Strain Fitness in Pantoea sp. MT58 around IAI47_13280

Experiment: Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
2,807,320	+		IAI47_13275	0.47	-0.6
2,807,326	+		IAI47_13275	0.48	+0.8
2,807,326	+		IAI47_13275	0.48	+0.1
2,807,326	+		IAI47_13275	0.48	+0.9
2,807,327	-		IAI47_13275	0.48	+0.1
2,807,382	+		IAI47_13275	0.51	-0.2
2,807,382	+		IAI47_13275	0.51	-0.3
2,807,383	-		IAI47_13275	0.51	+0.4
2,807,410	+		IAI47_13275	0.53	-1.0
2,807,438	+		IAI47_13275	0.55	+0.6
2,807,438	+		IAI47_13275	0.55	-0.6
2,807,439	-		IAI47_13275	0.55	-0.3
2,807,617	+		IAI47_13275	0.66	-0.1
2,807,617	+		IAI47_13275	0.66	-0.1
2,807,618	-		IAI47_13275	0.66	-2.2
2,807,691	+		IAI47_13275	0.71	-0.5
2,807,691	+		IAI47_13275	0.71	+1.3
2,807,692	-		IAI47_13275	0.71	-0.3
2,807,743	+		IAI47_13275	0.74	-1.2
2,807,743	+		IAI47_13275	0.74	-1.5
2,807,743	+		IAI47_13275	0.74	-0.2
2,807,743	+		IAI47_13275	0.74	+1.1
2,807,811	+		IAI47_13275	0.79	+0.8
2,807,811	+		IAI47_13275	0.79	-1.2
2,807,812	-		IAI47_13275	0.79	-0.8
2,807,812	-		IAI47_13275	0.79	+0.2
2,807,812	-		IAI47_13275	0.79	-0.2
2,807,812	-		IAI47_13275	0.79	+0.9
2,807,864	+		IAI47_13275	0.82	+0.5
2,807,864	+		IAI47_13275	0.82	-2.1
2,807,864	+		IAI47_13275	0.82	-2.0
2,807,864	+		IAI47_13275	0.82	-0.3
2,807,864	+		IAI47_13275	0.82	+1.8
2,807,864	+		IAI47_13275	0.82	-0.3
2,807,865	-		IAI47_13275	0.82	+0.2
2,807,865	-		IAI47_13275	0.82	+0.1
2,807,896	+		IAI47_13275	0.84	-0.0
2,807,897	-		IAI47_13275	0.84	+0.1
2,807,918	-		IAI47_13275	0.86	-1.6
2,808,143	-				-0.3
2,808,155	-				-0.1
2,808,155	-				+0.4
2,808,311	+				-0.1
2,808,475	+		IAI47_13280	0.19	-1.4
2,808,476	-		IAI47_13280	0.19	-1.0
2,808,476	-		IAI47_13280	0.19	+0.2
2,808,523	+		IAI47_13280	0.22	-0.2
2,808,524	-		IAI47_13280	0.22	+1.4
2,808,542	+		IAI47_13280	0.23	-1.7
2,808,542	+		IAI47_13280	0.23	-2.5
2,808,542	+		IAI47_13280	0.23	+0.7
2,808,543	-		IAI47_13280	0.23	-1.3
2,808,543	-		IAI47_13280	0.23	-0.6
2,808,543	-		IAI47_13280	0.23	+1.6
2,808,543	-		IAI47_13280	0.23	+0.4
2,808,543	-		IAI47_13280	0.23	-0.1
2,808,543	-		IAI47_13280	0.23	+1.2
2,808,572	+		IAI47_13280	0.25	-0.9
2,808,572	+		IAI47_13280	0.25	-0.2
2,808,572	+		IAI47_13280	0.25	+0.5
2,808,572	+		IAI47_13280	0.25	+1.7
2,808,572	+		IAI47_13280	0.25	-2.2
2,808,572	+		IAI47_13280	0.25	-0.2
2,808,573	-		IAI47_13280	0.25	-1.0
2,808,573	-		IAI47_13280	0.25	+1.5
2,808,573	-		IAI47_13280	0.25	+0.2
2,808,573	-		IAI47_13280	0.25	-0.4
2,808,574	+		IAI47_13280	0.25	-1.4
2,808,574	+		IAI47_13280	0.25	+1.5
2,808,574	+		IAI47_13280	0.25	-0.5
2,808,574	+		IAI47_13280	0.25	+1.0
2,808,575	-		IAI47_13280	0.25	-0.7
2,808,575	-		IAI47_13280	0.25	-0.7
2,808,605	+		IAI47_13280	0.27	-1.2
