Strain Fitness in Pantoea sp. MT58 around IAI47_17735

Experiment: Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
3,766,466	+				-0.5
3,766,467	-				+1.1
3,766,473	-				-1.2
3,766,473	-				+0.9
3,766,494	+				+1.1
3,766,494	+				+1.5
3,766,495	-				-1.5
3,766,495	-				+1.0
3,766,495	-				+1.8
3,766,495	-				+0.8
3,766,582	+				+0.3
3,766,582	+				+1.2
3,766,582	+				-1.2
3,766,618	+				+2.0
3,766,639	+				-0.4
3,766,639	+				-0.9
3,766,648	+				-1.4
3,766,648	+				-0.5
3,766,662	+				-0.6
3,766,663	-				+1.3
3,766,676	+				-0.7
3,766,676	+				+0.7
3,766,677	-				+0.1
3,766,677	-				-1.5
3,766,677	-				+0.2
3,766,684	+				+0.6
3,766,684	+				+0.4
3,766,684	+				+2.0
3,766,685	-				+0.2
3,766,685	-				+0.4
3,766,685	-				-1.8
3,766,738	+				+0.8
3,766,738	+				-0.4
3,766,739	-				-0.1
3,766,739	-				+1.0
3,766,739	-				+1.7
3,766,760	+				+5.1
3,766,761	-				+0.9
3,766,761	-				-1.1
3,766,761	-				+0.1
3,766,795	+		IAI47_17730	0.15	-0.3
3,766,796	-		IAI47_17730	0.15	-0.0
3,766,796	-		IAI47_17730	0.15	-0.9
3,766,796	-		IAI47_17730	0.15	-0.4
3,766,796	-		IAI47_17730	0.15	-0.8
3,766,796	-		IAI47_17730	0.15	+0.4
3,766,796	-		IAI47_17730	0.15	+0.7
3,766,796	-		IAI47_17730	0.15	+1.2
3,766,801	+		IAI47_17730	0.16	-0.5
3,766,817	+		IAI47_17730	0.19	-0.3
3,766,817	+		IAI47_17730	0.19	-0.9
3,766,818	-		IAI47_17730	0.19	-1.7
3,766,818	-		IAI47_17730	0.19	+3.0
3,766,864	+		IAI47_17730	0.28	+0.2
3,766,864	+		IAI47_17730	0.28	-0.2
3,766,864	+		IAI47_17730	0.28	-0.2
3,766,865	-		IAI47_17730	0.28	-0.3
3,766,865	-		IAI47_17730	0.28	-0.0
3,766,865	-		IAI47_17730	0.28	+0.1
3,766,900	+		IAI47_17730	0.34	+0.7
3,766,903	+		IAI47_17730	0.35	-0.0
3,766,903	+		IAI47_17730	0.35	-2.1
3,766,903	+		IAI47_17730	0.35	-0.3
3,766,903	+		IAI47_17730	0.35	+0.5
3,766,903	+		IAI47_17730	0.35	-1.4
3,766,903	+		IAI47_17730	0.35	-1.6
3,766,904	-		IAI47_17730	0.35	-0.1
3,766,904	-		IAI47_17730	0.35	-1.2
3,766,904	-		IAI47_17730	0.35	+0.7
3,766,904	-		IAI47_17730	0.35	-0.4
3,766,906	+		IAI47_17730	0.35	-0.2
3,766,906	+		IAI47_17730	0.35	-0.0
3,766,906	+		IAI47_17730	0.35	-0.7
3,766,906	+		IAI47_17730	0.35	-0.5
3,766,906	+		IAI47_17730	0.35	-1.3
3,766,907	-		IAI47_17730	0.36	-0.2
3,766,907	-		IAI47_17730	0.36	-2.0
3,766,915	+		IAI47_17730	0.37	+1.0
3,766,916	-		IAI47_17730	0.37	-0.7
3,766,916	-		IAI47_17730	0.37	+0.6
3,766,916	-		IAI47_17730	0.37	+1.6
3,766,916	-		IAI47_17730	0.37	-1.6
3,766,916	-		IAI47_17730	0.37	-0.7
