Strain Fitness in Pantoea sp. MT58 around IAI47_18645

Experiment: Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
3,975,243	+				+1.4
3,975,265	+				-0.1
3,975,265	+				-0.7
3,975,265	+				-1.6
3,975,266	-				+2.3
3,975,266	-				+0.2
3,975,266	-				+0.4
3,975,274	+				-0.7
3,975,280	+				-0.2
3,975,280	+				-0.8
3,975,280	+				+1.7
3,975,280	+				-1.0
3,975,280	+				-0.9
3,975,280	+				+0.4
3,975,280	+				+2.3
3,975,281	-				-2.1
3,975,283	+				-1.0
3,975,284	-				+0.6
3,975,306	-				-1.9
3,975,306	-				+0.0
3,975,306	-				+0.1
3,975,306	-				-0.2
3,975,357	+				+0.1
3,975,357	+				-0.2
3,975,357	+				-0.7
3,975,357	+				-0.6
3,975,358	-				-0.1
3,975,358	-				+0.8
3,975,425	+		IAI47_18640	0.13	-0.5
3,975,425	+		IAI47_18640	0.13	-0.8
3,975,426	-		IAI47_18640	0.14	-0.6
3,975,532	+		IAI47_18640	0.25	+0.4
3,975,532	+		IAI47_18640	0.25	+1.3
3,975,532	+		IAI47_18640	0.25	-0.1
3,975,532	+		IAI47_18640	0.25	-0.4
3,975,532	+		IAI47_18640	0.25	+0.6
3,975,532	+		IAI47_18640	0.25	-1.2
3,975,533	-		IAI47_18640	0.25	+0.1
3,975,550	-		IAI47_18640	0.27	-0.9
3,975,567	+		IAI47_18640	0.29	+3.6
3,975,568	-		IAI47_18640	0.29	+2.1
3,975,576	+		IAI47_18640	0.30	+0.8
3,975,576	+		IAI47_18640	0.30	+0.3
3,975,577	-		IAI47_18640	0.30	+0.9
3,975,600	+		IAI47_18640	0.33	-0.4
3,975,632	+		IAI47_18640	0.36	-0.2
3,975,632	+		IAI47_18640	0.36	+0.5
3,975,632	+		IAI47_18640	0.36	-0.9
3,975,632	+		IAI47_18640	0.36	-0.0
3,975,633	-		IAI47_18640	0.36	+0.3
3,975,633	-		IAI47_18640	0.36	-1.1
3,975,633	-		IAI47_18640	0.36	+0.5
3,975,633	-		IAI47_18640	0.36	-0.0
3,975,678	+		IAI47_18640	0.41	-1.0
3,975,678	+		IAI47_18640	0.41	+0.4
3,975,678	+		IAI47_18640	0.41	+1.1
3,975,679	-		IAI47_18640	0.42	-0.9
3,975,679	-		IAI47_18640	0.42	-0.6
3,975,680	+		IAI47_18640	0.42	-0.4
3,975,680	+		IAI47_18640	0.42	+0.0
3,975,680	+		IAI47_18640	0.42	-1.0
3,975,680	+		IAI47_18640	0.42	-1.1
3,975,680	+		IAI47_18640	0.42	-0.3
3,975,680	+		IAI47_18640	0.42	+1.6
3,975,680	+		IAI47_18640	0.42	+2.5
3,975,681	-		IAI47_18640	0.42	-1.6
3,975,681	-		IAI47_18640	0.42	-2.0
3,975,681	-		IAI47_18640	0.42	-2.4
3,975,681	-		IAI47_18640	0.42	-0.3
3,975,681	-		IAI47_18640	0.42	+0.3
3,975,681	-		IAI47_18640	0.42	+1.7
3,975,681	-		IAI47_18640	0.42	+0.2
3,975,681	-		IAI47_18640	0.42	-0.9
3,975,681	-		IAI47_18640	0.42	+0.2
3,975,681	-		IAI47_18640	0.42	+0.3
3,975,681	-		IAI47_18640	0.42	+0.1
3,975,790	-		IAI47_18640	0.54	-0.4
3,975,797	-		IAI47_18640	0.55	+0.1
