Strain Fitness in Pantoea sp. MT58 around IAI47_12745

Experiment: Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
2,680,944	+		IAI47_12735	0.86	+0.4
2,680,944	+		IAI47_12735	0.86	-0.1
2,680,944	+		IAI47_12735	0.86	+2.3
2,680,945	-		IAI47_12735	0.86	-0.4
2,680,952	-		IAI47_12735	0.87	+0.4
2,680,992	-				+0.9
2,681,121	+				+3.4
2,681,121	+				+0.6
2,681,122	-				+1.4
2,681,122	-				+1.3
2,681,122	-				+0.7
2,681,137	+		IAI47_12740	0.11	+1.8
2,681,137	+		IAI47_12740	0.11	+0.4
2,681,137	+		IAI47_12740	0.11	+2.4
2,681,138	-		IAI47_12740	0.11	-0.4
2,681,138	-		IAI47_12740	0.11	+0.1
2,681,144	+		IAI47_12740	0.12	+1.9
2,681,144	+		IAI47_12740	0.12	-0.4
2,681,159	+		IAI47_12740	0.14	+0.6
2,681,159	+		IAI47_12740	0.14	-0.6
2,681,160	-		IAI47_12740	0.14	+1.2
2,681,304	-		IAI47_12740	0.32	-0.7
2,681,423	-		IAI47_12740	0.47	+1.4
2,681,616	-		IAI47_12740	0.72	+0.4
2,681,616	-		IAI47_12740	0.72	+0.6
2,681,616	-		IAI47_12740	0.72	-1.1
2,681,616	-		IAI47_12740	0.72	-1.5
2,681,773	+				-1.1
2,681,774	-				-0.5
2,681,840	+				-0.2
2,681,874	-				+1.1
2,681,881	+				+0.1
2,681,882	-				+0.2
2,681,882	-				+0.8
2,681,882	-				-0.7
2,681,882	-				-0.1
2,681,882	-				+0.4
2,681,894	+				+0.1
2,681,894	+				+0.6
2,681,894	+				+0.5
2,681,894	+				+0.1
2,681,894	+				-1.2
2,681,895	-				+2.1
2,681,895	-				-1.1
2,681,895	-				+0.1
2,681,895	-				-0.9
2,681,895	-				-0.6
2,681,895	-				-0.9
2,681,942	+				+2.4
2,681,961	+				+0.1
2,682,021	-				+0.0
2,682,046	+				+0.1
2,682,047	-				+0.4
2,682,047	-				+0.1
2,682,111	+				-0.0
2,682,111	+				+1.3
2,682,111	+				-1.1
2,682,111	+				+1.6
2,682,112	-				-0.3
2,682,112	-				-2.4
2,682,112	-				+1.4
2,682,112	-				-0.2
2,682,114	-				-0.6
2,682,195	+		IAI47_12745	0.11	+0.1
2,682,195	+		IAI47_12745	0.11	+0.5
2,682,196	-		IAI47_12745	0.11	-0.2
2,682,204	+		IAI47_12745	0.11	+0.9
2,682,204	+		IAI47_12745	0.11	+0.0
2,682,204	+		IAI47_12745	0.11	+0.0
2,682,204	+		IAI47_12745	0.11	-0.0
2,682,205	-		IAI47_12745	0.11	-2.5
2,682,205	-		IAI47_12745	0.11	-0.6
2,682,237	+		IAI47_12745	0.12	+0.4
2,682,237	+		IAI47_12745	0.12	+0.2
2,682,237	+		IAI47_12745	0.12	+0.6
2,682,238	-		IAI47_12745	0.12	-1.1
2,682,238	-		IAI47_12745	0.12	+3.1
2,682,238	-		IAI47_12745	0.12	+0.4
2,682,323	+		IAI47_12745	0.16	+0.7
2,682,416	+		IAI47_12745	0.19	-0.1
2,682,428	-		IAI47_12745	0.20	-1.4
2,682,428	-		IAI47_12745	0.20	-1.6
2,682,467	+		IAI47_12745	0.21	-0.3
2,682,467	+		IAI47_12745	0.21	+0.8
2,682,468	-		IAI47_12745	0.21	+0.9
2,682,468	-		IAI47_12745	0.21	-0.4
2,682,480	+		IAI47_12745	0.22	+0.1
2,682,481	-		IAI47_12745	0.22	+2.2
2,682,481	-		IAI47_12745	0.22	+0.5
2,682,548	+		IAI47_12745	0.24	-1.6
2,682,548	+		IAI47_12745	0.24	-0.8
2,682,548	+		IAI47_12745	0.24	+1.6
