Strain Fitness in Pantoea sp. MT58 around IAI47_14660

Experiment: Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
3,091,994	-				-1.0
3,091,994	-				-0.8
3,091,994	-				-0.1
3,091,998	-				+2.6
3,091,998	-				+0.6
3,091,998	-				-2.3
3,091,998	-				-0.7
3,091,998	-				-0.7
3,091,998	-				+0.5
3,091,998	-				-0.5
3,091,998	-				+0.6
3,091,998	-				-0.4
3,092,000	-				+0.3
3,092,017	-				+0.5
3,092,017	-				-0.4
3,092,017	-				-0.8
3,092,017	-				+1.0
3,092,017	-				+0.6
3,092,029	-				+0.1
3,092,698	-				-1.0
3,092,702	-				+2.6
3,092,702	-				+0.9
3,092,785	-				-1.7
3,092,785	-				-1.2
3,092,794	-				-0.5
3,092,825	+				+0.3
3,092,825	+				-1.1
3,092,826	-				-1.3
3,092,885	-				-0.2
3,092,885	-				+2.2
3,092,888	+				-0.7
3,092,888	+				-0.0
3,092,896	+				+0.1
3,092,896	+				-0.7
3,092,897	-				+0.5
3,092,897	-				-0.6
3,092,962	+				-0.3
3,092,975	+				+0.1
3,093,046	-				-0.6
3,093,046	-				-0.2
3,093,046	-				-1.5
3,093,046	-				-2.2
3,093,099	+				-1.0
3,093,099	+				-0.7
3,093,100	-				-0.9
3,093,100	-				-2.0
3,093,100	-				-1.6
3,093,100	-				-0.3
3,093,128	+		IAI47_14660	0.11	-0.9
3,093,129	-		IAI47_14660	0.11	-1.1
3,093,158	+		IAI47_14660	0.13	+0.5
3,093,158	+		IAI47_14660	0.13	-0.5
3,093,158	+		IAI47_14660	0.13	+0.1
3,093,159	-		IAI47_14660	0.13	-1.4
3,093,159	-		IAI47_14660	0.13	-1.2
3,093,190	+		IAI47_14660	0.16	+0.6
3,093,191	-		IAI47_14660	0.16	-1.1
3,093,191	-		IAI47_14660	0.16	-2.1
3,093,400	-		IAI47_14660	0.32	-2.5
3,093,477	+		IAI47_14660	0.38	-0.4
3,093,477	+		IAI47_14660	0.38	-1.3
3,093,629	+		IAI47_14660	0.49	-0.4
3,093,630	-		IAI47_14660	0.49	-0.6
3,093,630	-		IAI47_14660	0.49	-1.0
3,093,855	+		IAI47_14660	0.67	+0.9
3,093,855	+		IAI47_14660	0.67	-1.1
3,093,856	-		IAI47_14660	0.67	-0.2
3,093,856	-		IAI47_14660	0.67	-1.7
3,093,856	-		IAI47_14660	0.67	-0.7
3,093,876	+		IAI47_14660	0.68	-2.5
3,093,876	+		IAI47_14660	0.68	-1.4
3,093,876	+		IAI47_14660	0.68	-1.3
3,093,877	-		IAI47_14660	0.68	-0.9
3,093,877	-		IAI47_14660	0.68	+1.0
3,093,956	+		IAI47_14660	0.74	+0.2
3,093,977	+		IAI47_14660	0.76	-1.0
3,093,977	+		IAI47_14660	0.76	+1.2
3,093,978	-		IAI47_14660	0.76	+0.1
3,094,001	+		IAI47_14660	0.78	-0.2
3,094,002	-		IAI47_14660	0.78	+1.5
3,094,002	-		IAI47_14660	0.78	-0.2
3,094,002	-		IAI47_14660	0.78	+0.0
3,094,002	-		IAI47_14660	0.78	+0.0
3,094,016	+		IAI47_14660	0.79	-1.3
3,094,016	+		IAI47_14660	0.79	+1.6
3,094,016	+		IAI47_14660	0.79	-0.8
3,094,016	+		IAI47_14660	0.79	-1.1
3,094,016	+		IAI47_14660	0.79	-0.2
3,094,016	+		IAI47_14660	0.79	-1.2
3,094,016	+		IAI47_14660	0.79	+0.1
