Strain Fitness in Pantoea sp. MT58 around IAI47_13200

Experiment: Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
2,791,619	+				+0.2
2,791,636	-				+3.1
2,791,641	-				-1.0
2,791,677	+				+1.9
2,791,678	-				-1.3
2,791,678	-				+0.4
2,791,678	-				-1.6
2,791,678	-				-1.9
2,791,678	-				+0.4
2,791,693	+				-1.9
2,791,694	-				-0.3
2,791,694	-				-2.0
2,791,694	-				+0.0
2,791,694	-				-1.0
2,791,694	-				+0.2
2,791,702	+				+1.2
2,791,709	-				+0.0
2,791,709	-				-2.2
2,791,741	+				-1.4
2,791,741	+				+1.0
2,791,742	-				-0.9
2,791,742	-				-1.2
2,791,743	+				-1.8
2,791,743	+				-0.8
2,791,743	+				-1.6
2,791,743	+				-1.8
2,791,743	+				+0.6
2,791,743	+				+0.1
2,791,743	+				-0.4
2,791,743	+				-3.3
2,791,743	+				-1.2
2,791,744	-				-0.6
2,791,744	-				-0.6
2,791,744	-				+0.4
2,791,744	-				+0.4
2,791,744	-				-1.6
2,791,744	-				-1.6
2,791,744	-				+0.1
2,791,747	+				+2.1
2,791,747	+				-1.4
2,791,748	-				+0.4
2,791,762	+				+1.8
2,791,798	+				-1.3
2,791,838	+				-1.8
2,791,838	+				-0.1
2,791,838	+				+0.8
2,791,838	+				-1.3
2,791,838	+				-0.9
2,791,838	+				-1.3
2,791,839	-				-0.0
2,791,839	-				-0.9
2,791,841	-				-1.6
2,791,847	-		IAI47_13195	0.11	-0.1
2,791,902	+		IAI47_13195	0.22	+0.3
2,791,903	-		IAI47_13195	0.22	+0.9
2,791,912	+		IAI47_13195	0.24	-1.5
2,791,913	-		IAI47_13195	0.24	+0.3
2,791,913	-		IAI47_13195	0.24	-1.0
2,791,930	+		IAI47_13195	0.27	-0.6
2,791,930	+		IAI47_13195	0.27	-0.6
2,791,931	-		IAI47_13195	0.27	-0.9
2,791,931	-		IAI47_13195	0.27	+0.4
2,791,931	-		IAI47_13195	0.27	-0.5
2,791,933	+		IAI47_13195	0.28	+1.4
2,791,933	+		IAI47_13195	0.28	-1.0
2,791,933	+		IAI47_13195	0.28	-0.5
2,791,934	-		IAI47_13195	0.28	-0.8
2,791,934	-		IAI47_13195	0.28	-2.2
2,791,934	-		IAI47_13195	0.28	+0.2
2,791,934	-		IAI47_13195	0.28	-1.6
2,791,963	+		IAI47_13195	0.34	-2.1
2,791,963	+		IAI47_13195	0.34	-2.3
2,791,963	+		IAI47_13195	0.34	-1.6
2,791,963	+		IAI47_13195	0.34	-0.4
2,791,963	+		IAI47_13195	0.34	-0.8
2,791,964	-		IAI47_13195	0.34	-2.0
2,791,964	-		IAI47_13195	0.34	-0.4
2,791,977	+		IAI47_13195	0.37	-1.0
2,791,977	+		IAI47_13195	0.37	+0.2
2,791,978	-		IAI47_13195	0.37	+0.9
2,791,978	-		IAI47_13195	0.37	-0.3
2,791,978	-		IAI47_13195	0.37	+0.3
2,792,046	+		IAI47_13195	0.50	-0.4
2,792,047	-		IAI47_13195	0.50	+2.0
2,792,047	-		IAI47_13195	0.50	-0.7
2,792,047	-		IAI47_13195	0.50	+0.4
2,792,092	+		IAI47_13195	0.59	-1.6
2,792,093	-		IAI47_13195	0.60	+1.0
2,792,122	+		IAI47_13195	0.65	-1.3
2,792,122	+		IAI47_13195	0.65	-1.4
2,792,123	-		IAI47_13195	0.65	-0.7
2,792,165	+		IAI47_13195	0.74	-1.3
2,792,166	-		IAI47_13195	0.74	-0.6
2,792,167	+		IAI47_13195	0.74	-1.4
2,792,167	+		IAI47_13195	0.74	-0.5
2,792,167	+		IAI47_13195	0.74	-1.0
