Strain Fitness in Pantoea sp. MT58 around IAI47_11015

Experiment: Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
2,322,303	-				-0.9
2,322,303	-				-0.9
2,322,303	-				+0.8
2,322,303	-				+0.6
2,322,303	-				+0.8
2,322,312	+				-0.1
2,322,312	+				-1.0
2,322,312	+				-0.5
2,322,312	+				-0.2
2,322,312	+				+0.7
2,322,313	-				+1.2
2,322,313	-				+2.5
2,322,313	-				-0.9
2,322,313	-				-0.3
2,322,313	-				-2.0
2,322,349	-				-0.1
2,322,349	-				+0.9
2,322,375	+				-2.6
2,322,375	+				-1.3
2,322,375	+				-1.5
2,322,375	+				-0.4
2,322,375	+				-3.3
2,322,376	-				+1.5
2,322,376	-				+3.5
2,322,376	-				+0.8
2,322,376	-				+0.0
2,322,376	-				+0.9
2,322,422	+				+0.6
2,322,422	+				+2.0
2,322,423	-				+0.4
2,322,423	-				+0.8
2,322,423	-				-0.3
2,322,427	+				+5.4
2,322,428	-				+0.5
2,322,428	-				-0.9
2,322,428	-				-0.1
2,322,439	+				-0.1
2,322,439	+				-0.9
2,322,440	-				+1.6
2,322,440	-				+3.0
2,322,440	-				-0.5
2,322,440	-				-1.1
2,322,440	-				-0.3
2,322,441	+				+0.8
2,322,442	-				+0.8
2,322,442	-				+0.8
2,322,461	+				-1.3
2,322,462	-				-1.9
2,322,493	+				+0.1
2,322,493	+				-0.6
2,322,493	+				-0.8
2,322,504	+				-0.3
2,322,505	-				-1.8
2,322,548	-		IAI47_11010	0.14	-0.3
2,322,627	+		IAI47_11010	0.26	-0.1
2,322,627	+		IAI47_11010	0.26	-0.6
2,322,639	-		IAI47_11010	0.28	+0.5
2,322,639	-		IAI47_11010	0.28	+0.2
2,322,679	+		IAI47_11010	0.33	-0.1
2,322,679	+		IAI47_11010	0.33	+1.4
2,322,680	-		IAI47_11010	0.34	-2.2
2,322,688	+		IAI47_11010	0.35	+2.7
2,322,688	+		IAI47_11010	0.35	+0.2
2,322,688	+		IAI47_11010	0.35	-0.9
2,322,688	+		IAI47_11010	0.35	+0.1
2,322,689	-		IAI47_11010	0.35	-1.1
2,322,689	-		IAI47_11010	0.35	+2.5
2,322,689	-		IAI47_11010	0.35	-0.2
2,322,689	-		IAI47_11010	0.35	-0.9
2,322,691	+		IAI47_11010	0.35	+0.2
2,322,691	+		IAI47_11010	0.35	-1.1
2,322,691	+		IAI47_11010	0.35	+0.8
2,322,692	-		IAI47_11010	0.35	+2.3
2,322,692	-		IAI47_11010	0.35	-1.3
2,322,692	-		IAI47_11010	0.35	+0.0
2,322,692	-		IAI47_11010	0.35	+2.8
2,322,854	+		IAI47_11010	0.60	-0.1
2,322,890	+		IAI47_11010	0.65	+0.9
2,322,890	+		IAI47_11010	0.65	-0.4
2,322,890	+		IAI47_11010	0.65	+0.9
2,322,891	-		IAI47_11010	0.65	-0.7
2,322,895	+		IAI47_11010	0.66	+1.1
2,322,895	+		IAI47_11010	0.66	+2.2
2,322,895	+		IAI47_11010	0.66	-0.1
2,322,896	-		IAI47_11010	0.66	+0.9
2,322,896	-		IAI47_11010	0.66	-0.5
2,322,896	-		IAI47_11010	0.66	+0.6
2,322,896	-		IAI47_11010	0.66	+0.5
2,322,896	-		IAI47_11010	0.66	-0.3
2,322,914	+		IAI47_11010	0.69	+0.5
2,322,915	-		IAI47_11010	0.69	+0.4
2,322,915	-		IAI47_11010	0.69	+1.9
2,322,952	+		IAI47_11010	0.74	+0.4