2,682,549	-		IAI47_12745	0.24	-1.6
2,682,718	+		IAI47_12745	0.31	-0.2
2,682,718	+		IAI47_12745	0.31	+0.1
2,682,718	+		IAI47_12745	0.31	+0.8
2,682,719	-		IAI47_12745	0.31	+0.2
2,682,719	-		IAI47_12745	0.31	-2.0
2,682,721	+		IAI47_12745	0.31	-1.3
2,682,721	+		IAI47_12745	0.31	+2.4
2,682,722	-		IAI47_12745	0.31	-1.5
2,682,722	-		IAI47_12745	0.31	+0.8
2,682,779	+		IAI47_12745	0.33	+0.0
2,682,779	+		IAI47_12745	0.33	-0.6
2,682,803	+		IAI47_12745	0.34	+1.3
2,682,803	+		IAI47_12745	0.34	-1.3
2,682,803	+		IAI47_12745	0.34	+0.1
2,682,803	+		IAI47_12745	0.34	+0.7
2,682,804	-		IAI47_12745	0.34	+0.2
2,682,804	-		IAI47_12745	0.34	-0.8
2,682,894	+		IAI47_12745	0.38	+0.4
2,682,894	+		IAI47_12745	0.38	-0.2
2,682,894	+		IAI47_12745	0.38	+0.7
2,682,894	+		IAI47_12745	0.38	+0.8
2,682,894	+		IAI47_12745	0.38	-0.5
2,682,895	-		IAI47_12745	0.38	-2.5
2,682,895	-		IAI47_12745	0.38	+0.8
2,682,895	-		IAI47_12745	0.38	+0.5
2,682,897	-		IAI47_12745	0.38	+0.6
2,682,953	+		IAI47_12745	0.40	-0.5
2,682,953	+		IAI47_12745	0.40	+0.8
2,682,953	+		IAI47_12745	0.40	-1.9
2,682,953	+		IAI47_12745	0.40	-0.1
2,682,954	-		IAI47_12745	0.40	-1.8
2,682,969	+		IAI47_12745	0.40	-1.5
2,682,970	-		IAI47_12745	0.40	+0.1
2,683,058	+		IAI47_12745	0.44	-0.5
2,683,058	+		IAI47_12745	0.44	-0.6
2,683,058	+		IAI47_12745	0.44	-0.2
2,683,058	+		IAI47_12745	0.44	-1.0
2,683,059	-		IAI47_12745	0.44	+1.2
2,683,059	-		IAI47_12745	0.44	+1.1
2,683,059	-		IAI47_12745	0.44	+0.8
2,683,068	+		IAI47_12745	0.44	-0.4
2,683,080	+		IAI47_12745	0.45	+0.8
2,683,081	-		IAI47_12745	0.45	+0.3
2,683,139	-		IAI47_12745	0.47	+0.3
2,683,139	-		IAI47_12745	0.47	+1.4
2,683,145	+		IAI47_12745	0.47	+0.9
2,683,145	+		IAI47_12745	0.47	-0.3
2,683,145	+		IAI47_12745	0.47	-1.7
2,683,145	+		IAI47_12745	0.47	+0.1
2,683,146	-		IAI47_12745	0.47	-0.9
2,683,146	-		IAI47_12745	0.47	-0.6
2,683,146	-		IAI47_12745	0.47	-0.6
2,683,146	-		IAI47_12745	0.47	-0.1
2,683,146	-		IAI47_12745	0.47	-1.0
2,683,166	+		IAI47_12745	0.48	-0.6
2,683,166	+		IAI47_12745	0.48	+1.2
2,683,209	-		IAI47_12745	0.50	+0.7
2,683,308	-		IAI47_12745	0.53	-0.6
2,683,308	-		IAI47_12745	0.53	+1.6
2,683,308	-		IAI47_12745	0.53	-0.3
2,683,350	+		IAI47_12745	0.55	-1.2
2,683,350	+		IAI47_12745	0.55	+0.7
2,683,351	-		IAI47_12745	0.55	+1.4
2,683,351	-		IAI47_12745	0.55	+0.4
2,683,351	-		IAI47_12745	0.55	+0.6
2,683,351	-		IAI47_12745	0.55	-0.2
2,683,359	+		IAI47_12745	0.55	+0.4
2,683,359	+		IAI47_12745	0.55	+2.4
2,683,359	+		IAI47_12745	0.55	+0.6
2,683,360	-		IAI47_12745	0.55	+0.2
2,683,360	-		IAI47_12745	0.55	+0.1
2,683,385	+		IAI47_12745	0.56	+0.4
2,683,385	+		IAI47_12745	0.56	-0.1
2,683,385	+		IAI47_12745	0.56	+1.1
2,683,385	+		IAI47_12745	0.56	+0.8
2,683,385	+		IAI47_12745	0.56	-0.5
2,683,386	-		IAI47_12745	0.56	-0.7