2,792,167	+		IAI47_13195	0.74	-0.4
2,792,167	+		IAI47_13195	0.74	-0.4
2,792,168	-		IAI47_13195	0.74	-0.5
2,792,168	-		IAI47_13195	0.74	-2.3
2,792,180	-		IAI47_13195	0.77	-0.8
2,792,180	-		IAI47_13195	0.77	-0.9
2,792,191	+		IAI47_13195	0.79	-1.4
2,792,192	-		IAI47_13195	0.79	-0.7
2,792,192	-		IAI47_13195	0.79	-1.0
2,792,200	+		IAI47_13195	0.81	-1.2
2,792,200	+		IAI47_13195	0.81	+0.9
2,792,200	+		IAI47_13195	0.81	-0.9
2,792,201	-		IAI47_13195	0.81	+0.4
2,792,221	+		IAI47_13195	0.85	-1.1
2,792,222	-		IAI47_13195	0.85	-1.8
2,792,236	+		IAI47_13195	0.88	+1.0
2,792,236	+		IAI47_13195	0.88	-2.1
2,792,236	+		IAI47_13195	0.88	-1.2
2,792,237	-		IAI47_13195	0.88	+0.1
2,792,294	+				+0.4
2,792,295	-				+0.1
2,792,402	+				-1.0
2,792,402	+				+3.6
2,792,403	-				+1.2
2,792,403	-				-0.8
2,792,403	-				-0.7
2,792,419	+				+3.6
2,792,442	+				+0.9
2,792,442	+				+1.2
2,792,442	+				+0.8
2,792,442	+				-0.9
2,792,443	-				+0.7
2,792,463	+				-0.4
2,792,464	-				-0.6
2,792,464	-				-0.2
2,792,464	-				+1.4
2,792,505	+				-1.1
2,792,505	+				+0.1
2,792,506	-				+0.9
2,792,506	-				+1.1
2,792,506	-				-1.8
2,792,506	-				-0.4
2,792,511	-				-0.5
2,792,511	-				+0.9
2,792,511	-				-0.2
2,792,514	+				+1.4
2,792,515	-				+0.4
2,792,515	-				+0.7
2,792,515	-				-1.8
2,792,515	-				-1.1
2,792,554	+				-1.8
2,792,554	+				-0.0
2,792,629	+				-0.4
2,792,630	-				-1.3
2,792,687	+				-2.3
2,792,687	+				+0.6
2,792,688	-				-2.1
2,792,751	+		IAI47_13200	0.18	-1.1
2,792,751	+		IAI47_13200	0.18	+0.4
2,792,751	+		IAI47_13200	0.18	-0.2
2,792,751	+		IAI47_13200	0.18	+0.3
2,792,751	+		IAI47_13200	0.18	+1.1
2,792,751	+		IAI47_13200	0.18	+1.7
2,792,751	+		IAI47_13200	0.18	-0.1
2,792,751	+		IAI47_13200	0.18	-1.6
2,792,751	+		IAI47_13200	0.18	+0.3
2,792,751	+		IAI47_13200	0.18	+0.4
2,792,751	+		IAI47_13200	0.18	-1.3
2,792,751	+		IAI47_13200	0.18	-1.0
2,792,751	+		IAI47_13200	0.18	-1.1
2,792,751	+		IAI47_13200	0.18	+0.0
2,792,752	-		IAI47_13200	0.18	+1.4
2,792,752	-		IAI47_13200	0.18	-0.1
2,792,752	-		IAI47_13200	0.18	-1.0
2,792,752	-		IAI47_13200	0.18	-0.2
2,792,752	-		IAI47_13200	0.18	+0.4
2,792,752	-		IAI47_13200	0.18	+1.5
2,792,752	-		IAI47_13200	0.18	+0.4
2,792,808	+		IAI47_13200	0.26	-1.9
2,792,808	+		IAI47_13200	0.26	+1.0
2,792,808	+		IAI47_13200	0.26	+1.3
2,792,808	+		IAI47_13200	0.26	+0.1
2,792,808	+		IAI47_13200	0.26	-1.0
2,792,808	+		IAI47_13200	0.26	+0.7
2,792,808	+		IAI47_13200	0.26	-0.6
2,792,808	+		IAI47_13200	0.26	-0.4
2,792,809	-		IAI47_13200	0.26	+1.3
2,792,809	-		IAI47_13200	0.26	-0.9
2,792,809	-		IAI47_13200	0.26	+1.1
2,792,810	+		IAI47_13200	0.26	+1.0
2,792,810	+		IAI47_13200	0.26	+0.8
2,792,810	+		IAI47_13200	0.26	-0.7
2,792,811	-		IAI47_13200	0.26	-0.4