2,322,953	-		IAI47_11010	0.74	+1.0
2,322,953	-		IAI47_11010	0.74	-0.5
2,322,953	-		IAI47_11010	0.74	-0.4
2,322,979	+		IAI47_11010	0.78	+1.0
2,322,979	+		IAI47_11010	0.78	+1.2
2,323,009	+		IAI47_11010	0.83	-0.7
2,323,027	-		IAI47_11010	0.86	-0.7
2,323,269	+				+0.4
2,323,270	-				-0.6
2,323,333	+				-0.7
2,323,401	-		IAI47_11015	0.12	-0.2
2,323,412	+		IAI47_11015	0.14	-1.1
2,323,456	-		IAI47_11015	0.19	-0.8
2,323,508	+		IAI47_11015	0.25	-0.6
2,323,508	+		IAI47_11015	0.25	-0.4
2,323,509	-		IAI47_11015	0.25	+0.5
2,323,509	-		IAI47_11015	0.25	-0.2
2,323,543	+		IAI47_11015	0.29	-1.1
2,323,543	+		IAI47_11015	0.29	-1.0
2,323,544	-		IAI47_11015	0.29	+1.8
2,323,544	-		IAI47_11015	0.29	-1.5
2,323,576	+		IAI47_11015	0.33	+0.1
2,323,577	-		IAI47_11015	0.33	-1.1
2,323,610	+		IAI47_11015	0.37	-0.1
2,323,610	+		IAI47_11015	0.37	+0.8
2,323,676	+		IAI47_11015	0.45	-0.8
2,323,789	+		IAI47_11015	0.59	-0.1
2,323,789	+		IAI47_11015	0.59	-0.2
2,323,911	-		IAI47_11015	0.73	+0.4
2,323,911	-		IAI47_11015	0.73	-1.1
2,323,911	-		IAI47_11015	0.73	+0.3
2,323,911	-		IAI47_11015	0.73	+0.3
2,323,916	+		IAI47_11015	0.74	-0.7
2,323,924	+		IAI47_11015	0.75	+0.9
2,323,989	+		IAI47_11015	0.83	-1.1
2,323,989	+		IAI47_11015	0.83	+0.1
2,323,989	+		IAI47_11015	0.83	-0.8
2,323,989	+		IAI47_11015	0.83	+0.6
2,323,990	-		IAI47_11015	0.83	+0.4
2,323,990	-		IAI47_11015	0.83	+0.7
2,323,993	+		IAI47_11015	0.83	+0.1
2,323,993	+		IAI47_11015	0.83	-1.6
2,323,993	+		IAI47_11015	0.83	-1.4
2,323,993	+		IAI47_11015	0.83	+0.3
2,323,993	+		IAI47_11015	0.83	-0.8
2,323,994	-		IAI47_11015	0.83	-1.1
2,323,994	-		IAI47_11015	0.83	+1.5
2,324,055	-				+0.9
2,324,062	+				+1.0
2,324,062	+				-0.1
2,324,063	-				+0.2
2,324,063	-				+0.6
2,324,063	-				-1.9
2,324,132	+				-0.1
2,324,133	-				-0.2
2,324,147	+				-0.5
2,324,147	+				+0.6
2,324,147	+				-0.4
2,324,147	+				+2.2
2,324,148	-				+0.4
2,324,148	-				-0.5
2,324,148	-				+1.4
2,324,148	-				-2.1
2,324,148	-				+0.2
2,324,148	-				-2.3
2,324,148	-				-1.5
2,324,148	-				-1.5
2,324,148	-				+0.3
2,324,150	+				-0.6
2,324,150	+				-2.1
2,324,150	+				-1.4
2,324,151	-				+0.5
2,324,151	-				+0.4
2,324,151	-				+1.2
2,324,151	-				-0.4
2,324,151	-				+0.1
2,324,155	+				+3.0
2,324,162	+				-1.3
2,324,163	-				-1.5
2,324,163	-				-1.6
2,324,163	-				+1.4
2,324,163	-				+0.9
2,324,180	+				-2.7
2,324,181	-				+0.9
2,324,181	-				-0.8
2,324,216	-				-0.4
2,324,259	-		IAI47_11020	0.14	+0.8
2,324,362	+		IAI47_11020	0.28	-1.0
2,324,362	+		IAI47_11020	0.28	+0.1
2,324,362	+		IAI47_11020	0.28	-1.1
2,324,362	+		IAI47_11020	0.28	-0.4
2,324,363	-		IAI47_11020	0.28	+2.6