3,766,942	+		IAI47_17730	0.42	-1.0
3,766,942	+		IAI47_17730	0.42	-0.0
3,766,942	+		IAI47_17730	0.42	+0.0
3,766,942	+		IAI47_17730	0.42	-0.5
3,766,942	+		IAI47_17730	0.42	+2.7
3,766,942	+		IAI47_17730	0.42	+0.1
3,766,942	+		IAI47_17730	0.42	-1.9
3,766,942	+		IAI47_17730	0.42	+0.1
3,766,943	-		IAI47_17730	0.42	-0.7
3,766,975	-		IAI47_17730	0.48	-0.7
3,767,053	+		IAI47_17730	0.62	-1.4
3,767,053	+		IAI47_17730	0.62	+0.4
3,767,053	+		IAI47_17730	0.62	-0.0
3,767,053	+		IAI47_17730	0.62	-0.8
3,767,071	+		IAI47_17730	0.66	-2.9
3,767,071	+		IAI47_17730	0.66	-1.2
3,767,071	+		IAI47_17730	0.66	+0.7
3,767,071	+		IAI47_17730	0.66	-1.0
3,767,071	+		IAI47_17730	0.66	+0.5
3,767,071	+		IAI47_17730	0.66	-0.3
3,767,071	+		IAI47_17730	0.66	+0.2
3,767,072	-		IAI47_17730	0.66	+0.2
3,767,094	-		IAI47_17730	0.70	-1.2
3,767,105	+		IAI47_17730	0.72	+1.8
3,767,106	-		IAI47_17730	0.72	+0.0
3,767,215	-				+1.0
3,767,215	-				-1.9
3,767,252	+				-1.9
3,767,252	+				+0.7
3,767,253	-				+1.0
3,767,253	-				+1.5
3,767,253	-				+2.0
3,767,282	+				-0.9
3,767,282	+				-2.1
3,767,282	+				-0.2
3,767,282	+				+1.0
3,767,283	-				+0.6
3,767,283	-				-0.3
3,767,283	-				+0.6
3,767,283	-				-0.0
3,767,283	-				+0.3
3,767,300	-				-0.3
3,767,340	+				-0.0
3,767,341	-				+0.7
3,767,344	+				+1.3
3,767,351	-				+0.2
3,767,351	-				-0.8
3,767,370	-				+2.9
3,767,395	+				-1.0
3,767,395	+				-0.8
3,767,395	+				+0.8
3,767,396	-				+0.1
3,767,396	-				-0.7
3,767,396	-				-0.2
3,767,396	-				+0.7
3,767,400	+				+1.7
3,767,400	+				+1.1
3,767,400	+				+1.8
3,767,400	+				-0.3
3,767,400	+				+1.4
3,767,400	+				-2.3
3,767,400	+				-1.4
3,767,400	+				+0.0
3,767,400	+				-0.5
3,767,400	+				+0.3
3,767,400	+				-0.4
3,767,400	+				+0.6
3,767,400	+				+1.1
3,767,400	+				-0.9
3,767,400	+				-0.1
3,767,400	+				+0.1
3,767,400	+				+2.2
3,767,400	+				-1.6
3,767,400	+				+1.2
3,767,400	+				-0.7
3,767,401	-				-1.0
3,767,401	-				-0.0
3,767,401	-				-0.8
3,767,401	-				-1.9
3,767,401	-				+1.5
3,767,401	-				+0.2
3,767,401	-				-0.8
3,767,401	-				-0.2
3,767,401	-				+0.0
3,767,401	-				+0.2
3,767,401	-				-0.7
3,767,401	-				+1.2
3,767,401	-				-1.2
3,767,401	-				+0.2
3,767,401	-				+1.1
3,767,401	-				+0.2
3,767,401	-				-0.8
3,767,401	-				+0.9
3,767,401	-				+0.1
3,767,401	-				-0.6
3,767,401	-				+0.5
3,767,401	-				+1.4
3,767,401	-				+0.7
3,767,401	-				+0.1
3,767,401	-				-0.3
3,767,401	-				+0.3