3,094,016	+		IAI47_14660	0.79	-0.3
3,094,017	-		IAI47_14660	0.79	+0.3
3,094,017	-		IAI47_14660	0.79	-0.2
3,094,017	-		IAI47_14660	0.79	-1.4
3,094,017	-		IAI47_14660	0.79	-0.8
3,094,119	-		IAI47_14660	0.87	+0.2
3,094,119	-		IAI47_14660	0.87	-1.8
3,094,208	-				-0.5
3,094,239	+				-0.7
3,094,240	-				+0.7
3,094,240	-				-0.6
3,094,240	-				-1.1
3,094,245	+				+0.8
3,094,245	+				-0.7
3,094,246	-				-0.1
3,094,246	-				-1.4
3,094,246	-				+0.3
3,094,296	+				-3.9
3,094,296	+				-2.0
3,094,296	+				-1.3
3,094,296	+				-1.1
3,094,340	+				-0.7
3,094,340	+				-0.9
3,094,340	+				-0.0
3,094,341	-				+0.2
3,094,341	-				+1.7
3,094,341	-				-1.2
3,094,341	-				+1.8
3,094,345	-				-0.3
3,094,402	-				-0.8
3,094,446	+				-1.7
3,094,447	-				-0.3
3,094,447	-				+0.6
3,094,447	-				+0.9
3,094,447	-				-1.2
3,094,448	+				-0.2
3,094,448	+				+0.0
3,094,449	-				-1.5
3,094,449	-				-2.6
3,094,449	-				-1.0
3,094,479	+				+1.3
3,094,479	+				+0.5
3,094,479	+				-0.7
3,094,480	-				+1.3
3,094,480	-				+0.7
3,094,595	+				-2.1
3,094,627	-		IAI47_14665	0.14	+0.8
3,094,627	-		IAI47_14665	0.14	+1.3
3,094,632	-		IAI47_14665	0.15	+1.8
3,094,663	+		IAI47_14665	0.25	+0.5
3,094,663	+		IAI47_14665	0.25	+0.8
3,094,663	+		IAI47_14665	0.25	+1.2
3,094,663	+		IAI47_14665	0.25	+1.0
3,094,663	+		IAI47_14665	0.25	+0.8
3,094,664	-		IAI47_14665	0.25	-0.4
3,094,664	-		IAI47_14665	0.25	-0.2
3,094,664	-		IAI47_14665	0.25	+1.7
3,094,664	-		IAI47_14665	0.25	-0.6
3,094,664	-		IAI47_14665	0.25	+0.4
3,094,664	-		IAI47_14665	0.25	-0.6
3,094,664	-		IAI47_14665	0.25	+2.1
3,094,664	-		IAI47_14665	0.25	+0.6
3,094,664	-		IAI47_14665	0.25	-1.9
3,094,664	-		IAI47_14665	0.25	+2.0
3,094,667	+		IAI47_14665	0.26	-1.5
3,094,667	+		IAI47_14665	0.26	-0.7
3,094,667	+		IAI47_14665	0.26	-2.0
3,094,667	+		IAI47_14665	0.26	-2.4
3,094,667	+		IAI47_14665	0.26	-0.6
3,094,667	+		IAI47_14665	0.26	-0.9
3,094,667	+		IAI47_14665	0.26	-0.3
3,094,667	+		IAI47_14665	0.26	+0.4
3,094,667	+		IAI47_14665	0.26	-1.0
3,094,668	-		IAI47_14665	0.27	+2.3
3,094,668	-		IAI47_14665	0.27	-0.8
3,094,668	-		IAI47_14665	0.27	+0.5
3,094,668	-		IAI47_14665	0.27	+0.1
3,094,668	-		IAI47_14665	0.27	-1.7
3,094,668	-		IAI47_14665	0.27	+0.8
3,094,668	-		IAI47_14665	0.27	-0.2
3,094,668	-		IAI47_14665	0.27	+0.6
3,094,668	-		IAI47_14665	0.27	+1.6
3,094,668	-		IAI47_14665	0.27	+0.8
3,094,668	-		IAI47_14665	0.27	+1.5
3,094,668	-		IAI47_14665	0.27	+0.9
3,094,668	-		IAI47_14665	0.27	-0.1
3,094,668	-		IAI47_14665	0.27	+1.6
3,094,668	-		IAI47_14665	0.27	+0.2
3,094,668	-		IAI47_14665	0.27	-0.9