3,975,833	+		IAI47_18640	0.59	+4.0
3,975,834	-		IAI47_18640	0.59	-1.2
3,975,853	+		IAI47_18640	0.61	-0.2
3,975,853	+		IAI47_18640	0.61	-0.5
3,975,853	+		IAI47_18640	0.61	+1.0
3,975,854	-		IAI47_18640	0.61	-1.9
3,975,920	+		IAI47_18640	0.68	-1.2
3,975,920	+		IAI47_18640	0.68	+0.7
3,975,920	+		IAI47_18640	0.68	-0.5
3,975,920	+		IAI47_18640	0.68	-0.1
3,975,920	+		IAI47_18640	0.68	+0.4
3,975,920	+		IAI47_18640	0.68	-0.1
3,975,920	+		IAI47_18640	0.68	-0.7
3,975,920	+		IAI47_18640	0.68	-0.8
3,975,920	+		IAI47_18640	0.68	+0.1
3,975,920	+		IAI47_18640	0.68	+1.7
3,975,920	+		IAI47_18640	0.68	-1.2
3,975,920	+		IAI47_18640	0.68	-0.1
3,975,920	+		IAI47_18640	0.68	+0.0
3,975,920	+		IAI47_18640	0.68	-0.0
3,975,920	+		IAI47_18640	0.68	+0.2
3,975,921	-		IAI47_18640	0.68	-2.8
3,975,921	-		IAI47_18640	0.68	-0.5
3,975,921	-		IAI47_18640	0.68	-0.9
3,975,921	-		IAI47_18640	0.68	-0.5
3,975,921	-		IAI47_18640	0.68	-1.7
3,975,921	-		IAI47_18640	0.68	+1.8
3,975,921	-		IAI47_18640	0.68	+0.2
3,975,921	-		IAI47_18640	0.68	-0.4
3,975,971	+		IAI47_18640	0.74	-2.8
3,975,971	+		IAI47_18640	0.74	-1.5
3,975,971	+		IAI47_18640	0.74	+2.9
3,975,971	+		IAI47_18640	0.74	-0.3
3,975,972	-		IAI47_18640	0.74	-1.0
3,975,972	-		IAI47_18640	0.74	-1.2
3,975,972	-		IAI47_18640	0.74	+0.4
3,975,972	-		IAI47_18640	0.74	-0.9
3,975,972	-		IAI47_18640	0.74	-0.4
3,976,054	+		IAI47_18640	0.83	-0.6
3,976,054	+		IAI47_18640	0.83	+0.6
3,976,054	+		IAI47_18640	0.83	-0.3
3,976,054	+		IAI47_18640	0.83	-0.5
3,976,054	+		IAI47_18640	0.83	+2.2
3,976,054	+		IAI47_18640	0.83	+0.8
3,976,055	-		IAI47_18640	0.83	+0.1
3,976,055	-		IAI47_18640	0.83	+3.6
3,976,055	-		IAI47_18640	0.83	-0.9
3,976,055	-		IAI47_18640	0.83	+1.5
3,976,055	-		IAI47_18640	0.83	-0.1
3,976,068	+		IAI47_18640	0.85	+1.4
3,976,068	+		IAI47_18640	0.85	+0.4
3,976,069	-		IAI47_18640	0.85	+0.4
3,976,081	+		IAI47_18640	0.86	-1.5
3,976,081	+		IAI47_18640	0.86	-1.4
3,976,081	+		IAI47_18640	0.86	-1.0
3,976,081	+		IAI47_18640	0.86	-0.5
3,976,081	+		IAI47_18640	0.86	+2.0
3,976,081	+		IAI47_18640	0.86	+1.3
3,976,081	+		IAI47_18640	0.86	+0.9
3,976,082	-		IAI47_18640	0.86	-0.6
3,976,082	-		IAI47_18640	0.86	-1.1
3,976,082	-		IAI47_18640	0.86	-0.1
3,976,082	-		IAI47_18640	0.86	+2.0
3,976,082	-		IAI47_18640	0.86	-0.8
3,976,082	-		IAI47_18640	0.86	+3.2
3,976,082	-		IAI47_18640	0.86	+1.1
3,976,082	-		IAI47_18640	0.86	-0.7
3,976,094	+		IAI47_18640	0.87	+1.1
3,976,094	+		IAI47_18640	0.87	-0.9
3,976,094	+		IAI47_18640	0.87	+0.9