3,767,402	+				+1.3
3,767,402	+				+1.7
3,767,402	+				+1.7
3,767,402	+				+1.1
3,767,402	+				+1.2
3,767,402	+				-2.3
3,767,402	+				+0.5
3,767,402	+				+0.2
3,767,402	+				-0.2
3,767,402	+				+2.0
3,767,402	+				-1.0
3,767,402	+				-0.6
3,767,402	+				+1.7
3,767,402	+				+0.7
3,767,402	+				-1.8
3,767,403	-				+1.1
3,767,403	-				-2.3
3,767,403	-				+0.9
3,767,403	-				+0.1
3,767,403	-				-0.7
3,767,403	-				-0.9
3,767,403	-				-0.0
3,767,403	-				-1.6
3,767,403	-				-0.9
3,767,403	-				-0.5
3,767,403	-				-0.3
3,767,403	-				+0.7
3,767,403	-				-1.3
3,767,450	+				+0.3
3,767,451	-				+0.0
3,767,451	-				-2.2
3,767,451	-				-1.3
3,767,451	-				+1.7
3,767,607	-		IAI47_17735	0.30	-0.9
3,767,701	+		IAI47_17735	0.43	+0.3
3,767,702	-		IAI47_17735	0.44	-0.5
3,767,704	+		IAI47_17735	0.44	+0.2
3,767,704	+		IAI47_17735	0.44	-0.4
3,767,705	-		IAI47_17735	0.44	-0.1
3,767,705	-		IAI47_17735	0.44	+0.5
3,767,705	-		IAI47_17735	0.44	+0.4
3,767,705	-		IAI47_17735	0.44	-0.2
3,767,837	-		IAI47_17735	0.63	+0.6
3,767,837	-		IAI47_17735	0.63	-0.3
3,767,837	-		IAI47_17735	0.63	-1.2
3,767,837	-		IAI47_17735	0.63	-1.1
3,767,839	+		IAI47_17735	0.63	+0.1
3,767,839	+		IAI47_17735	0.63	-0.8
3,767,839	+		IAI47_17735	0.63	+1.6
3,767,839	+		IAI47_17735	0.63	+0.5
3,767,840	-		IAI47_17735	0.63	-0.2
3,767,840	-		IAI47_17735	0.63	-0.7
3,767,856	+		IAI47_17735	0.66	+0.2
3,767,856	+		IAI47_17735	0.66	-0.8
3,767,856	+		IAI47_17735	0.66	-1.2
3,767,857	-		IAI47_17735	0.66	+0.5
3,767,857	-		IAI47_17735	0.66	-0.5
3,767,857	-		IAI47_17735	0.66	-0.8
3,767,857	-		IAI47_17735	0.66	-1.8
3,767,882	-		IAI47_17735	0.69	-0.0
3,767,882	-		IAI47_17735	0.69	-0.2
3,767,925	+		IAI47_17735	0.76	+1.5
3,767,925	+		IAI47_17735	0.76	+0.7
3,767,926	-		IAI47_17735	0.76	-0.5
3,767,926	-		IAI47_17735	0.76	-1.0
3,767,926	-		IAI47_17735	0.76	+0.8
3,767,996	+		IAI47_17735	0.86	-1.0
3,767,996	+		IAI47_17735	0.86	-2.5
3,767,996	+		IAI47_17735	0.86	+2.0
3,768,019	+		IAI47_17735	0.89	+0.5
3,768,020	-		IAI47_17735	0.89	-0.8
3,768,020	-		IAI47_17735	0.89	-2.3
3,768,021	+		IAI47_17735	0.89	-0.4
3,768,021	+		IAI47_17735	0.89	-0.5
3,768,022	-		IAI47_17735	0.90	+0.5
3,768,031	+				-1.8
3,768,031	+				-1.0
3,768,032	-				-2.0
3,768,042	+				-0.9
3,768,042	+				+1.2
3,768,042	+				-0.2
3,768,042	+				+1.5
3,768,042	+				-1.3
3,768,042	+				+1.4
3,768,043	-				-1.7
3,768,043	-				+0.2
3,768,043	-				+0.5
3,768,043	-				+0.1
3,768,043	-				+0.9
