Strain Fitness in Pantoea sp. MT58 around IAI47_09645

Experiment: Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
2,040,705	+		IAI47_09640	0.35	+1.3
2,040,714	+		IAI47_09640	0.36	+0.3
2,040,714	+		IAI47_09640	0.36	+1.4
2,040,714	+		IAI47_09640	0.36	+1.1
2,040,714	+		IAI47_09640	0.36	+2.4
2,040,715	-		IAI47_09640	0.36	-0.5
2,040,715	-		IAI47_09640	0.36	-0.4
2,040,715	-		IAI47_09640	0.36	+0.9
2,040,716	+		IAI47_09640	0.36	+0.1
2,040,716	+		IAI47_09640	0.36	-0.0
2,040,716	+		IAI47_09640	0.36	+1.4
2,040,716	+		IAI47_09640	0.36	+0.1
2,040,716	+		IAI47_09640	0.36	+1.1
2,040,717	-		IAI47_09640	0.36	-2.0
2,040,771	+		IAI47_09640	0.40	+0.1
2,040,771	+		IAI47_09640	0.40	-2.3
2,040,771	+		IAI47_09640	0.40	+1.1
2,040,772	-		IAI47_09640	0.40	+1.1
2,040,772	-		IAI47_09640	0.40	-0.1
2,040,772	-		IAI47_09640	0.40	-1.6
2,040,772	-		IAI47_09640	0.40	-0.1
2,040,772	-		IAI47_09640	0.40	+0.2
2,040,772	-		IAI47_09640	0.40	-1.0
2,040,773	+		IAI47_09640	0.40	-0.9
2,040,773	+		IAI47_09640	0.40	-0.9
2,040,773	+		IAI47_09640	0.40	+0.1
2,040,773	+		IAI47_09640	0.40	+0.8
2,040,773	+		IAI47_09640	0.40	-0.3
2,040,773	+		IAI47_09640	0.40	+1.4
2,040,773	+		IAI47_09640	0.40	-0.2
2,040,774	-		IAI47_09640	0.41	+1.9
2,040,774	-		IAI47_09640	0.41	-0.3
2,040,774	-		IAI47_09640	0.41	-0.2
2,040,774	-		IAI47_09640	0.41	+1.4
2,040,774	-		IAI47_09640	0.41	+1.9
2,040,774	-		IAI47_09640	0.41	+0.5
2,040,774	-		IAI47_09640	0.41	+0.1
2,040,774	-		IAI47_09640	0.41	+0.7
2,040,774	-		IAI47_09640	0.41	-1.6
2,040,774	-		IAI47_09640	0.41	+1.9
2,040,774	-		IAI47_09640	0.41	-2.4
2,040,774	-		IAI47_09640	0.41	+3.1
2,040,774	-		IAI47_09640	0.41	+2.0
2,040,881	+		IAI47_09640	0.49	-0.7
2,040,881	+		IAI47_09640	0.49	+1.0
2,040,881	+		IAI47_09640	0.49	-0.7
2,040,881	+		IAI47_09640	0.49	+0.1
2,040,882	-		IAI47_09640	0.49	+1.3
2,040,883	+		IAI47_09640	0.49	-1.0
2,040,883	+		IAI47_09640	0.49	-1.0
2,040,883	+		IAI47_09640	0.49	+0.3
2,040,883	+		IAI47_09640	0.49	+1.4
2,040,884	-		IAI47_09640	0.49	-1.2
2,040,884	-		IAI47_09640	0.49	+1.9
2,040,933	+		IAI47_09640	0.53	-0.3
2,041,026	+		IAI47_09640	0.61	+0.2
2,041,026	+		IAI47_09640	0.61	+1.6
2,041,027	-		IAI47_09640	0.61	-0.5
2,041,027	-		IAI47_09640	0.61	-0.9
2,041,051	+		IAI47_09640	0.63	-2.5
2,041,051	+		IAI47_09640	0.63	-0.3
2,041,051	+		IAI47_09640	0.63	-0.3
2,041,051	+		IAI47_09640	0.63	+2.5
