Strain Fitness in Pantoea sp. MT58 around IAI47_14265

Experiment: Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
3,015,151	+		IAI47_14260	0.50	+1.4
3,015,151	+		IAI47_14260	0.50	-2.0
3,015,151	+		IAI47_14260	0.50	-0.8
3,015,152	-		IAI47_14260	0.50	+1.3
3,015,152	-		IAI47_14260	0.50	-0.8
3,015,208	+		IAI47_14260	0.53	+0.7
3,015,208	+		IAI47_14260	0.53	+3.1
3,015,208	+		IAI47_14260	0.53	-0.2
3,015,208	+		IAI47_14260	0.53	+1.0
3,015,208	+		IAI47_14260	0.53	+0.7
3,015,209	-		IAI47_14260	0.53	+0.4
3,015,209	-		IAI47_14260	0.53	+0.4
3,015,209	-		IAI47_14260	0.53	-0.9
3,015,209	-		IAI47_14260	0.53	+1.0
3,015,209	-		IAI47_14260	0.53	-0.1
3,015,209	-		IAI47_14260	0.53	-0.2
3,015,209	-		IAI47_14260	0.53	-0.4
3,015,211	+		IAI47_14260	0.53	+0.6
3,015,211	+		IAI47_14260	0.53	+0.3
3,015,211	+		IAI47_14260	0.53	+0.9
3,015,211	+		IAI47_14260	0.53	-1.5
3,015,211	+		IAI47_14260	0.53	-0.2
3,015,211	+		IAI47_14260	0.53	-0.9
3,015,211	+		IAI47_14260	0.53	+1.8
3,015,212	-		IAI47_14260	0.53	-1.4
3,015,212	-		IAI47_14260	0.53	-0.2
3,015,212	-		IAI47_14260	0.53	-1.3
3,015,212	-		IAI47_14260	0.53	-0.2
3,015,212	-		IAI47_14260	0.53	-0.6
3,015,212	-		IAI47_14260	0.53	-0.1
3,015,213	+		IAI47_14260	0.53	+0.8
3,015,213	+		IAI47_14260	0.53	+0.1
3,015,213	+		IAI47_14260	0.53	-1.1
3,015,213	+		IAI47_14260	0.53	-0.2
3,015,213	+		IAI47_14260	0.53	+1.3
3,015,213	+		IAI47_14260	0.53	-0.2
3,015,213	+		IAI47_14260	0.53	+0.0
3,015,213	+		IAI47_14260	0.53	-1.3
3,015,213	+		IAI47_14260	0.53	+0.2
3,015,213	+		IAI47_14260	0.53	+0.3
3,015,214	-		IAI47_14260	0.53	-0.4
3,015,214	-		IAI47_14260	0.53	+1.3
3,015,214	-		IAI47_14260	0.53	+0.6
3,015,214	-		IAI47_14260	0.53	+0.1
3,015,214	-		IAI47_14260	0.53	-0.2
3,015,266	+		IAI47_14260	0.56	-1.2
3,015,266	+		IAI47_14260	0.56	-0.6
3,015,266	+		IAI47_14260	0.56	+0.5
3,015,267	-		IAI47_14260	0.56	-2.2
3,015,372	+		IAI47_14260	0.61	-0.2
3,015,372	+		IAI47_14260	0.61	-2.4
3,015,372	+		IAI47_14260	0.61	+0.3
3,015,373	-		IAI47_14260	0.61	+1.2
3,015,405	+		IAI47_14260	0.63	-0.2
3,015,405	+		IAI47_14260	0.63	+0.4
3,015,405	+		IAI47_14260	0.63	-0.4
3,015,405	+		IAI47_14260	0.63	+0.2
3,015,405	+		IAI47_14260	0.63	+0.3
3,015,405	+		IAI47_14260	0.63	-1.3
3,015,406	-		IAI47_14260	0.63	+1.4
3,015,406	-		IAI47_14260	0.63	-1.0
3,015,406	-		IAI47_14260	0.63	-1.6
3,015,406	-		IAI47_14260	0.63	-1.9
3,015,406	-		IAI47_14260	0.63	+1.1
3,015,406	-		IAI47_14260	0.63	-1.0
3,015,406	-		IAI47_14260	0.63	-0.2
3,015,418	+		IAI47_14260	0.63	+3.1
3,015,418	+		IAI47_14260	0.63	-0.6
3,015,418	+		IAI47_14260	0.63	+0.1
3,015,418	+		IAI47_14260	0.63	+2.5
3,015,418	+		IAI47_14260	0.63	+0.9
3,015,419	-		IAI47_14260	0.63	-2.3
3,015,419	-		IAI47_14260	0.63	+0.4
3,015,419	-		IAI47_14260	0.63	-0.8
