Strain Fitness in Pantoea sp. MT58 around IAI47_13440

Experiment: Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
2,852,618	-		IAI47_13435	0.47	+2.0
2,852,618	-		IAI47_13435	0.47	-0.3
2,852,662	+		IAI47_13435	0.50	-0.1
2,852,662	+		IAI47_13435	0.50	+0.6
2,852,662	+		IAI47_13435	0.50	-0.6
2,852,662	+		IAI47_13435	0.50	-0.9
2,852,663	-		IAI47_13435	0.50	-0.6
2,852,663	-		IAI47_13435	0.50	-1.1
2,852,663	-		IAI47_13435	0.50	-1.0
2,852,838	+		IAI47_13435	0.63	+0.3
2,852,839	+		IAI47_13435	0.63	-1.7
2,852,840	-		IAI47_13435	0.63	-1.7
2,852,840	-		IAI47_13435	0.63	-1.0
2,852,848	+		IAI47_13435	0.64	+2.5
2,852,963	+		IAI47_13435	0.72	-1.9
2,852,963	+		IAI47_13435	0.72	+1.7
2,852,963	+		IAI47_13435	0.72	+1.3
2,852,963	+		IAI47_13435	0.72	-1.4
2,852,963	+		IAI47_13435	0.72	-0.7
2,852,963	+		IAI47_13435	0.72	+2.3
2,852,964	-		IAI47_13435	0.72	+1.6
2,852,964	-		IAI47_13435	0.72	+3.4
2,852,964	-		IAI47_13435	0.72	+0.1
2,852,964	-		IAI47_13435	0.72	-1.1
2,852,965	+		IAI47_13435	0.72	-2.3
2,852,965	+		IAI47_13435	0.72	-1.7
2,852,965	+		IAI47_13435	0.72	+0.2
2,852,965	+		IAI47_13435	0.72	-0.3
2,852,965	+		IAI47_13435	0.72	-1.9
2,852,966	-		IAI47_13435	0.72	+1.1
2,852,966	-		IAI47_13435	0.72	-1.9
2,852,966	-		IAI47_13435	0.72	+0.5
2,852,966	-		IAI47_13435	0.72	+0.7
2,852,966	-		IAI47_13435	0.72	+0.3
2,852,966	-		IAI47_13435	0.72	-0.2
2,852,966	-		IAI47_13435	0.72	-0.5
2,853,045	+		IAI47_13435	0.78	+0.3
2,853,045	+		IAI47_13435	0.78	-0.6
2,853,046	-		IAI47_13435	0.78	+1.2
2,853,046	-		IAI47_13435	0.78	+0.6
2,853,054	+		IAI47_13435	0.79	-0.0
2,853,054	+		IAI47_13435	0.79	-2.1
2,853,054	+		IAI47_13435	0.79	+0.9
2,853,055	-		IAI47_13435	0.79	-0.5
2,853,167	+		IAI47_13435	0.87	+1.1
2,853,176	+		IAI47_13435	0.88	-1.1
2,853,181	+		IAI47_13435	0.88	-2.9
2,853,181	+		IAI47_13435	0.88	-0.3
2,853,182	-		IAI47_13435	0.88	-2.4
2,853,268	+				-0.3
2,853,269	-				+0.4
2,853,269	-				+1.2
2,853,274	+				+2.0
2,853,274	+				+2.5
2,853,274	+				+1.8
2,853,274	+				-1.9
2,853,274	+				+0.9
2,853,275	-				+0.3
2,853,275	-				-0.4
2,853,275	-				-0.3
2,853,275	-				+0.1
2,853,285	+				+0.4
2,853,285	+				+1.5
2,853,285	+				-0.2
2,853,313	+				-0.7
2,853,314	-				-1.1
2,853,347	+				+1.1
2,853,347	+				-0.3
2,853,347	+				-0.1
2,853,347	+				-0.3
2,853,347	+				-0.5
2,853,347	+				-1.0
2,853,347	+				+0.7
2,853,348	-				+0.5
2,853,348	-				+0.9
2,853,348	-				-0.7
2,853,348	-				-0.4
2,853,348	-				+0.0
2,853,389	+				-0.8
2,853,390	-				-0.9
2,853,404	+				-0.2
2,853,405	-				+0.8
2,853,446	+				-2.2
2,853,446	+				-0.1
2,853,446	+				-0.5
2,853,446	+				+1.8
2,853,447	-				+1.3
2,853,447	-				-0.4
2,853,447	-				+0.7
2,853,447	-				-0.5
2,853,447	-				-0.3
2,853,455	+				-1.3
2,853,456	-				-0.4