2,041,124	+		IAI47_09640	0.69	+0.2
2,041,124	+		IAI47_09640	0.69	+0.7
2,041,124	+		IAI47_09640	0.69	-1.3
2,041,124	+		IAI47_09640	0.69	+2.0
2,041,124	+		IAI47_09640	0.69	-0.2
2,041,125	-		IAI47_09640	0.69	+0.4
2,041,125	-		IAI47_09640	0.69	-1.7
2,041,125	-		IAI47_09640	0.69	+3.5
2,041,164	+		IAI47_09640	0.72	+0.3
2,041,164	+		IAI47_09640	0.72	-0.0
2,041,225	-		IAI47_09640	0.77	-0.2
2,041,225	-		IAI47_09640	0.77	+0.2
2,041,225	-		IAI47_09640	0.77	+1.1
2,041,263	+		IAI47_09640	0.80	+0.9
2,041,263	+		IAI47_09640	0.80	-1.1
2,041,263	+		IAI47_09640	0.80	+2.1
2,041,263	+		IAI47_09640	0.80	-1.9
2,041,263	+		IAI47_09640	0.80	+0.4
2,041,264	-		IAI47_09640	0.80	-0.9
2,041,264	-		IAI47_09640	0.80	+1.1
2,041,264	-		IAI47_09640	0.80	-0.6
2,041,266	+		IAI47_09640	0.81	+0.5
2,041,266	+		IAI47_09640	0.81	+0.6
2,041,266	+		IAI47_09640	0.81	-0.7
2,041,458	-				+1.8
2,041,458	-				-1.7
2,041,458	-				+0.8
2,041,507	+				-1.0
2,041,507	+				-1.2
2,041,508	-				+0.2
2,041,508	-				-0.6
2,041,508	-				-1.0
2,041,514	+				-0.6
2,041,514	+				+2.1
2,041,514	+				+0.5
2,041,515	-				-0.3
2,041,518	-				-2.2
2,041,518	-				-1.2
2,041,541	+				+2.1
2,041,559	+				+1.0
2,041,559	+				+0.1
2,041,559	+				-0.8
2,041,560	-				-1.0
2,041,587	+				+0.7
2,041,587	+				+0.8
2,041,587	+				-2.3
2,041,588	-				-0.3
2,041,588	-				-1.6
2,041,591	+				-1.0
2,041,591	+				+1.4
2,041,592	-				+0.7
2,041,592	-				-0.9
2,041,614	-				+1.3
2,041,653	+				-0.5
2,041,654	-				-0.0
2,041,663	+				+1.3
2,041,663	+				-1.5
2,041,663	+				-0.0
2,041,712	+				+0.2
2,041,755	-				+1.0
2,041,755	-				-0.9
2,041,755	-				+0.8
2,041,755	-				-0.7
2,041,755	-				+1.3
2,041,756	+				-0.2
2,041,756	+				-0.5
2,041,756	+				+0.0
2,041,757	-				+0.7
2,041,883	+		IAI47_09645	0.16	+1.1
2,041,884	+		IAI47_09645	0.16	-0.7
2,041,884	+		IAI47_09645	0.16	+0.7
2,041,884	+		IAI47_09645	0.16	-0.9
2,041,884	+		IAI47_09645	0.16	-1.1
2,041,884	+		IAI47_09645	0.16	+1.4
2,041,885	-		IAI47_09645	0.16	-0.4
2,041,885	-		IAI47_09645	0.16	-1.7
2,041,885	-		IAI47_09645	0.16	-0.7
2,041,885	-		IAI47_09645	0.16	-0.1
2,041,886	+		IAI47_09645	0.16	+0.3
2,041,886	+		IAI47_09645	0.16	+0.7
2,041,886	+		IAI47_09645	0.16	+0.7
2,041,886	+		IAI47_09645	0.16	-0.0
2,041,886	+		IAI47_09645	0.16	-0.0
2,041,886	+		IAI47_09645	0.16	+0.4
2,041,886	+		IAI47_09645	0.16	-0.1