3,094,677	+		IAI47_14665	0.30	+0.5
3,094,678	-		IAI47_14665	0.30	-1.1
3,094,720	+		IAI47_14665	0.43	-0.6
3,094,721	-		IAI47_14665	0.43	+2.9
3,094,721	-		IAI47_14665	0.43	-0.0
3,094,726	-		IAI47_14665	0.45	+1.3
3,094,726	-		IAI47_14665	0.45	-0.1
3,094,822	+		IAI47_14665	0.76	+1.9
3,094,881	+				+0.6
3,094,881	+				+0.3
3,094,882	-				-2.5
3,094,882	-				-0.8
3,094,902	+				-0.2
3,094,902	+				-0.1
3,094,903	-				+2.9
3,094,903	-				-1.0
3,094,903	-				-1.5
3,094,903	-				-0.4
3,094,905	+				-0.9
3,094,905	+				+0.0
3,094,905	+				-0.9
3,094,905	+				+2.5
3,094,905	+				+1.7
3,094,905	+				+0.4
3,094,905	+				-2.1
3,094,905	+				-1.0
3,094,905	+				-0.5
3,094,906	-				-0.1
3,094,906	-				+0.3
3,094,906	-				-0.0
3,094,948	-				-0.1
3,094,984	-				+0.1
3,094,984	-				+0.3
3,094,987	+				-2.5
3,094,988	-				-1.2
3,094,988	-				+2.1
3,094,997	+				+0.4
3,094,997	+				-0.7
3,094,998	-				+0.9
3,094,998	-				-0.4
3,095,022	+				-0.3
3,095,022	+				-1.3
3,095,022	+				-0.0
3,095,023	-				+0.1
3,095,023	-				+1.0
3,095,023	-				-0.9
3,095,023	-				-1.1
3,095,025	+				-0.2
3,095,025	+				+0.6
3,095,025	+				-1.5
3,095,025	+				+0.7
3,095,025	+				-0.1
3,095,025	+				+0.3
3,095,025	+				-1.1
3,095,026	-				+0.3
3,095,026	-				+1.4
3,095,026	-				-1.6
3,095,026	-				-0.4
3,095,026	-				+1.7
3,095,027	-				+0.6
3,095,030	+				+0.3
3,095,030	+				+1.3
3,095,030	+				-0.8
3,095,030	+				+1.6
3,095,030	+				+1.7
3,095,031	-				-0.3
3,095,031	-				+1.3
3,095,031	-				-0.2
3,095,031	-				-0.2
3,095,031	-				+0.8
3,095,051	+				-0.7
3,095,052	-				-0.0
3,095,052	-				+1.6
3,095,052	-				-1.9
3,095,052	-				+1.8
3,095,052	-				+0.7
3,095,072	+				-0.4
3,095,072	+				+0.8
3,095,072	+				-0.4
3,095,072	+				+0.4
3,095,073	-				-0.6
3,095,132	+				-0.8
3,095,132	+				+1.7
3,095,132	+				-0.7
3,095,132	+				-0.2
3,095,132	+				+0.1
3,095,132	+				+0.4
3,095,132	+				-1.2
3,095,133	-				+2.1
3,095,133	-				-0.5
3,095,133	-				-1.6
3,095,133	-				-0.5
3,095,133	-				-1.3
3,095,133	-				+1.9
3,095,133	-				+0.9
3,095,184	+				+0.2
3,095,184	+				+2.1
3,095,185	-				+1.5
3,095,185	-				-0.1
3,095,201	+				-1.2
3,095,202	-				-0.9
3,095,202	-				+0.7
3,095,228	+				-0.9
3,095,250	+		IAI47_14670	0.11	+1.0
3,095,250	+		IAI47_14670	0.11	+1.0
3,095,251	-		IAI47_14670	0.11	+3.2
3,095,251	-		IAI47_14670	0.11	+1.8
3,095,251	-		IAI47_14670	0.11	-0.7
3,095,251	-		IAI47_14670	0.11	-1.1
3,095,251	-		IAI47_14670	0.11	-1.0
3,095,254	-		IAI47_14670	0.12	-1.3
3,095,254	-		IAI47_14670	0.12	+0.5
3,095,254	-		IAI47_14670	0.12	+0.9
3,095,272	-		IAI47_14670	0.15	+1.0