Strain Fitness in Pantoea sp. MT58 around IAI47_13805

Experiment: Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
2,922,353	+				+1.1
2,922,353	+				-0.3
2,922,354	-				+0.1
2,922,354	-				+0.4
2,922,354	-				+0.7
2,922,394	+		IAI47_13800	0.14	-1.4
2,922,394	+		IAI47_13800	0.14	+0.9
2,922,395	-		IAI47_13800	0.14	+0.0
2,922,462	+		IAI47_13800	0.21	+0.7
2,922,462	+		IAI47_13800	0.21	+0.4
2,922,462	+		IAI47_13800	0.21	-0.5
2,922,462	+		IAI47_13800	0.21	-1.7
2,922,462	+		IAI47_13800	0.21	+0.7
2,922,462	+		IAI47_13800	0.21	-0.8
2,922,462	+		IAI47_13800	0.21	-0.5
2,922,462	+		IAI47_13800	0.21	+0.5
2,922,462	+		IAI47_13800	0.21	+1.0
2,922,463	-		IAI47_13800	0.21	+2.5
2,922,463	-		IAI47_13800	0.21	-0.4
2,922,463	-		IAI47_13800	0.21	-0.6
2,922,463	-		IAI47_13800	0.21	-0.0
2,922,463	-		IAI47_13800	0.21	-1.9
2,922,463	-		IAI47_13800	0.21	+0.1
2,922,463	-		IAI47_13800	0.21	+0.9
2,922,545	+		IAI47_13800	0.30	+1.0
2,922,546	-		IAI47_13800	0.30	+0.1
2,922,546	-		IAI47_13800	0.30	-2.1
2,922,649	+		IAI47_13800	0.41	-1.5
2,922,650	-		IAI47_13800	0.42	-1.9
2,922,650	-		IAI47_13800	0.42	-1.0
2,922,699	+		IAI47_13800	0.47	+1.4
2,922,859	+		IAI47_13800	0.64	+0.2
2,922,860	-		IAI47_13800	0.64	-1.1
2,922,860	-		IAI47_13800	0.64	+0.1
2,922,860	-		IAI47_13800	0.64	+1.2
2,922,860	-		IAI47_13800	0.64	-0.9
2,922,869	+		IAI47_13800	0.65	+1.3
2,922,870	-		IAI47_13800	0.65	-0.5
2,922,870	-		IAI47_13800	0.65	+0.9
2,922,870	-		IAI47_13800	0.65	+0.8
2,922,870	-		IAI47_13800	0.65	+0.1
2,923,062	+		IAI47_13800	0.86	+0.3
2,923,068	+		IAI47_13800	0.86	+1.3
2,923,068	+		IAI47_13800	0.86	+0.1
2,923,069	-		IAI47_13800	0.87	-0.3
2,923,069	-		IAI47_13800	0.87	+0.7
2,923,093	+		IAI47_13800	0.89	+1.5
2,923,118	+				+0.5
2,923,138	+				+0.2
2,923,188	+				-0.1
2,923,193	+				+0.5
2,923,193	+				+0.3
2,923,193	+				+0.2
2,923,193	+				+1.6
2,923,193	+				+1.1
2,923,193	+				+0.7
2,923,193	+				-0.1
2,923,193	+				+0.8
2,923,193	+				-1.2
2,923,194	-				+2.9
2,923,194	-				-1.6
2,923,194	-				+0.2
2,923,194	-				+0.6
2,923,327	-		IAI47_13805	0.21	+0.3
2,923,327	-		IAI47_13805	0.21	-0.5
2,923,327	-		IAI47_13805	0.21	+3.4
2,923,470	+		IAI47_13805	0.43	+1.3
2,923,470	+		IAI47_13805	0.43	-0.9
2,923,470	+		IAI47_13805	0.43	+0.4
2,923,471	-		IAI47_13805	0.43	+1.1
2,923,563	+		IAI47_13805	0.57	+3.9
2,923,563	+		IAI47_13805	0.57	-0.1
2,923,564	-		IAI47_13805	0.57	-1.4
2,923,581	-		IAI47_13805	0.60	-0.1
2,923,598	+		IAI47_13805	0.63	+0.7
2,923,598	+		IAI47_13805	0.63	+1.1