2,324,363	-		IAI47_11020	0.28	+0.2
2,324,363	-		IAI47_11020	0.28	+0.9
2,324,363	-		IAI47_11020	0.28	+0.6
2,324,363	-		IAI47_11020	0.28	-1.4
2,324,363	-		IAI47_11020	0.28	+0.8
2,324,366	-		IAI47_11020	0.28	+1.2
2,324,366	-		IAI47_11020	0.28	+0.6
2,324,402	+		IAI47_11020	0.33	-0.6
2,324,423	+		IAI47_11020	0.36	+0.0
2,324,424	-		IAI47_11020	0.36	+0.0
2,324,424	-		IAI47_11020	0.36	-1.7
2,324,435	+		IAI47_11020	0.37	-0.2
2,324,436	-		IAI47_11020	0.37	-1.0
2,324,492	+		IAI47_11020	0.45	-0.7
2,324,492	+		IAI47_11020	0.45	-0.7
2,324,492	+		IAI47_11020	0.45	-1.6
2,324,492	+		IAI47_11020	0.45	+1.1
2,324,493	-		IAI47_11020	0.45	-0.2
2,324,493	-		IAI47_11020	0.45	-0.2
2,324,498	+		IAI47_11020	0.46	+1.3
2,324,498	+		IAI47_11020	0.46	+2.2
2,324,498	+		IAI47_11020	0.46	+1.0
2,324,498	+		IAI47_11020	0.46	-0.1
2,324,499	-		IAI47_11020	0.46	+0.4
2,324,499	-		IAI47_11020	0.46	+1.6
2,324,499	-		IAI47_11020	0.46	-1.7
2,324,543	+		IAI47_11020	0.51	+0.4
2,324,544	-		IAI47_11020	0.52	+1.2
2,324,570	+		IAI47_11020	0.55	+0.3
2,324,570	+		IAI47_11020	0.55	-0.2
2,324,571	-		IAI47_11020	0.55	+0.5
2,324,571	-		IAI47_11020	0.55	+1.9
2,324,622	+		IAI47_11020	0.62	+0.4
2,324,622	+		IAI47_11020	0.62	-0.3
2,324,622	+		IAI47_11020	0.62	-0.5
2,324,622	+		IAI47_11020	0.62	-2.7
2,324,622	+		IAI47_11020	0.62	-0.6
2,324,622	+		IAI47_11020	0.62	-1.1
2,324,622	+		IAI47_11020	0.62	-1.0
2,324,623	-		IAI47_11020	0.62	+0.8
2,324,623	-		IAI47_11020	0.62	+1.5
2,324,623	-		IAI47_11020	0.62	+1.2
2,324,624	+		IAI47_11020	0.62	-0.9
2,324,624	+		IAI47_11020	0.62	-1.3
2,324,625	-		IAI47_11020	0.62	-0.0
2,324,693	+		IAI47_11020	0.71	+0.6
2,324,693	+		IAI47_11020	0.71	-0.4
2,324,694	-		IAI47_11020	0.71	+0.5
2,324,694	-		IAI47_11020	0.71	-0.0
2,324,694	-		IAI47_11020	0.71	-0.1
2,324,718	+		IAI47_11020	0.74	-2.0
2,324,718	+		IAI47_11020	0.74	-2.4
2,324,718	+		IAI47_11020	0.74	-1.0
2,324,718	+		IAI47_11020	0.74	+0.4
2,324,719	-		IAI47_11020	0.75	-1.4
2,324,735	+		IAI47_11020	0.77	+0.9
2,324,833	+		IAI47_11020	0.90	-1.2
2,324,834	-		IAI47_11020	0.90	-1.4
2,324,862	+				-0.1
2,324,862	+				+0.3
2,324,862	+				-1.7
2,324,863	-				-1.5
2,324,863	-				+1.5
2,324,863	-				+0.2
2,324,863	-				-0.4
2,324,874	+				+0.8
2,324,874	+				+0.1
2,324,911	-				-1.0
2,324,949	+				-0.8
2,324,949	+				+1.2
2,324,950	-				-0.9
2,324,952	+				+0.8
2,324,955	+				-1.7
2,324,955	+				-0.4
2,324,973	-				+0.8
2,325,002	-				-0.3
2,325,010	-				-0.5
2,325,010	-				+0.9
2,325,012	-				-1.7
2,325,012	-				+1.3
2,325,038	+				-1.6
2,325,049	+				+0.2
2,325,050	-				+0.3
2,325,050	-				-1.8
2,325,050	-				-0.8