435	0.31	+0.6
3,049,817	+		IAI47_14435	0.32	+0.3
3,049,829	+		IAI47_14435	0.33	-0.8
3,049,829	+		IAI47_14435	0.33	+0.9
3,049,829	+		IAI47_14435	0.33	-1.3
3,049,829	+		IAI47_14435	0.33	-0.2
3,049,829	+		IAI47_14435	0.33	-0.5
3,049,830	-		IAI47_14435	0.33	-0.1
3,049,830	-		IAI47_14435	0.33	+0.3
3,049,830	-		IAI47_14435	0.33	-2.0
3,049,830	-		IAI47_14435	0.33	-1.4
3,049,884	+		IAI47_14435	0.37	+1.3
3,049,884	+		IAI47_14435	0.37	+0.8
3,049,885	-		IAI47_14435	0.38	-1.1
3,049,885	-		IAI47_14435	0.38	-0.1
3,049,885	-		IAI47_14435	0.38	+0.3
3,049,885	-		IAI47_14435	0.38	+0.1
3,049,939	+		IAI47_14435	0.42	-0.6
3,049,995	+		IAI47_14435	0.46	-0.9
3,050,057	+		IAI47_14435	0.51	+0.1
3,050,057	+		IAI47_14435	0.51	+0.1
3,050,058	-		IAI47_14435	0.51	-0.5
3,050,058	-		IAI47_14435	0.51	+0.7
3,050,058	-		IAI47_14435	0.51	-0.4
3,050,117	+		IAI47_14435	0.55	+1.2
3,050,117	+		IAI47_14435	0.55	-0.2
3,050,117	+		IAI47_14435	0.55	+2.7
3,050,118	-		IAI47_14435	0.55	-2.0
3,050,118	-		IAI47_14435	0.55	-0.5
3,050,118	-		IAI47_14435	0.55	+0.8
3,050,118	-		IAI47_14435	0.55	-0.1
3,050,129	-		IAI47_14435	0.56	-1.3
3,050,129	-		IAI47_14435	0.56	+1.3
3,050,129	-		IAI47_14435	0.56	-0.2