3,015,419	-		IAI47_14260	0.63	-0.6
3,015,419	-		IAI47_14260	0.63	-2.3
3,015,469	+		IAI47_14260	0.66	-0.7
3,015,469	+		IAI47_14260	0.66	+0.6
3,015,469	+		IAI47_14260	0.66	-0.9
3,015,469	+		IAI47_14260	0.66	+0.6
3,015,469	+		IAI47_14260	0.66	+0.3
3,015,471	+		IAI47_14260	0.66	-0.1
3,015,471	+		IAI47_14260	0.66	-0.9
3,015,472	-		IAI47_14260	0.66	+1.0
3,015,472	-		IAI47_14260	0.66	-2.4
3,015,472	-		IAI47_14260	0.66	-1.3
3,015,472	-		IAI47_14260	0.66	+1.7
3,015,472	-		IAI47_14260	0.66	-0.9
3,015,497	+		IAI47_14260	0.67	-0.6
3,015,497	+		IAI47_14260	0.67	+1.4
3,015,497	+		IAI47_14260	0.67	-0.9
3,015,497	+		IAI47_14260	0.67	-1.5
3,015,498	-		IAI47_14260	0.67	-1.3
3,015,498	-		IAI47_14260	0.67	+0.2
3,015,498	-		IAI47_14260	0.67	+0.4
3,015,498	-		IAI47_14260	0.67	+0.5
3,015,556	-		IAI47_14260	0.70	-0.7
3,015,572	+		IAI47_14260	0.71	-2.8
3,015,572	+		IAI47_14260	0.71	+0.3
3,015,573	-		IAI47_14260	0.71	-1.2
3,015,573	-		IAI47_14260	0.71	-1.7
3,015,573	-		IAI47_14260	0.71	+1.3
3,015,573	-		IAI47_14260	0.71	+0.5
3,015,573	-		IAI47_14260	0.71	+0.3
3,015,583	-		IAI47_14260	0.72	-0.9
3,015,616	+		IAI47_14260	0.73	+0.3
3,015,616	+		IAI47_14260	0.73	-1.7
3,015,616	+		IAI47_14260	0.73	-0.2
3,015,616	+		IAI47_14260	0.73	-0.6
3,015,616	+		IAI47_14260	0.73	-0.4
3,015,616	+		IAI47_14260	0.73	+0.2
3,015,616	+		IAI47_14260	0.73	+0.5
3,015,616	+		IAI47_14260	0.73	+1.3
3,015,616	+		IAI47_14260	0.73	+1.1
3,015,616	+		IAI47_14260	0.73	-0.5
3,015,616	+		IAI47_14260	0.73	-0.6
3,015,616	+		IAI47_14260	0.73	+0.3
3,015,617	-		IAI47_14260	0.73	-0.8
3,015,617	-		IAI47_14260	0.73	-1.9
3,015,617	-		IAI47_14260	0.73	+1.6
3,015,617	-		IAI47_14260	0.73	+1.7
3,015,617	-		IAI47_14260	0.73	-0.6
3,015,617	-		IAI47_14260	0.73	+0.4
3,015,617	-		IAI47_14260	0.73	-1.1
3,015,617	-		IAI47_14260	0.73	+0.6
3,015,617	-		IAI47_14260	0.73	-1.5
3,015,617	-		IAI47_14260	0.73	+0.3
3,015,646	-		IAI47_14260	0.75	-1.2
3,015,702	+		IAI47_14260	0.78	+0.9
3,015,703	-		IAI47_14260	0.78	-0.6
3,015,709	+		IAI47_14260	0.78	-1.1
3,015,709	+		IAI47_14260	0.78	+1.2
3,015,709	+		IAI47_14260	0.78	+1.0
3,015,709	+		IAI47_14260	0.78	+0.5
3,015,709	+		IAI47_14260	0.78	+0.6
3,015,710	-		IAI47_14260	0.78	+2.6
3,015,714	+		IAI47_14260	0.78	-0.1
3,015,714	+		IAI47_14260	0.78	+2.6
3,015,714	+		IAI47_14260	0.78	-1.1
3,015,714	+		IAI47_14260	0.78	-1.8
3,015,714	+		IAI47_14260	0.78	+1.9
3,015,714	+		IAI47_14260	0.78	+0.2
3,015,714	+		IAI47_14260	0.78	+0.3
3,015,715	-		IAI47_14260	0.78	+1.6
3,015,715	-		IAI47_14260	0.78	+0.0
3,015,715	-		IAI47_14260	0.78	+0.7
3,015,715	-		IAI47_14260	0.78	-0.5
3,015,715	-		IAI47_14260	0.78	-0.7
3,015,715	-		IAI47_14260	0.78	-0.3
3,015,715	-		IAI47_14260	0.78	-1.0
3,015,715	-		IAI47_14260	0.78	+2.6