2,041,886	+		IAI47_09645	0.16	-0.9
2,041,886	+		IAI47_09645	0.16	-0.2
2,041,886	+		IAI47_09645	0.16	+0.7
2,041,886	+		IAI47_09645	0.16	+0.0
2,041,886	-		IAI47_09645	0.16	+1.5
2,041,887	-		IAI47_09645	0.16	-0.5
2,041,887	-		IAI47_09645	0.16	+0.5
2,041,887	-		IAI47_09645	0.16	-0.5
2,041,887	-		IAI47_09645	0.16	-0.4
2,041,887	-		IAI47_09645	0.16	+4.8
2,041,887	-		IAI47_09645	0.16	-0.5
2,041,927	+		IAI47_09645	0.19	-1.6
2,041,927	+		IAI47_09645	0.19	-1.2
2,041,927	+		IAI47_09645	0.19	-0.2
2,041,927	+		IAI47_09645	0.19	+1.1
2,041,927	+		IAI47_09645	0.19	+0.1
2,041,927	+		IAI47_09645	0.19	-1.0
2,041,928	-		IAI47_09645	0.19	-0.5
2,041,928	-		IAI47_09645	0.19	-0.2
2,041,928	-		IAI47_09645	0.19	-1.0
2,041,982	-		IAI47_09645	0.22	-0.3
2,042,033	+		IAI47_09645	0.25	+0.5
2,042,033	+		IAI47_09645	0.25	+0.7
2,042,033	+		IAI47_09645	0.25	+0.1
2,042,033	+		IAI47_09645	0.25	-1.3
2,042,033	+		IAI47_09645	0.25	-0.7
2,042,034	-		IAI47_09645	0.25	-0.7
2,042,034	-		IAI47_09645	0.25	-3.1
2,042,034	-		IAI47_09645	0.25	-1.5
2,042,034	-		IAI47_09645	0.25	+0.2
2,042,034	-		IAI47_09645	0.25	+2.4
2,042,071	+		IAI47_09645	0.28	+2.1
2,042,071	+		IAI47_09645	0.28	-0.9
2,042,071	+		IAI47_09645	0.28	+0.6
2,042,071	+		IAI47_09645	0.28	+0.7
2,042,072	-		IAI47_09645	0.28	-0.0
2,042,077	+		IAI47_09645	0.28	-1.0
2,042,077	+		IAI47_09645	0.28	+0.0
2,042,078	-		IAI47_09645	0.28	-0.1
2,042,078	-		IAI47_09645	0.28	-0.2
2,042,078	-		IAI47_09645	0.28	+0.9
2,042,078	-		IAI47_09645	0.28	+1.0
2,042,156	+		IAI47_09645	0.33	+0.0
2,042,157	-		IAI47_09645	0.33	-0.4
2,042,157	-		IAI47_09645	0.33	+0.4
2,042,184	-		IAI47_09645	0.35	-0.2
2,042,227	+		IAI47_09645	0.37	+1.5
2,042,228	-		IAI47_09645	0.37	-1.3
2,042,267	+		IAI47_09645	0.40	-1.3
2,042,291	+		IAI47_09645	0.41	-0.8
2,042,291	+		IAI47_09645	0.41	-1.0
2,042,292	-		IAI47_09645	0.41	+0.3
2,042,292	-		IAI47_09645	0.41	+2.1
2,042,292	-		IAI47_09645	0.41	-0.3
2,042,293	+		IAI47_09645	0.41	+0.4
2,042,294	-		IAI47_09645	0.42	+0.5
2,042,294	-		IAI47_09645	0.42	-2.6
2,042,353	+		IAI47_09645	0.45	+0.3
2,042,354	-		IAI47_09645	0.45	+0.0
2,042,375	+		IAI47_09645	0.47	-0.2
2,042,406	+		IAI47_09645	0.49	+0.6
2,042,406	+		IAI47_09645	0.49	+2.2
2,042,406	+		IAI47_09645	0.49	-0.7
2,042,407	-		IAI47_09645	0.49	-0.2
2,042,407	-		IAI47_09645	0.49	+0.5
2,042,506	+		IAI47_09645	0.55	-0.2
2,042,506	+		IAI47_09645	0.55	+1.7