2,808,605	+		IAI47_13280	0.27	+0.4
2,808,605	+		IAI47_13280	0.27	-0.6
2,808,605	+		IAI47_13280	0.27	-0.9
2,808,605	+		IAI47_13280	0.27	-1.3
2,808,606	-		IAI47_13280	0.27	-1.3
2,808,606	-		IAI47_13280	0.27	-1.3
2,808,606	-		IAI47_13280	0.27	-1.0
2,808,606	-		IAI47_13280	0.27	-1.1
2,808,606	-		IAI47_13280	0.27	+0.6
2,808,606	-		IAI47_13280	0.27	+1.3
2,808,638	+		IAI47_13280	0.29	+0.1
2,808,638	+		IAI47_13280	0.29	+1.4
2,808,638	+		IAI47_13280	0.29	-0.7
2,808,638	+		IAI47_13280	0.29	-0.3
2,808,639	-		IAI47_13280	0.29	-3.2
2,808,639	-		IAI47_13280	0.29	+1.0
2,808,639	-		IAI47_13280	0.29	-0.3
2,808,640	+		IAI47_13280	0.29	-0.3
2,808,641	-		IAI47_13280	0.29	-1.0
2,808,641	-		IAI47_13280	0.29	-0.4
2,808,641	-		IAI47_13280	0.29	-0.1
2,808,736	-		IAI47_13280	0.34	-0.7
2,808,788	+		IAI47_13280	0.38	-0.5
2,808,788	+		IAI47_13280	0.38	+0.5
2,808,789	-		IAI47_13280	0.38	-0.2
2,808,792	+		IAI47_13280	0.38	+0.8
2,808,793	-		IAI47_13280	0.38	-0.0
2,808,793	-		IAI47_13280	0.38	-0.3
2,808,793	-		IAI47_13280	0.38	+0.4
2,808,797	+		IAI47_13280	0.38	+1.0
2,808,798	-		IAI47_13280	0.38	-0.2
2,808,798	-		IAI47_13280	0.38	-1.7
2,808,981	+		IAI47_13280	0.49	+1.0
2,808,981	+		IAI47_13280	0.49	+0.5
2,808,982	-		IAI47_13280	0.49	+0.6
2,808,982	-		IAI47_13280	0.49	+1.6
2,808,982	-		IAI47_13280	0.49	-0.0
2,808,989	+		IAI47_13280	0.49	-0.7
2,808,989	+		IAI47_13280	0.49	+0.6
2,808,990	-		IAI47_13280	0.50	+1.7
2,809,075	+		IAI47_13280	0.55	+1.2
2,809,076	-		IAI47_13280	0.55	-0.7
2,809,114	+		IAI47_13280	0.57	+0.3
2,809,115	-		IAI47_13280	0.57	-0.8
2,809,121	-		IAI47_13280	0.57	-0.4
2,809,121	-		IAI47_13280	0.57	-0.5
2,809,136	+		IAI47_13280	0.58	+1.3
2,809,137	-		IAI47_13280	0.58	+2.4
2,809,207	-		IAI47_13280	0.62	+2.5
2,809,214	+		IAI47_13280	0.63	+0.6
2,809,214	+		IAI47_13280	0.63	-0.2
2,809,215	-		IAI47_13280	0.63	+0.5
2,809,215	-		IAI47_13280	0.63	-0.7
2,809,215	-		IAI47_13280	0.63	-0.0
2,809,215	-		IAI47_13280	0.63	-1.6
2,809,217	-		IAI47_13280	0.63	+0.8
2,809,285	+		IAI47_13280	0.67	-0.7
2,809,287	+		IAI47_13280	0.67	-0.2
2,809,289	+		IAI47_13280	0.67	+1.5
2,809,289	+		IAI47_13280	0.67	-1.1
2,809,289	+		IAI47_13280	0.67	-1.1
2,809,289	+		IAI47_13280	0.67	-1.2
2,809,289	+		IAI47_13280	0.67	+1.6
2,809,289	+		IAI47_13280	0.67	+0.2
2,809,289	+		IAI47_13280	0.67	-0.4
2,809,289	+		IAI47_13280	0.67	+1.0
2,809,289	+		IAI47_13280	0.67	+0.9
2,809,290	-		IAI47_13280	0.67	-1.8
2,809,290	-		IAI47_13280	0.67	+1.1
2,809,290	-		IAI47_13280	0.67	+1.4
2,809,290	-		IAI47_13280	0.67	+1.0
2,809,290	-		IAI47_13280	0.67	-0.7
2,809,290	-		IAI47_13280	0.67	-0.1
2,809,290	-		IAI47_13280	0.67	+0.3
2,809,290	-		IAI47_13280	0.67	+0.4
2,809,290	-		IAI47_13280	0.67	+1.0
2,809,309	+		IAI47_13280	0.68	-0.3