2,923,598	+		IAI47_13805	0.63	-0.1
2,923,599	-		IAI47_13805	0.63	-0.9
2,923,744	+		IAI47_13805	0.85	-2.1
2,923,744	+		IAI47_13805	0.85	-1.1
2,923,744	+		IAI47_13805	0.85	-0.9
2,923,745	-		IAI47_13805	0.85	+2.3
2,923,745	-		IAI47_13805	0.85	-1.6
2,923,745	-		IAI47_13805	0.85	+0.5
2,923,745	-		IAI47_13805	0.85	-0.9
2,923,745	-		IAI47_13805	0.85	+1.6
2,923,756	+		IAI47_13805	0.87	-0.1
2,923,756	+		IAI47_13805	0.87	-0.1
2,923,756	+		IAI47_13805	0.87	-0.4
2,923,757	-		IAI47_13805	0.87	-0.5
2,923,757	-		IAI47_13805	0.87	-0.0
2,923,757	-		IAI47_13805	0.87	+0.7
2,923,821	-				-0.8
2,923,821	-				-0.4
2,923,824	+				-0.9
2,923,825	-				-0.2
2,923,848	+				+1.5
2,923,848	+				-0.5
2,923,913	+				-1.3
2,923,913	+				+1.1
2,923,913	+				-0.3
2,923,913	+				+0.3
2,923,914	-				-1.3
2,923,917	+				-1.2
2,923,917	+				+0.9
2,923,917	+				-1.7
2,923,918	-				-0.9
2,923,918	-				-0.5
2,923,921	+				-0.5
2,923,921	+				+1.1
2,923,921	+				-0.5
2,923,930	+				-2.1
2,923,930	+				-0.9
2,923,930	+				+0.6
2,923,930	+				+1.9
2,923,930	+				-0.5
2,923,930	+				-1.1
2,923,930	+				+0.7
2,923,931	-				-2.2
2,923,931	-				+0.8
2,923,931	-				-1.4
2,923,962	-				+0.5
2,923,964	-				-0.3
2,923,968	-				-1.9
2,923,968	-				+1.3
2,923,968	-				+1.1
2,923,968	-				+1.2
2,924,021	+				-1.3
2,924,021	+				+2.8
2,924,021	+				+1.4
2,924,021	+				+0.1
2,924,022	-				-0.7
2,924,024	-				-0.0
2,924,080	-		IAI47_13810	0.10	-0.4
2,924,177	+		IAI47_13810	0.23	-1.1
2,924,177	+		IAI47_13810	0.23	-0.7
2,924,177	+		IAI47_13810	0.23	-0.1
2,924,177	+		IAI47_13810	0.23	-1.2
2,924,177	+		IAI47_13810	0.23	-1.1
2,924,178	-		IAI47_13810	0.23	+0.2
2,924,178	-		IAI47_13810	0.23	-0.3
2,924,178	-		IAI47_13810	0.23	-0.7
2,924,179	+		IAI47_13810	0.24	+1.5
2,924,179	+		IAI47_13810	0.24	-0.4
2,924,179	+		IAI47_13810	0.24	+0.5
2,924,179	+		IAI47_13810	0.24	-0.9
2,924,179	+		IAI47_13810	0.24	-1.4
2,924,179	+		IAI47_13810	0.24	+1.6
2,924,179	+		IAI47_13810	0.24	-0.6
2,924,179	+		IAI47_13810	0.24	+2.1
2,924,179	+		IAI47_13810	0.24	+0.1
2,924,179	+		IAI47_13810	0.24	-0.8
2,924,179	+		IAI47_13810	0.24	-2.3
2,924,179	+		IAI47_13810	0.24	-0.7
2,924,179	+		IAI47_13810	0.24	-0.1
2,924,179	+		IAI47_13810	0.24	-0.0
2,924,180	-		IAI47_13810	0.24	+0.4
2,924,180	-		IAI47_13810	0.24	+0.3
2,924,180	-		IAI47_13810	0.24	-0.0
2,924,180	-		IAI47_13810	0.24	-0.4
2,924,180	-		IAI47_13810	0.24	+0.5
2,924,180	-		IAI47_13810	0.24	-0.4
2,924,180	-		IAI47_13810	0.24	-2.1
2,924,180	-		IAI47_13810	0.24	-1.1
2,924,180	-		IAI47_13810	0.24	-1.1