2,042,507	-		IAI47_09645	0.55	-2.2
2,042,507	-		IAI47_09645	0.55	-0.0
2,042,507	-		IAI47_09645	0.55	-0.8
2,042,516	-		IAI47_09645	0.55	+0.3
2,042,516	-		IAI47_09645	0.55	+3.2
2,042,516	-		IAI47_09645	0.55	+0.4
2,042,565	-		IAI47_09645	0.59	+0.2
2,042,592	+		IAI47_09645	0.60	+0.2
2,042,592	+		IAI47_09645	0.60	+1.4
2,042,593	-		IAI47_09645	0.60	+4.2
2,042,623	+		IAI47_09645	0.62	+0.8
2,042,623	+		IAI47_09645	0.62	-0.5
2,042,624	-		IAI47_09645	0.62	-0.9
2,042,669	+		IAI47_09645	0.65	-0.5
2,042,669	+		IAI47_09645	0.65	-1.0
2,042,669	+		IAI47_09645	0.65	+0.2
2,042,670	-		IAI47_09645	0.65	+0.7
2,042,670	-		IAI47_09645	0.65	-0.1
2,042,670	-		IAI47_09645	0.65	+0.7
2,042,768	+		IAI47_09645	0.71	+1.1
2,042,768	+		IAI47_09645	0.71	-0.5
2,042,768	+		IAI47_09645	0.71	+1.5
2,042,768	+		IAI47_09645	0.71	+0.1
2,042,769	-		IAI47_09645	0.71	+0.1
2,042,769	-		IAI47_09645	0.71	-1.3
2,042,839	+		IAI47_09645	0.76	-0.9
2,042,849	+		IAI47_09645	0.76	-0.3
2,042,849	+		IAI47_09645	0.76	-0.4
2,042,849	+		IAI47_09645	0.76	+0.4
2,042,849	+		IAI47_09645	0.76	-1.6
2,042,849	+		IAI47_09645	0.76	+1.3
2,042,849	+		IAI47_09645	0.76	+0.8
2,042,850	-		IAI47_09645	0.76	-0.7
2,042,850	-		IAI47_09645	0.76	-1.5
2,042,850	-		IAI47_09645	0.76	+1.3
2,042,850	-		IAI47_09645	0.76	-0.7
2,042,864	+		IAI47_09645	0.77	-1.5
2,042,939	-		IAI47_09645	0.82	+1.0
2,042,958	-		IAI47_09645	0.83	+1.0
2,042,965	+		IAI47_09645	0.84	+0.5
2,042,965	+		IAI47_09645	0.84	-2.5
2,042,965	+		IAI47_09645	0.84	-0.9
2,042,965	+		IAI47_09645	0.84	+0.1
2,042,966	-		IAI47_09645	0.84	-0.1
2,042,966	-		IAI47_09645	0.84	-0.0
2,042,966	-		IAI47_09645	0.84	-1.3
2,042,966	-		IAI47_09645	0.84	-0.4
2,042,966	-		IAI47_09645	0.84	+1.5
2,042,986	+		IAI47_09645	0.85	+0.5
2,042,986	+		IAI47_09645	0.85	+0.1
2,042,986	+		IAI47_09645	0.85	+0.5
2,042,986	+		IAI47_09645	0.85	-0.8
2,042,987	-		IAI47_09645	0.85	+0.8
2,042,987	-		IAI47_09645	0.85	-1.8
2,042,987	-		IAI47_09645	0.85	+0.1
2,043,005	+		IAI47_09645	0.86	+0.3
2,043,006	-		IAI47_09645	0.86	-0.5
2,043,006	-		IAI47_09645	0.86	-0.1
2,043,006	-		IAI47_09645	0.86	-0.8
2,043,024	+		IAI47_09645	0.87	-0.9
2,043,025	-		IAI47_09645	0.87	+0.4
2,043,025	-		IAI47_09645	0.87	-0.2
2,043,074	+				-0.2
2,043,075	-				+1.6
2,043,093	+				-0.3
2,043,094	-				-0.8
2,043,094	-				-2.0
2,043,196	+				-3.0
2,043,196	+				+2.1