3,015,729	+		IAI47_14260	0.79	-0.1
3,015,729	+		IAI47_14260	0.79	+0.6
3,015,729	+		IAI47_14260	0.79	-0.4
3,015,729	+		IAI47_14260	0.79	-0.5
3,015,729	+		IAI47_14260	0.79	+0.4
3,015,729	+		IAI47_14260	0.79	-1.1
3,015,730	-		IAI47_14260	0.79	+0.8
3,015,730	-		IAI47_14260	0.79	-1.3
3,015,730	-		IAI47_14260	0.79	+0.8
3,015,740	+		IAI47_14260	0.80	+2.1
3,015,741	-		IAI47_14260	0.80	-0.8
3,015,741	-		IAI47_14260	0.80	-0.6
3,015,741	-		IAI47_14260	0.80	+0.7
3,015,766	+		IAI47_14260	0.81	+0.4
3,015,776	+		IAI47_14260	0.81	+0.1
3,015,806	+		IAI47_14260	0.83	+1.6
3,015,806	+		IAI47_14260	0.83	-0.0
3,015,806	+		IAI47_14260	0.83	+0.8
3,015,807	-		IAI47_14260	0.83	-2.0
3,015,807	-		IAI47_14260	0.83	+0.6
3,015,807	-		IAI47_14260	0.83	-2.4
3,015,807	-		IAI47_14260	0.83	+1.4
3,015,807	-		IAI47_14260	0.83	-1.3
3,015,808	+		IAI47_14260	0.83	+0.3
3,015,808	+		IAI47_14260	0.83	+2.4
3,015,808	+		IAI47_14260	0.83	+0.2
3,015,809	-		IAI47_14260	0.83	-0.8
3,015,809	-		IAI47_14260	0.83	-1.0
3,015,809	-		IAI47_14260	0.83	-1.7
3,015,809	-		IAI47_14260	0.83	+0.1
3,015,809	-		IAI47_14260	0.83	-0.7
3,015,809	-		IAI47_14260	0.83	+0.7
3,015,816	+		IAI47_14260	0.83	-0.4
3,015,818	+		IAI47_14260	0.84	+0.6
3,015,819	-		IAI47_14260	0.84	-0.5
3,015,819	-		IAI47_14260	0.84	+0.3
3,015,819	-		IAI47_14260	0.84	-0.2
3,015,819	-		IAI47_14260	0.84	-1.2
3,015,819	-		IAI47_14260	0.84	+0.5
3,015,830	-		IAI47_14260	0.84	-0.8
3,015,864	-		IAI47_14260	0.86	+2.0
3,015,880	+		IAI47_14260	0.87	+1.1
3,015,881	-		IAI47_14260	0.87	-0.4
3,015,881	-		IAI47_14260	0.87	-0.9
3,015,881	-		IAI47_14260	0.87	+0.3
3,015,920	+		IAI47_14260	0.89	+3.5
3,015,936	+		IAI47_14260	0.89	+1.0
3,015,936	+		IAI47_14260	0.89	+0.1
3,015,937	-		IAI47_14260	0.90	+1.4
3,016,063	+				+0.8
3,016,063	+				+1.6
3,016,064	-				+3.8
3,016,139	+				+0.4
3,016,139	+				+0.1
3,016,140	-				+2.2
3,016,146	+				-0.0
3,016,146	+				+1.7
3,016,146	+				-0.6
3,016,146	+				+0.7
3,016,147	-				+0.4
3,016,147	-				+0.7
3,016,147	-				+1.5
3,016,147	-				-1.7
3,016,150	+				-1.3
3,016,151	-				-1.4
3,016,151	-				+0.1
3,016,173	+				-1.4
3,016,177	+				-0.7
3,016,177	+				-0.4
3,016,177	+				-1.3
3,016,177	+				+0.1
3,016,177	+				+0.4
3,016,178	-				-1.8
3,016,178	-				+1.0
3,016,178	-				-0.3
3,016,266	-		IAI47_14265	0.12	-0.7
3,016,269	+		IAI47_14265	0.13	-1.9
3,016,270	-		IAI47_14265	0.13	+0.6
3,016,303	+		IAI47_14265	0.16	+2.1
3,016,304	-		IAI47_14265	0.17	+0.3
3,016,320	+		IAI47_14265	0.18	-1.0
3,016,320	+		IAI47_14265	0.18	-1.6
3,016,333	+		IAI47_14265	0.20	-2.5
3,016,334	-		IAI47_14265	0.20	+1.3
3,016,354	+		IAI47_14265	0.22	-0.1
3,016,354	+		IAI47_14265	0.22	+1.4
3,016,354	+		IAI47_14265	0.22	+1.9
3,016,354	+		IAI47_14265	0.22	+0.9
3,016,354	+		IAI47_14265	0.22	-0.4