3,976,095	-		IAI47_18640	0.88	+0.3
3,976,095	-		IAI47_18640	0.88	+0.0
3,976,095	-		IAI47_18640	0.88	-0.7
3,976,095	-		IAI47_18640	0.88	-1.0
3,976,095	-		IAI47_18640	0.88	+0.8
3,976,122	+				+0.7
3,976,122	+				-0.4
3,976,128	+				-1.1
3,976,128	+				-1.6
3,976,128	+				+0.2
3,976,129	-				+1.3
3,976,133	+				-0.5
3,976,134	-				+0.9
3,976,134	-				+0.7
3,976,134	-				-0.0
3,976,134	-				-0.0
3,976,218	-				-0.5
3,976,231	+				+0.3
3,976,231	+				-0.6
3,976,231	+				+1.7
3,976,231	+				+1.4
3,976,231	+				+0.5
3,976,231	+				-1.9
3,976,231	-				+0.4
3,976,232	-				+0.9
3,976,232	-				+0.3
3,976,232	-				-0.1
3,976,232	-				-0.7
3,976,232	-				-1.9
3,976,232	-				-1.7
3,976,243	-				+0.2
3,976,253	+				-1.5
3,976,253	+				-0.5
3,976,253	+				-0.2
3,976,253	+				-1.3
3,976,253	+				-0.2
3,976,254	-				-0.6
3,976,254	-				-0.3
3,976,254	-				+0.3
3,976,254	-				+1.4
3,976,254	-				+0.5
3,976,291	+				-0.1
3,976,292	-				+0.4
3,976,438	+		IAI47_18645	0.22	-1.0
3,976,438	+		IAI47_18645	0.22	-0.9
3,976,438	+		IAI47_18645	0.22	+0.2
3,976,439	-		IAI47_18645	0.22	-1.8
3,976,439	-		IAI47_18645	0.22	+2.5
3,976,439	-		IAI47_18645	0.22	-1.4
3,976,439	-		IAI47_18645	0.22	+1.2
3,976,509	+		IAI47_18645	0.29	-1.1
3,976,529	+		IAI47_18645	0.31	+0.2
3,976,529	+		IAI47_18645	0.31	+0.9
3,976,529	+		IAI47_18645	0.31	-0.9
3,976,529	+		IAI47_18645	0.31	-1.6
3,976,530	-		IAI47_18645	0.31	-2.8
3,976,530	-		IAI47_18645	0.31	+0.1
3,976,530	-		IAI47_18645	0.31	-1.0
3,976,530	-		IAI47_18645	0.31	-1.0
3,976,569	+		IAI47_18645	0.35	+0.6
3,976,569	+		IAI47_18645	0.35	+0.5
3,976,569	+		IAI47_18645	0.35	-0.4
3,976,569	+		IAI47_18645	0.35	+0.1
3,976,569	+		IAI47_18645	0.35	-0.5
3,976,569	+		IAI47_18645	0.35	+1.9
3,976,570	-		IAI47_18645	0.35	+1.9
3,976,570	-		IAI47_18645	0.35	-1.5
3,976,570	-		IAI47_18645	0.35	+0.7
3,976,570	-		IAI47_18645	0.35	-0.4
3,976,576	+		IAI47_18645	0.35	+0.4
3,976,576	+		IAI47_18645	0.35	-0.1
3,976,576	+		IAI47_18645	0.35	+0.5
3,976,576	+		IAI47_18645	0.35	-2.0
3,976,576	+		IAI47_18645	0.35	+1.6
3,976,577	-		IAI47_18645	0.35	-0.8
3,976,577	-		IAI47_18645	0.35	-1.5
3,976,577	-		IAI47_18645	0.35	+0.6
3,976,683	+		IAI47_18645	0.46	+0.4
3,976,683	+		IAI47_18645	0.46	+1.2
3,976,683	+		IAI47_18645	0.46	+0.8
3,976,683	+		IAI47_18645	0.46	-1.0
3,976,684	-		IAI47_18645	0.46	-1.9
3,976,684	-		IAI47_18645	0.46	+1.4
3,976,684	-		IAI47_18645	0.46	+0.5
3,976,684	-		IAI47_18645	0.46	-0.7
3,976,684	-		IAI47_18645	0.46	-1.2
3,976,684	-		IAI47_18645	0.46	+0.0