3,768,043	-				-0.0
3,768,043	-				+0.3
3,768,043	-				+0.3
3,768,056	-				+1.3
3,768,056	-				+0.8
3,768,082	+				+1.8
3,768,082	+				-0.4
3,768,082	+				+0.1
3,768,083	-				-2.3
3,768,107	+				-1.7
3,768,107	+				-0.9
3,768,130	+		IAI47_17740	0.10	+0.3
3,768,130	+		IAI47_17740	0.10	+0.5
3,768,131	-		IAI47_17740	0.10	-1.8
3,768,131	-		IAI47_17740	0.10	-0.6
3,768,131	-		IAI47_17740	0.10	-1.8
3,768,136	+		IAI47_17740	0.12	-0.0
3,768,137	-		IAI47_17740	0.12	-0.6
3,768,137	-		IAI47_17740	0.12	-0.3
3,768,182	+		IAI47_17740	0.22	-0.6
3,768,238	+		IAI47_17740	0.35	+1.7
3,768,238	+		IAI47_17740	0.35	-2.0
3,768,238	+		IAI47_17740	0.35	+0.6
3,768,238	+		IAI47_17740	0.35	+1.6
3,768,238	+		IAI47_17740	0.35	-2.3
3,768,238	+		IAI47_17740	0.35	-1.5
3,768,239	-		IAI47_17740	0.36	+2.4
3,768,239	-		IAI47_17740	0.36	-2.2
3,768,312	+		IAI47_17740	0.53	+0.2
3,768,312	+		IAI47_17740	0.53	-0.5
3,768,312	+		IAI47_17740	0.53	+2.7
3,768,339	+		IAI47_17740	0.59	+0.7
3,768,340	-		IAI47_17740	0.59	+0.2
3,768,374	+		IAI47_17740	0.67	-0.5
3,768,374	+		IAI47_17740	0.67	-0.3
3,768,374	+		IAI47_17740	0.67	-0.0
3,768,437	+		IAI47_17740	0.82	+0.9
3,768,437	+		IAI47_17740	0.82	+0.1
3,768,437	+		IAI47_17740	0.82	+0.7
3,768,438	-		IAI47_17740	0.82	+0.2
3,768,438	-		IAI47_17740	0.82	+1.1
3,768,438	-		IAI47_17740	0.82	-1.3
3,768,438	-		IAI47_17740	0.82	-0.5
3,768,438	-		IAI47_17740	0.82	-0.0
3,768,438	-		IAI47_17740	0.82	-0.8
3,768,438	-		IAI47_17740	0.82	+0.6
3,768,438	-		IAI47_17740	0.82	+1.3
3,768,438	-		IAI47_17740	0.82	+1.1
3,768,438	-		IAI47_17740	0.82	-1.4
3,768,438	-		IAI47_17740	0.82	-0.2
3,768,439	+		IAI47_17740	0.83	+1.1
3,768,439	+		IAI47_17740	0.83	-2.4
3,768,439	+		IAI47_17740	0.83	+0.2
3,768,439	+		IAI47_17740	0.83	+1.8
3,768,439	+		IAI47_17740	0.83	+0.3
3,768,439	+		IAI47_17740	0.83	-1.1
3,768,439	+		IAI47_17740	0.83	-0.5
3,768,439	+		IAI47_17740	0.83	-2.8
3,768,439	+		IAI47_17740	0.83	-0.6
3,768,439	+		IAI47_17740	0.83	+0.4
3,768,439	+		IAI47_17740	0.83	+0.3
3,768,439	+		IAI47_17740	0.83	+1.4
3,768,439	+		IAI47_17740	0.83	-0.3
3,768,439	+		IAI47_17740	0.83	+1.2
3,768,439	+		IAI47_17740	0.83	-0.9
3,768,439	+		IAI47_17740	0.83	-0.3
3,768,439	+		IAI47_17740	0.83	-0.5
3,768,439	+		IAI47_17740	0.83	+0.8
3,768,440	-		IAI47_17740	0.83	-2.0
3,768,440	-		IAI47_17740	0.83	-1.0
3,768,440	-		IAI47_17740	0.83	-0.8
3,768,440	-		IAI47_17740	0.83	-1.2
3,768,440	-		IAI47_17740	0.83	-0.7