2,809,309	+		IAI47_13280	0.68	-0.1
2,809,310	-		IAI47_13280	0.69	+0.7
2,809,354	+		IAI47_13280	0.71	-0.6
2,809,355	-		IAI47_13280	0.71	+1.1
2,809,355	-		IAI47_13280	0.71	-0.6
2,809,396	+		IAI47_13280	0.74	-0.9
2,809,396	+		IAI47_13280	0.74	+0.6
2,809,396	+		IAI47_13280	0.74	-0.5
2,809,396	+		IAI47_13280	0.74	+0.1
2,809,396	+		IAI47_13280	0.74	-1.2
2,809,397	-		IAI47_13280	0.74	+2.4
2,809,397	-		IAI47_13280	0.74	-1.9
2,809,397	-		IAI47_13280	0.74	+0.2
2,809,397	-		IAI47_13280	0.74	-0.4
2,809,397	-		IAI47_13280	0.74	+2.1
2,809,681	-				+0.1
2,809,734	+				+0.9
2,809,734	+				+0.3
2,809,781	+				-1.2
2,809,782	-				-1.7
2,809,839	-				+0.9
2,809,839	-				-0.2
2,809,847	-				-0.0
2,809,856	+				-1.0
2,809,857	-				+0.2
2,809,931	+				-1.2
2,809,931	+				+0.6
2,809,931	+				+0.5
2,809,931	+				+1.1
2,809,932	-				-0.5
2,809,935	-				+1.1
2,809,935	-				+0.0
2,809,938	+				+0.7
2,809,938	+				+0.4
2,809,938	+				+1.4
2,809,938	+				-0.9
2,809,939	-				-2.2
2,809,939	-				+1.0
2,809,953	+				+0.2
2,809,959	-				+0.6
2,809,959	-				-0.4
2,809,959	-				+0.5
2,809,959	-				+1.6
2,809,960	+				+0.9
2,809,966	+				+1.0
2,809,966	+				+2.3
2,809,966	+				-0.1
2,809,966	+				-0.1
2,809,967	-				-0.2
2,809,967	-				-0.6
2,809,967	-				-0.8
2,809,967	-				+0.9
2,809,967	-				-0.3
2,809,967	-				+1.1
2,809,967	-				-0.3
2,809,970	+				+0.6
2,809,985	+				+0.5
2,809,986	-				+0.4
2,810,008	+				+2.0
2,810,008	+				-1.0
2,810,009	-				+0.5
2,810,009	-				-0.7
2,810,031	+				-0.9
2,810,031	+				+0.5
2,810,032	-				+2.6
2,810,119	+				-1.5
2,810,119	+				+0.0
2,810,119	+				-0.6
2,810,120	-				+2.2
2,810,120	-				+0.6
2,810,120	-				+1.6
2,810,120	-				-1.0
2,810,151	-				-2.2
2,810,151	-				+1.6
2,810,282	+		IAI47_13285	0.20	-1.2
2,810,283	-		IAI47_13285	0.20	-0.6
2,810,360	+		IAI47_13285	0.27	-1.7
2,810,360	+		IAI47_13285	0.27	-0.7
2,810,361	-		IAI47_13285	0.27	+2.7
2,810,406	-		IAI47_13285	0.31	-0.6
2,810,511	+		IAI47_13285	0.40	+0.7
2,810,512	-		IAI47_13285	0.40	+1.7
2,810,512	-		IAI47_13285	0.40	+0.4
2,810,559	-		IAI47_13285	0.44	-1.1
2,810,601	-		IAI47_13285	0.48	-0.1
2,810,601	-		IAI47_13285	0.48	+1.0
2,810,601	-		IAI47_13285	0.48	-2.5
2,810,613	-		IAI47_13285	0.49	+1.5
2,810,751	+		IAI47_13285	0.61	+0.8
2,810,751	+		IAI47_13285	0.61	-0.4
2,810,751	+		IAI47_13285	0.61	+1.9
2,810,752	-		IAI47_13285	0.61	+0.7
2,810,752	-		IAI47_13285	0.61	-0.4
2,810,789	+		IAI47_13285	0.64	-0.0
2,810,789	+		IAI47_13285	0.64	-0.3
2,810,789	+		IAI47_13285	0.64	+1.1
2,810,790	-		IAI47_13285	0.64	+0.5
2,810,790	-		IAI47_13285	0.64	+0.4
2,810,790	-		IAI47_13285	0.64	+0.4
2,810,790	-		IAI47_13285	0.64	+1.4
2,810,790	-		IAI47_13285	0.64	+0.8