2,853,456	-				-2.0
2,853,456	-				+0.1
2,853,469	+				-0.6
2,853,470	-				-1.2
2,853,470	-				-1.7
2,853,470	-				+2.5
2,853,478	+				-1.3
2,853,478	+				+0.3
2,853,479	-				+0.7
2,853,480	+				+0.3
2,853,481	-				-1.0
2,853,481	-				-0.1
2,853,496	+				-2.0
2,853,497	-				-0.0
2,853,507	+				-1.4
2,853,520	+				+0.9
2,853,520	+				+1.5
2,853,520	+				-0.3
2,853,520	+				+1.4
2,853,520	+				+0.1
2,853,521	-				-0.9
2,853,521	-				+0.3
2,853,565	+				+0.0
2,853,565	+				+0.0
2,853,566	-				-1.0
2,853,566	-				+1.7
2,853,569	+				-1.1
2,853,569	+				-2.1
2,853,569	+				-1.2
2,853,570	-				-0.7
2,853,570	-				+0.9
2,853,570	-				-1.1
2,853,570	-				-0.0
2,853,570	-				+1.4
2,853,570	-				-0.5
2,853,570	-				-1.1
2,853,677	-		IAI47_13440	0.29	-1.4
2,853,721	+		IAI47_13440	0.40	+1.8
2,853,722	-		IAI47_13440	0.40	-0.0
2,853,722	-		IAI47_13440	0.40	-1.1
2,853,724	+		IAI47_13440	0.41	-1.1
2,853,725	-		IAI47_13440	0.41	-1.4
2,853,725	-		IAI47_13440	0.41	-0.1
2,853,725	-		IAI47_13440	0.41	+0.2
2,853,725	-		IAI47_13440	0.41	-0.9
2,853,725	-		IAI47_13440	0.41	+1.9
2,853,725	-		IAI47_13440	0.41	-1.1
2,853,761	+		IAI47_13440	0.50	-0.0
2,853,761	+		IAI47_13440	0.50	+0.7
2,853,761	+		IAI47_13440	0.50	-1.4
2,853,762	-		IAI47_13440	0.50	-0.9
2,853,762	-		IAI47_13440	0.50	+0.7
2,853,762	-		IAI47_13440	0.50	+0.9
2,853,765	+		IAI47_13440	0.51	-0.4
2,853,766	-		IAI47_13440	0.51	-0.7
2,853,766	-		IAI47_13440	0.51	-0.1
2,853,766	-		IAI47_13440	0.51	-1.6
2,853,766	-		IAI47_13440	0.51	+0.9
2,853,814	+		IAI47_13440	0.64	+1.4
2,853,814	+		IAI47_13440	0.64	-0.8
2,853,814	+		IAI47_13440	0.64	-1.7
2,853,814	+		IAI47_13440	0.64	-0.4
2,853,814	+		IAI47_13440	0.64	-1.9
2,853,814	+		IAI47_13440	0.64	+0.1
2,853,814	+		IAI47_13440	0.64	+0.7
2,853,814	+		IAI47_13440	0.64	-0.1
2,853,814	+		IAI47_13440	0.64	-1.4
2,853,815	-		IAI47_13440	0.64	+0.0
2,853,815	-		IAI47_13440	0.64	-1.3
2,853,815	-		IAI47_13440	0.64	-0.7
2,853,815	-		IAI47_13440	0.64	-3.2
2,853,815	-		IAI47_13440	0.64	+0.8
2,853,815	-		IAI47_13440	0.64	+0.5
2,853,815	-		IAI47_13440	0.64	+0.6
2,853,815	-		IAI47_13440	0.64	+0.1
2,853,815	-		IAI47_13440	0.64	-0.7
2,853,830	+		IAI47_13440	0.68	-0.5
2,853,830	+		IAI47_13440	0.68	+0.5
2,853,831	-		IAI47_13440	0.68	-0.9
2,853,891	+		IAI47_13440	0.83	+0.1
2,853,891	+		IAI47_13440	0.83	-1.8
2,853,891	+		IAI47_13440	0.83	-0.9
2,853,891	+		IAI47_13440	0.83	-1.0
2,853,892	-		IAI47_13440	0.83	+0.6
2,853,892	-		IAI47_13440	0.83	+0.5
2,853,892	-		IAI47_13440	0.83	-1.6
2,853,899	+		IAI47_13440	0.85	+0.2
2,853,899	+		IAI47_13440	0.85	-1.2
2,853,900	-		IAI47_13440	0.85	-0.9
2,853,905	+		IAI47_13440	0.87	-0.9
2,853,905	+		IAI47_13440	0.87	+0.8
2,853,905	+		IAI47_13440	0.87	-0.9
2,853,905	+		IAI47_13440	0.87	-0.2