2,792,811	-		IAI47_13200	0.26	+0.4
2,792,811	-		IAI47_13200	0.26	+1.1
2,792,907	-		IAI47_13200	0.39	+0.3
2,792,907	-		IAI47_13200	0.39	+0.1
2,792,907	-		IAI47_13200	0.39	-0.1
2,792,935	-		IAI47_13200	0.43	-1.9
2,792,935	-		IAI47_13200	0.43	-1.2
2,792,937	+		IAI47_13200	0.43	-1.1
2,792,938	-		IAI47_13200	0.43	-1.7
2,792,956	+		IAI47_13200	0.46	+2.3
2,792,956	+		IAI47_13200	0.46	-0.4
2,792,956	+		IAI47_13200	0.46	+2.0
2,792,956	+		IAI47_13200	0.46	+0.2
2,792,957	-		IAI47_13200	0.46	+0.3
2,792,957	-		IAI47_13200	0.46	-1.1
2,792,967	-		IAI47_13200	0.47	+0.6
2,792,967	-		IAI47_13200	0.47	-1.6
2,793,071	+		IAI47_13200	0.61	+0.1
2,793,071	+		IAI47_13200	0.61	+2.5
2,793,071	+		IAI47_13200	0.61	-1.5
2,793,072	-		IAI47_13200	0.61	+0.1
2,793,108	+		IAI47_13200	0.66	+0.1
2,793,108	+		IAI47_13200	0.66	+0.1
2,793,108	+		IAI47_13200	0.66	-0.7
2,793,109	-		IAI47_13200	0.66	-0.6
2,793,109	-		IAI47_13200	0.66	-2.3
2,793,109	-		IAI47_13200	0.66	-0.1
2,793,168	+		IAI47_13200	0.74	-2.6
2,793,168	+		IAI47_13200	0.74	+1.2
2,793,169	-		IAI47_13200	0.74	-0.6
2,793,169	-		IAI47_13200	0.74	-2.3
2,793,169	-		IAI47_13200	0.74	-1.1
2,793,169	-		IAI47_13200	0.74	-0.4
2,793,188	+		IAI47_13200	0.77	+4.0
2,793,200	+		IAI47_13200	0.78	+0.8
2,793,208	+		IAI47_13200	0.79	+1.1
2,793,234	+		IAI47_13200	0.83	+2.4
2,793,234	+		IAI47_13200	0.83	+2.8
2,793,234	+		IAI47_13200	0.83	+2.4
2,793,234	+		IAI47_13200	0.83	-0.7
2,793,234	+		IAI47_13200	0.83	-2.1
2,793,234	+		IAI47_13200	0.83	+0.2
2,793,234	+		IAI47_13200	0.83	-0.1
2,793,234	+		IAI47_13200	0.83	+0.4
2,793,235	-		IAI47_13200	0.83	+0.6
2,793,235	-		IAI47_13200	0.83	+1.0
2,793,235	-		IAI47_13200	0.83	-0.6
2,793,235	-		IAI47_13200	0.83	-0.9
2,793,235	-		IAI47_13200	0.83	+0.5
2,793,268	+		IAI47_13200	0.87	-1.6
2,793,269	-		IAI47_13200	0.87	-0.5
2,793,318	+				-0.6
2,793,318	+				+0.6
2,793,318	+				-0.5
2,793,318	+				-1.9
2,793,318	+				+0.6
2,793,318	+				+0.9
2,793,318	+				+1.0
2,793,318	+				+1.7
2,793,319	-				+0.2
2,793,319	-				+0.5
2,793,319	-				-0.5
2,793,319	-				-0.4
2,793,319	-				-1.5
2,793,319	-				+0.0
2,793,319	-				-0.4
2,793,320	+				-0.3
2,793,321	-				+0.6
2,793,321	-				+0.9
2,793,330	+				+2.2
2,793,330	+				-0.7
2,793,330	+				+1.9
2,793,331	-				+0.8
2,793,331	-				-0.8
2,793,332	+				-0.2
2,793,333	-				-0.4
2,793,356	+				+0.6
2,793,356	+				+1.1
2,793,356	+				+2.4
2,793,357	-				-2.0
2,793,360	+				+0.8
2,793,363	+				-0.1
2,793,363	+				-0.1
2,793,364	-				+1.0
2,793,364	-				-0.6
2,793,364	-				-1.0
2,793,375	+				-0.1
2,793,376	-				+0.8
2,793,425	+				+0.9
2,793,425	+				-1.0
2,793,425	+				-2.2
2,793,425	+				-0.4
2,793,426	-				+0.9
2,793,426	-				-1.6
2,793,426	-				+1.0
2,793,426	-				-1.0
2,793,426	-				+0.1