2,043,196	+				-0.2
2,043,196	+				+0.8
2,043,196	+				+2.1
2,043,196	+				-1.0
2,043,197	-				+0.3
2,043,197	-				-0.8
2,043,197	-				-0.2
2,043,197	-				+0.7
2,043,197	-				+0.1
2,043,197	-				-0.5
2,043,197	-				+0.6
2,043,197	-				+0.5
2,043,197	-				-0.1
2,043,203	+				+0.2
2,043,203	+				-0.3
2,043,203	+				+0.5
2,043,203	+				-0.5
2,043,203	+				-0.1
2,043,214	+				+1.1
2,043,214	+				+1.9
2,043,215	-				+2.0
2,043,217	+				-0.1
2,043,217	+				-0.1
2,043,217	+				+2.8
2,043,217	+				-0.3
2,043,218	-				-0.5
2,043,218	-				+0.4
2,043,218	-				+1.3
2,043,218	-				+0.0
2,043,218	-				-0.7
2,043,218	-				-0.0
2,043,218	-				+2.7
2,043,238	+				+0.3
2,043,331	-				-1.5
2,043,331	-				+3.0
2,043,455	+		IAI47_09650	0.20	+0.2
2,043,455	+		IAI47_09650	0.20	+2.0
2,043,456	-		IAI47_09650	0.20	-0.1
2,043,456	-		IAI47_09650	0.20	-0.0
2,043,464	+		IAI47_09650	0.21	-0.0
2,043,488	+		IAI47_09650	0.24	-0.2
2,043,489	-		IAI47_09650	0.24	-0.7
2,043,489	-		IAI47_09650	0.24	-1.2
2,043,489	-		IAI47_09650	0.24	-0.9
2,043,505	+		IAI47_09650	0.26	-2.6
2,043,743	+		IAI47_09650	0.52	-1.9
2,043,876	-		IAI47_09650	0.66	-0.8
2,043,884	+		IAI47_09650	0.67	+0.4
2,043,885	-		IAI47_09650	0.67	-0.1
2,043,885	-		IAI47_09650	0.67	-0.7
2,043,885	-		IAI47_09650	0.67	+0.7
2,043,885	-		IAI47_09650	0.67	+0.6
2,043,885	-		IAI47_09650	0.67	+0.7
2,043,921	+		IAI47_09650	0.71	+0.1
2,043,921	+		IAI47_09650	0.71	-1.2
2,043,955	+		IAI47_09650	0.75	-0.7
2,043,955	+		IAI47_09650	0.75	+1.1
2,043,955	+		IAI47_09650	0.75	-0.4
2,043,956	-		IAI47_09650	0.75	+1.4
2,043,956	-		IAI47_09650	0.75	+2.6
2,043,956	-		IAI47_09650	0.75	-1.1
2,043,956	-		IAI47_09650	0.75	+0.3
2,043,977	+		IAI47_09650	0.77	+0.1
2,043,977	+		IAI47_09650	0.77	+0.5
2,043,977	+		IAI47_09650	0.77	-1.8
2,043,977	+		IAI47_09650	0.77	-0.9
2,043,977	+		IAI47_09650	0.77	+0.1
2,043,977	+		IAI47_09650	0.77	+0.1
2,043,978	-		IAI47_09650	0.77	-0.9
2,043,978	-		IAI47_09650	0.77	-2.0
2,043,978	-		IAI47_09650	0.77	+1.2
2,043,978	-		IAI47_09650	0.77	-0.0
2,043,978	-		IAI47_09650	0.77	+0.3
2,044,179	+				-0.3
2,044,179	+				-0.8
2,044,179	+				+2.0
2,044,179	+				+0.5
2,044,180	-				+0.1
2,044,180	-				-1.3
2,044,180	-				+0.7
2,044,180	-				+0.7
2,044,180	-				+0.6
2,044,180	-				-0.9
2,044,208	+				-1.3
2,044,209	-				+1.6
2,044,209	-				+0.6
2,044,209	-				+0.5
2,044,209	-				-0.7