3,768,440	-		IAI47_17740	0.83	-2.8
3,768,440	-		IAI47_17740	0.83	-1.6
3,768,440	-		IAI47_17740	0.83	+0.4
3,768,440	-		IAI47_17740	0.83	-2.0
3,768,440	-		IAI47_17740	0.83	-1.5
3,768,440	-		IAI47_17740	0.83	+0.2
3,768,440	-		IAI47_17740	0.83	+0.1
3,768,440	-		IAI47_17740	0.83	+0.5
3,768,440	-		IAI47_17740	0.83	+1.5
3,768,440	-		IAI47_17740	0.83	+0.7
3,768,441	+		IAI47_17740	0.83	+0.5
3,768,441	+		IAI47_17740	0.83	-0.7
3,768,441	+		IAI47_17740	0.83	-0.7
3,768,441	+		IAI47_17740	0.83	+2.4
3,768,441	+		IAI47_17740	0.83	+2.6
3,768,441	+		IAI47_17740	0.83	+0.8
3,768,441	+		IAI47_17740	0.83	+0.2
3,768,441	+		IAI47_17740	0.83	+1.3
3,768,441	+		IAI47_17740	0.83	-1.4
3,768,441	+		IAI47_17740	0.83	+2.0
3,768,441	+		IAI47_17740	0.83	+0.2
3,768,441	+		IAI47_17740	0.83	+2.1
3,768,441	+		IAI47_17740	0.83	+2.4
3,768,441	+		IAI47_17740	0.83	+0.2
3,768,441	+		IAI47_17740	0.83	-0.7
3,768,441	+		IAI47_17740	0.83	+0.3
3,768,441	+		IAI47_17740	0.83	-1.2
3,768,441	+		IAI47_17740	0.83	-0.2
3,768,442	-		IAI47_17740	0.83	-1.3
3,768,442	-		IAI47_17740	0.83	+0.1
3,768,442	-		IAI47_17740	0.83	+0.6
3,768,442	-		IAI47_17740	0.83	+0.1
3,768,442	-		IAI47_17740	0.83	+0.4
3,768,442	-		IAI47_17740	0.83	+0.8
3,768,442	-		IAI47_17740	0.83	+0.5
3,768,447	+		IAI47_17740	0.85	+0.6
3,768,448	-		IAI47_17740	0.85	-1.5
3,768,448	-		IAI47_17740	0.85	+0.3
3,768,448	-		IAI47_17740	0.85	+1.2
3,768,465	-		IAI47_17740	0.89	+0.3
3,768,465	-		IAI47_17740	0.89	+0.8
3,768,505	-				-1.5
3,768,505	-				+1.4
3,768,531	-				+2.1
3,768,531	-				+0.4
3,768,531	-				-0.4
3,768,547	+				+0.9
3,768,548	-				+1.4
3,768,549	+				-0.1
3,768,549	+				-0.4
3,768,549	+				-1.3
3,768,550	-				+0.5
3,768,581	+				-1.7
3,768,593	-				+1.8
3,768,593	-				-2.1
3,768,611	+				+0.9
3,768,612	-				-0.2
3,768,615	+				+0.7
3,768,615	+				+1.7
3,768,637	+				+0.2
3,768,637	+				+0.6
3,768,637	+				-0.2
3,768,638	-				-0.4
3,768,642	+				-1.1
3,768,750	+		IAI47_17745	0.15	-0.2
3,768,750	+		IAI47_17745	0.15	-0.0
3,768,751	-		IAI47_17745	0.15	-0.1
3,768,751	-		IAI47_17745	0.15	+0.7
3,768,786	+		IAI47_17745	0.19	+1.5
3,768,787	-		IAI47_17745	0.19	-2.4
3,768,808	+		IAI47_17745	0.21	-0.7
3,768,808	+		IAI47_17745	0.21	-0.7
3,768,809	-		IAI47_17745	0.21	+1.5
3,768,809	-		IAI47_17745	0.21	+0.3
3,768,879	+		IAI47_17745	0.29	+0.7
3,768,879	+		IAI47_17745	0.29	+0.5
3,768,929	+		IAI47_17745	0.35	+0.8
3,768,929	+		IAI47_17745	0.35	-1.3
3,768,929	+		IAI47_17745	0.35	-0.9