2,853,906	-		IAI47_13440	0.87	-0.7
2,853,906	-		IAI47_13440	0.87	-0.9
2,853,913	-		IAI47_13440	0.89	-0.3
2,853,913	-		IAI47_13440	0.89	+1.5
2,853,938	+				+1.3
2,853,945	-				+1.8
2,853,945	-				+1.8
2,854,028	+				+0.1
2,854,053	-				-0.2
2,854,053	-				+0.4
2,854,056	+				+0.5
2,854,056	+				+0.9
2,854,056	+				+0.5
2,854,057	-				-0.4
2,854,057	-				+0.9
2,854,057	-				+0.1
2,854,057	-				+1.9
2,854,057	-				-1.0
2,854,057	-				+0.1
2,854,093	-				+0.0
2,854,135	+				+0.5
2,854,164	+				-0.3
2,854,184	-				+0.3
2,854,184	-				+0.0
2,854,184	-				-0.4
2,854,184	-				+0.8
2,854,184	-				-1.8
2,854,234	-		IAI47_13445	0.13	+0.4
2,854,285	-		IAI47_13445	0.20	+0.0
2,854,285	-		IAI47_13445	0.20	-0.6
2,854,285	-		IAI47_13445	0.20	-0.0
2,854,285	-		IAI47_13445	0.20	+0.1
2,854,299	+		IAI47_13445	0.21	-0.7
2,854,300	+		IAI47_13445	0.22	+0.5
2,854,301	-		IAI47_13445	0.22	-0.4
2,854,312	+		IAI47_13445	0.23	-0.2
2,854,312	+		IAI47_13445	0.23	-0.9
2,854,312	+		IAI47_13445	0.23	-2.2
2,854,313	-		IAI47_13445	0.23	+0.0
2,854,344	-		IAI47_13445	0.27	-1.0
2,854,344	-		IAI47_13445	0.27	-1.3
2,854,344	-		IAI47_13445	0.27	+0.3
2,854,365	+		IAI47_13445	0.30	+0.7
2,854,365	+		IAI47_13445	0.30	+0.6
2,854,366	-		IAI47_13445	0.30	+3.5
2,854,366	-		IAI47_13445	0.30	-0.6
2,854,366	-		IAI47_13445	0.30	-1.0
2,854,400	+		IAI47_13445	0.35	+2.0
2,854,455	-		IAI47_13445	0.42	-1.3
2,854,468	+		IAI47_13445	0.44	+0.9
2,854,557	+		IAI47_13445	0.55	+0.7
2,854,557	+		IAI47_13445	0.55	-0.2
2,854,557	+		IAI47_13445	0.55	+0.6
2,854,557	+		IAI47_13445	0.55	+0.5
2,854,558	-		IAI47_13445	0.55	-0.1
2,854,558	-		IAI47_13445	0.55	+0.0
2,854,558	-		IAI47_13445	0.55	+0.1
2,854,558	-		IAI47_13445	0.55	-0.8
2,854,558	-		IAI47_13445	0.55	+0.1
2,854,558	-		IAI47_13445	0.55	-0.9
2,854,558	-		IAI47_13445	0.55	-0.1
2,854,558	-		IAI47_13445	0.55	-0.3
2,854,605	+		IAI47_13445	0.62	-0.6
2,854,685	-		IAI47_13445	0.72	+0.9
2,854,685	-		IAI47_13445	0.72	-1.2
2,854,722	+		IAI47_13445	0.77	-0.1
2,854,722	+		IAI47_13445	0.77	+2.0
2,854,722	+		IAI47_13445	0.77	-1.2
2,854,723	-		IAI47_13445	0.77	-0.9
2,854,723	-		IAI47_13445	0.77	+0.3
2,854,796	+		IAI47_13445	0.87	-2.2
2,854,796	+		IAI47_13445	0.87	-2.5
2,854,796	+		IAI47_13445	0.87	+0.3
2,854,796	+		IAI47_13445	0.87	+0.7
2,854,796	+		IAI47_13445	0.87	-0.7
2,854,796	+		IAI47_13445	0.87	-1.3
2,854,796	+		IAI47_13445	0.87	-0.3
2,854,797	-		IAI47_13445	0.87	-0.0
2,854,797	-		IAI47_13445	0.87	+0.7
2,854,797	-		IAI47_13445	0.87	-2.7
2,854,797	-		IAI47_13445	0.87	+0.0
2,854,797	-		IAI47_13445	0.87	+1.2
2,854,797	-		IAI47_13445	0.87	+0.3
2,854,797	-		IAI47_13445	0.87	-1.1
2,854,840	+				+3.2
2,854,840	+				+0.1
2,854,840	+				-0.2
2,854,841	-				-0.7
2,854,893	+				-1.1
2,854,894	-				+0.7
2,854,903	-				+0.0