2,683,400	+		IAI47_12745	0.57	-0.2
2,683,401	-		IAI47_12745	0.57	-0.5
2,683,488	+		IAI47_12745	0.60	+0.1
2,683,489	-		IAI47_12745	0.60	-0.9
2,683,489	-		IAI47_12745	0.60	+1.3
2,683,632	-		IAI47_12745	0.66	-0.8
2,683,632	-		IAI47_12745	0.66	+0.1
2,683,632	-		IAI47_12745	0.66	-0.8
2,683,664	+		IAI47_12745	0.67	-0.8
2,683,664	+		IAI47_12745	0.67	+0.7
2,683,664	+		IAI47_12745	0.67	+1.1
2,683,665	-		IAI47_12745	0.67	+0.8
2,683,699	+		IAI47_12745	0.68	-0.3
2,683,699	+		IAI47_12745	0.68	+0.5
2,683,699	+		IAI47_12745	0.68	+1.7
2,683,699	+		IAI47_12745	0.68	+0.0
2,683,703	+		IAI47_12745	0.69	-1.5
2,683,703	+		IAI47_12745	0.69	+0.2
2,683,703	+		IAI47_12745	0.69	-1.4
2,683,703	+		IAI47_12745	0.69	-0.2
2,683,703	+		IAI47_12745	0.69	+0.8
2,683,703	+		IAI47_12745	0.69	+0.4
2,683,704	-		IAI47_12745	0.69	-0.9
2,683,704	-		IAI47_12745	0.69	-0.6
2,683,704	-		IAI47_12745	0.69	-0.8
2,683,731	+		IAI47_12745	0.70	+0.8
2,683,731	+		IAI47_12745	0.70	-0.4
2,683,731	+		IAI47_12745	0.70	-0.9
2,683,732	-		IAI47_12745	0.70	+2.1
2,683,776	+		IAI47_12745	0.71	-0.2
2,683,776	+		IAI47_12745	0.71	+0.1
2,683,776	+		IAI47_12745	0.71	+2.4
2,683,776	+		IAI47_12745	0.71	-0.8
2,683,777	-		IAI47_12745	0.71	+2.7
2,683,777	-		IAI47_12745	0.71	+2.5
2,683,793	+		IAI47_12745	0.72	+0.1
2,683,793	+		IAI47_12745	0.72	+2.9
2,683,793	+		IAI47_12745	0.72	-0.6
2,683,793	+		IAI47_12745	0.72	+3.0
2,683,793	+		IAI47_12745	0.72	-1.3
2,683,793	+		IAI47_12745	0.72	+0.2
2,683,794	-		IAI47_12745	0.72	+1.9
2,683,794	-		IAI47_12745	0.72	-2.5
2,683,794	-		IAI47_12745	0.72	-0.7
2,683,872	+		IAI47_12745	0.75	+0.6
2,683,872	+		IAI47_12745	0.75	+0.1
2,683,923	+		IAI47_12745	0.77	+0.2
2,683,924	-		IAI47_12745	0.77	-1.5
2,683,924	-		IAI47_12745	0.77	+2.3
2,683,973	+		IAI47_12745	0.79	+1.7
2,683,973	+		IAI47_12745	0.79	+1.1
2,683,973	+		IAI47_12745	0.79	+1.4
2,684,090	+		IAI47_12745	0.83	+1.5
2,684,090	+		IAI47_12745	0.83	+0.0
2,684,090	+		IAI47_12745	0.83	+1.0
2,684,090	+		IAI47_12745	0.83	-1.2
2,684,090	+		IAI47_12745	0.83	+1.3
2,684,091	-		IAI47_12745	0.83	+3.2
2,684,091	-		IAI47_12745	0.83	+0.8
2,684,091	-		IAI47_12745	0.83	+1.0
2,684,091	-		IAI47_12745	0.83	-0.9
2,684,104	-		IAI47_12745	0.84	-2.1
2,684,135	+		IAI47_12745	0.85	+0.7
2,684,135	+		IAI47_12745	0.85	+1.7
2,684,136	-		IAI47_12745	0.85	+1.3
2,684,136	-		IAI47_12745	0.85	-0.1
2,684,136	-		IAI47_12745	0.85	+0.2
2,684,142	+		IAI47_12745	0.85	+0.5
2,684,142	+		IAI47_12745	0.85	-0.3
2,684,142	+		IAI47_12745	0.85	+1.3
2,684,142	+		IAI47_12745	0.85	+1.7
2,684,142	+		IAI47_12745	0.85	+2.5
2,684,142	+		IAI47_12745	0.85	+0.5
2,684,142	+		IAI47_12745	0.85	+0.1
2,684,143	-		IAI47_12745	0.85	+0.7
2,684,143	-		IAI47_12745	0.85	+0.8
2,684,143	-		IAI47_12745	0.85	-0.4
2,684,143	-		IAI47_12745	0.85	+1.0