3,016,354	+		IAI47_14265	0.22	-2.2
3,016,355	-		IAI47_14265	0.22	+2.7
3,016,355	-		IAI47_14265	0.22	+1.4
3,016,355	-		IAI47_14265	0.22	+1.1
3,016,355	-		IAI47_14265	0.22	-0.2
3,016,355	-		IAI47_14265	0.22	+3.6
3,016,371	+		IAI47_14265	0.24	+0.5
3,016,372	-		IAI47_14265	0.24	+1.9
3,016,372	-		IAI47_14265	0.24	+1.0
3,016,436	+				+0.8
3,016,437	-		IAI47_14265	0.31	+1.5
3,016,437	-		IAI47_14265	0.31	-0.6
3,016,437	-		IAI47_14265	0.31	+0.3
3,016,595	+		IAI47_14265	0.48	-0.5
3,016,595	+		IAI47_14265	0.48	-2.5
3,016,595	+		IAI47_14265	0.48	-0.7
3,016,595	+		IAI47_14265	0.48	+1.0
3,016,596	-		IAI47_14265	0.48	-1.0
3,016,699	+		IAI47_14265	0.59	+1.2
3,016,708	+		IAI47_14265	0.60	+0.9
3,016,708	+		IAI47_14265	0.60	-0.5
3,016,708	+		IAI47_14265	0.60	-1.9
3,016,709	-		IAI47_14265	0.60	-0.0
3,016,709	-		IAI47_14265	0.60	-0.1
3,016,709	-		IAI47_14265	0.60	-0.8
3,016,709	-		IAI47_14265	0.60	-1.2
3,016,712	-		IAI47_14265	0.60	-1.1
3,016,717	+		IAI47_14265	0.61	+2.2
3,016,718	-		IAI47_14265	0.61	+0.2
3,016,718	-		IAI47_14265	0.61	-0.4
3,016,721	+		IAI47_14265	0.61	+0.8
3,016,721	+		IAI47_14265	0.61	-0.5
3,016,736	-		IAI47_14265	0.63	-0.7
3,016,757	+		IAI47_14265	0.65	+1.8
3,016,758	-		IAI47_14265	0.65	+2.1
3,016,761	-		IAI47_14265	0.65	-0.0
3,016,766	+		IAI47_14265	0.66	-0.0
3,016,766	+		IAI47_14265	0.66	-0.3
3,016,767	-		IAI47_14265	0.66	+0.5
3,016,772	+		IAI47_14265	0.67	-1.0
3,016,772	+		IAI47_14265	0.67	-1.3
3,016,772	+		IAI47_14265	0.67	+0.1
3,016,772	+		IAI47_14265	0.67	-0.4
3,016,772	+		IAI47_14265	0.67	+1.8
3,016,773	-		IAI47_14265	0.67	+0.6
3,016,773	-		IAI47_14265	0.67	-0.0
3,016,773	-		IAI47_14265	0.67	+4.0
3,016,773	-		IAI47_14265	0.67	+1.3
3,016,773	-		IAI47_14265	0.67	-0.3
3,016,773	-		IAI47_14265	0.67	-0.7
3,016,773	-		IAI47_14265	0.67	-0.0
3,016,773	-		IAI47_14265	0.67	-1.2
3,016,790	+		IAI47_14265	0.68	+1.6
3,016,790	+		IAI47_14265	0.68	-0.7
3,016,791	-		IAI47_14265	0.69	-1.9
3,016,804	+		IAI47_14265	0.70	-0.9
3,016,807	+		IAI47_14265	0.70	+0.7
3,016,807	+		IAI47_14265	0.70	-1.0
3,016,808	-		IAI47_14265	0.70	-0.5
3,016,829	+		IAI47_14265	0.73	+1.6
3,016,829	+		IAI47_14265	0.73	+2.2
3,016,829	+		IAI47_14265	0.73	-0.1
3,016,830	-		IAI47_14265	0.73	+2.2
3,016,830	-		IAI47_14265	0.73	+4.2
3,016,831	+		IAI47_14265	0.73	-0.2
3,016,831	+		IAI47_14265	0.73	+1.6
3,016,831	+		IAI47_14265	0.73	-1.3
3,016,831	+		IAI47_14265	0.73	+0.9
3,016,832	-		IAI47_14265	0.73	-0.5
3,016,832	-		IAI47_14265	0.73	+0.1
3,016,832	-		IAI47_14265	0.73	+1.3
3,016,843	-		IAI47_14265	0.74	+0.1
3,016,870	+		IAI47_14265	0.77	+0.3
3,016,870	+		IAI47_14265	0.77	+1.1
3,016,870	+		IAI47_14265	0.77	+0.6
3,016,871	-		IAI47_14265	0.77	-2.7
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