2,924,180	-		IAI47_13810	0.24	+3.1
2,924,180	-		IAI47_13810	0.24	+1.5
2,924,180	-		IAI47_13810	0.24	+0.0
2,924,180	-		IAI47_13810	0.24	-0.2
2,924,180	-		IAI47_13810	0.24	-1.3
2,924,180	-		IAI47_13810	0.24	+0.2
2,924,180	-		IAI47_13810	0.24	-0.4
2,924,180	-		IAI47_13810	0.24	-0.0
2,924,180	-		IAI47_13810	0.24	-2.2
2,924,180	-		IAI47_13810	0.24	-0.6
2,924,247	-		IAI47_13810	0.33	-0.5
2,924,388	+		IAI47_13810	0.52	-1.0
2,924,388	+		IAI47_13810	0.52	+0.3
2,924,388	+		IAI47_13810	0.52	+2.1
2,924,389	-		IAI47_13810	0.52	+0.1
2,924,396	+		IAI47_13810	0.53	+1.0
2,924,396	+		IAI47_13810	0.53	-2.2
2,924,397	-		IAI47_13810	0.53	+1.5
2,924,467	+		IAI47_13810	0.62	+0.6
2,924,467	+		IAI47_13810	0.62	+1.5
2,924,468	-		IAI47_13810	0.62	+0.2
2,924,468	-		IAI47_13810	0.62	+0.4
2,924,468	-		IAI47_13810	0.62	+1.1
2,924,474	+		IAI47_13810	0.63	-0.0
2,924,474	+		IAI47_13810	0.63	-0.9
2,924,474	+		IAI47_13810	0.63	+0.0
2,924,474	+		IAI47_13810	0.63	+0.7
2,924,475	-		IAI47_13810	0.63	+0.3
2,924,477	+		IAI47_13810	0.64	+0.1
2,924,477	+		IAI47_13810	0.64	+1.7
2,924,477	+		IAI47_13810	0.64	-1.5
2,924,477	+		IAI47_13810	0.64	-1.4
2,924,477	+		IAI47_13810	0.64	+0.7
2,924,477	+		IAI47_13810	0.64	-0.5
2,924,478	-		IAI47_13810	0.64	+0.1
2,924,478	-		IAI47_13810	0.64	+0.2
2,924,478	-		IAI47_13810	0.64	+1.6
2,924,478	-		IAI47_13810	0.64	+3.4
2,924,478	-		IAI47_13810	0.64	+1.3
2,924,478	-		IAI47_13810	0.64	+0.6
2,924,478	-		IAI47_13810	0.64	-1.3
2,924,516	+		IAI47_13810	0.69	-1.0
2,924,516	+		IAI47_13810	0.69	-1.2
2,924,516	+		IAI47_13810	0.69	+2.2
2,924,517	-		IAI47_13810	0.69	+1.0
2,924,517	-		IAI47_13810	0.69	+0.5
2,924,517	-		IAI47_13810	0.69	-1.6
2,924,517	-		IAI47_13810	0.69	+0.2
2,924,517	-		IAI47_13810	0.69	-1.8
2,924,517	-		IAI47_13810	0.69	+0.9
2,924,522	+		IAI47_13810	0.70	+2.4
2,924,522	+		IAI47_13810	0.70	-1.2
2,924,523	-		IAI47_13810	0.70	+0.2
2,924,551	+		IAI47_13810	0.74	+1.7
2,924,552	-		IAI47_13810	0.74	-0.0
2,924,567	+		IAI47_13810	0.76	+1.3
2,924,567	+		IAI47_13810	0.76	+2.6
2,924,568	-		IAI47_13810	0.76	+0.6
2,924,568	-		IAI47_13810	0.76	-0.3
2,924,634	-		IAI47_13810	0.85	+0.1
2,924,683	+				-0.5
2,924,799	+				+0.9
2,924,799	+				+0.6
2,924,799	+				+0.1
2,924,799	+				-0.1
2,924,800	-				+1.0
2,924,800	-				+0.9
2,924,800	-				+1.6
2,924,800	-				-1.8
2,924,800	-				+0.1
2,924,800	-				-0.5
2,924,800	-				+1.4
2,924,800	-				+1.3
2,924,800	-				+0.4
2,924,800	-				-1.3
2,924,822	+				+0.9
2,924,822	+				-0.7
2,924,823	-				+0.4