2,793,426	-				-0.3
2,793,426	-				+0.0
2,793,497	+				+2.2
2,793,509	-		IAI47_13205	0.10	+1.5
2,793,511	+		IAI47_13205	0.11	+0.6
2,793,512	-		IAI47_13205	0.11	-1.3
2,793,512	-		IAI47_13205	0.11	-0.9
2,793,512	-		IAI47_13205	0.11	-0.7
2,793,521	+		IAI47_13205	0.12	-0.0
2,793,577	-		IAI47_13205	0.21	+0.0
2,793,577	-		IAI47_13205	0.21	-0.3
2,793,597	-		IAI47_13205	0.24	+1.7
2,793,624	-		IAI47_13205	0.28	+0.9
2,793,638	+		IAI47_13205	0.30	-0.6
2,793,663	+		IAI47_13205	0.34	+1.2
2,793,663	+		IAI47_13205	0.34	+0.9
2,793,663	+		IAI47_13205	0.34	-0.9
2,793,663	+		IAI47_13205	0.34	-0.6
2,793,663	+		IAI47_13205	0.34	-0.3
2,793,664	-		IAI47_13205	0.34	+2.0
2,793,664	-		IAI47_13205	0.34	-0.1
2,793,664	-		IAI47_13205	0.34	-0.4
2,793,721	+		IAI47_13205	0.42	-1.7
2,793,737	+		IAI47_13205	0.45	-1.0
2,793,737	+		IAI47_13205	0.45	-0.6
2,793,737	+		IAI47_13205	0.45	+0.2
2,793,737	+		IAI47_13205	0.45	-0.5
2,793,737	+		IAI47_13205	0.45	-0.3
2,793,738	-		IAI47_13205	0.45	+0.3
2,793,750	+		IAI47_13205	0.47	+1.0
2,793,750	+		IAI47_13205	0.47	+0.1
2,793,751	-		IAI47_13205	0.47	+0.9
2,793,752	+		IAI47_13205	0.47	-1.1
2,793,753	-		IAI47_13205	0.47	-1.4
2,793,764	+		IAI47_13205	0.49	-0.4
2,793,764	+		IAI47_13205	0.49	+1.0
2,793,765	-		IAI47_13205	0.49	-0.4
2,793,789	-		IAI47_13205	0.53	-0.8
2,793,791	+		IAI47_13205	0.53	-0.6
2,793,791	+		IAI47_13205	0.53	-1.4
2,793,791	+		IAI47_13205	0.53	-0.5
2,793,792	-		IAI47_13205	0.53	+0.3
2,793,850	-		IAI47_13205	0.62	+0.3
2,793,857	+		IAI47_13205	0.63	-1.2
2,793,857	+		IAI47_13205	0.63	+0.1
2,793,858	-		IAI47_13205	0.63	-0.3
2,793,858	-		IAI47_13205	0.63	+0.2
2,793,878	+		IAI47_13205	0.66	+4.0
2,793,879	-		IAI47_13205	0.66	+1.4
2,793,879	-		IAI47_13205	0.66	+0.1
2,793,923	+		IAI47_13205	0.73	-0.2
2,793,923	+		IAI47_13205	0.73	+0.2
2,793,924	-		IAI47_13205	0.73	-0.5
2,793,924	-		IAI47_13205	0.73	-0.9
2,793,935	+		IAI47_13205	0.75	+0.4
2,793,935	+		IAI47_13205	0.75	-0.3
2,793,936	-		IAI47_13205	0.75	+3.0
2,793,942	-		IAI47_13205	0.76	+0.7
2,793,980	+		IAI47_13205	0.82	-0.5
2,793,980	+		IAI47_13205	0.82	-1.1
2,793,981	-		IAI47_13205	0.82	-1.6
2,793,981	-		IAI47_13205	0.82	-1.9
2,793,990	-		IAI47_13205	0.83	+1.7
2,794,032	+		IAI47_13205	0.90	-1.8
2,794,032	+		IAI47_13205	0.90	-0.8
2,794,032	+		IAI47_13205	0.90	+0.4
2,794,032	+		IAI47_13205	0.90	-0.8
2,794,032	+		IAI47_13205	0.90	-1.7
2,794,032	+		IAI47_13205	0.90	-0.3
2,794,032	+		IAI47_13205	0.90	+1.0
2,794,032	+		IAI47_13205	0.90	+0.6
2,794,032	+		IAI47_13205	0.90	+0.0
2,794,032	+		IAI47_13205	0.90	+0.2
2,794,033	-		IAI47_13205	0.90	+0.2
2,794,033	-		IAI47_13205	0.90	+0.1
2,794,043	+				+0.7
2,794,043	+				-0.6
2,794,043	+				+1.1
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