2,684,143	-		IAI47_12745	0.85	+0.5
2,684,143	-		IAI47_12745	0.85	-0.0
2,684,143	-		IAI47_12745	0.85	-0.2
2,684,143	-		IAI47_12745	0.85	+1.4
2,684,143	-		IAI47_12745	0.85	-0.2
2,684,145	+		IAI47_12745	0.85	+1.4
2,684,146	-		IAI47_12745	0.85	-0.4
2,684,146	-		IAI47_12745	0.85	+0.1
2,684,199	-		IAI47_12745	0.87	+1.1
2,684,199	-		IAI47_12745	0.87	+0.1
2,684,235	+		IAI47_12745	0.89	-0.1
2,684,235	+		IAI47_12745	0.89	+1.5
2,684,235	+		IAI47_12745	0.89	+0.8
2,684,236	-		IAI47_12745	0.89	+0.0
2,684,236	-		IAI47_12745	0.89	+0.9
2,684,236	-		IAI47_12745	0.89	+1.6
2,684,236	-		IAI47_12745	0.89	+3.5
2,684,350	+				+0.3
2,684,401	-				+0.5
2,684,418	+				-0.2
2,684,453	-				-0.6
2,684,453	-				+0.5
2,684,474	+				+0.1
2,684,474	+				-0.9
2,684,474	+				-0.3
2,684,474	+				-1.4
2,684,474	+				-0.8
2,684,475	-				-1.1
2,684,475	-				-1.2
2,684,475	-				+0.8
2,684,489	+				-0.4
2,684,501	+				+0.5
2,684,501	+				+0.2
2,684,501	+				+0.4
2,684,502	-				+0.9
2,684,502	-				-1.1
2,684,526	+				-1.0
2,684,527	-				-1.0
2,684,527	-				+0.1
2,684,527	-				+0.1
2,684,527	-				+0.3
2,684,527	-				-0.5
2,684,527	-				-1.6
2,684,527	-				+2.0
2,684,544	+				+1.0
2,684,544	+				+0.1
2,684,544	+				+1.5
2,684,545	-				-0.1
2,684,546	+				+2.7
2,684,547	-				+0.2
2,684,547	-				-1.0
2,684,547	-				-1.5
2,684,547	-				+0.2
2,684,552	+				-0.8
2,684,565	+				+0.5
2,684,566	-				+0.1
2,684,566	-				+0.1
2,684,574	+				+0.7
2,684,575	-				+1.4
2,684,575	-				+0.1
2,684,577	+				-1.0
2,684,577	+				-0.5
2,684,577	+				-0.5
2,684,577	+				+1.9
2,684,577	+				+2.7
2,684,577	+				-0.6
2,684,604	-				-0.2
2,684,604	-				-1.1
2,684,620	-				+1.2
2,684,630	-				-0.4
2,684,669	+				-0.4
2,684,670	-				+0.7
2,684,670	-				+1.1
2,684,670	-				+0.7
2,684,670	-				+0.5
2,684,670	-				+1.3
2,684,670	-				-0.7
2,684,670	-				-0.1
2,684,691	-				+1.3
2,684,698	+				+0.0
2,684,698	+				-1.5
2,684,698	+				-0.7
2,684,698	+				-0.8
2,684,699	-				-0.3
2,684,701	-				+0.3
2,684,714	+				-0.0
2,684,715	-				-1.1
2,684,715	-				-0.9
2,684,724	+				-1.5
2,684,724	+				+0.1
2,684,724	+				+1.2
2,684,724	+				-0.0
2,684,724	+				-1.2
2,684,725	-				+1.0
2,684,811	+				+2.1
2,684,821	+				-0.7
2,684,821	+				-0.3
2,684,821	+				+0.4
2,684,821	+				+0.7
2,684,821	+				+1.1
2,684,821	+				-0.4
2,684,821	+				-0.2
2,684,822	-				+3.6
2,684,822	-				-1.4
2,684,822	-				-0.3
2,684,822	-				+0.2
2,684,823	+				-0.3
2,684,823	+				+0.8
2,684,823	+				-0.5
2,684,824	-				+0.3
2,684,824	-				-0.5
2,684,824	-				-0.9
2,684,824	-				-0.6
2,684,832	+				+0.3
2,684,833	-				-0.3
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2,685,515	-		IAI47_12750	0.62	+1.5
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2,685,515	-		IAI47_12750	0.62	-1.2