3,976,684	-		IAI47_18645	0.46	+0.0
3,976,912	+		IAI47_18645	0.68	-1.6
3,976,912	+		IAI47_18645	0.68	+3.1
3,976,912	+		IAI47_18645	0.68	+1.5
3,976,912	+		IAI47_18645	0.68	+0.1
3,976,912	+		IAI47_18645	0.68	+1.5
3,976,912	+		IAI47_18645	0.68	-2.1
3,976,912	+		IAI47_18645	0.68	-0.0
3,976,912	+		IAI47_18645	0.68	-0.1
3,976,913	-		IAI47_18645	0.68	+1.5
3,976,913	-		IAI47_18645	0.68	-0.2
3,976,913	-		IAI47_18645	0.68	-2.7
3,976,913	-		IAI47_18645	0.68	-1.0
3,976,913	-		IAI47_18645	0.68	-1.1
3,976,913	-		IAI47_18645	0.68	+0.1
3,976,913	-		IAI47_18645	0.68	-0.6
3,976,913	-		IAI47_18645	0.68	-0.6
3,976,913	-		IAI47_18645	0.68	+0.1
3,976,926	+		IAI47_18645	0.70	+2.0
3,976,989	+		IAI47_18645	0.76	-0.1
3,976,990	-		IAI47_18645	0.76	-2.1
3,976,990	-		IAI47_18645	0.76	+1.0
3,977,014	+		IAI47_18645	0.78	-1.6
3,977,014	+		IAI47_18645	0.78	-1.1
3,977,014	+		IAI47_18645	0.78	+1.0
3,977,014	+		IAI47_18645	0.78	+1.6
3,977,014	+		IAI47_18645	0.78	+0.9
3,977,014	+		IAI47_18645	0.78	+0.6
3,977,014	+		IAI47_18645	0.78	-1.6
3,977,014	+		IAI47_18645	0.78	+1.0
3,977,014	+		IAI47_18645	0.78	+0.6
3,977,014	+		IAI47_18645	0.78	+0.7
3,977,015	-		IAI47_18645	0.78	-2.8
3,977,015	-		IAI47_18645	0.78	-1.8
3,977,015	-		IAI47_18645	0.78	-0.2
3,977,015	-		IAI47_18645	0.78	+2.0
3,977,015	-		IAI47_18645	0.78	+2.6
3,977,015	-		IAI47_18645	0.78	-0.5
3,977,015	-		IAI47_18645	0.78	-0.0
3,977,015	-		IAI47_18645	0.78	-2.1
3,977,017	+		IAI47_18645	0.79	-0.9
3,977,017	+		IAI47_18645	0.79	-0.7
3,977,017	+		IAI47_18645	0.79	-1.3
3,977,017	+		IAI47_18645	0.79	-1.0
3,977,017	+		IAI47_18645	0.79	+0.4
3,977,018	-		IAI47_18645	0.79	-0.6
3,977,018	-		IAI47_18645	0.79	-0.2
3,977,018	-		IAI47_18645	0.79	-0.3
3,977,026	-		IAI47_18645	0.79	-0.3
3,977,030	+		IAI47_18645	0.80	-0.4
3,977,031	-		IAI47_18645	0.80	-0.5
3,977,031	-		IAI47_18645	0.80	+0.6
3,977,039	+		IAI47_18645	0.81	+1.1
3,977,039	+		IAI47_18645	0.81	+1.0
3,977,039	+		IAI47_18645	0.81	-2.9
3,977,040	-		IAI47_18645	0.81	+1.2
3,977,040	-		IAI47_18645	0.81	-0.7
3,977,080	+		IAI47_18645	0.85	+0.9
3,977,080	+		IAI47_18645	0.85	-0.9
3,977,080	+		IAI47_18645	0.85	+1.0
3,977,081	-		IAI47_18645	0.85	+0.7
3,977,081	-		IAI47_18645	0.85	+1.2
3,977,106	+		IAI47_18645	0.87	-2.0
3,977,107	-		IAI47_18645	0.87	-0.5
3,977,173	+				+0.6
3,977,173	+				-0.5
3,977,173	+				+1.1
3,977,174	-				-0.0
3,977,174	-				-0.4
3,977,174	-				-0.2
3,977,174	-				+0.1
3,977,174	-				-2.6
3,977,174	-				+0.5
3,977,174	-				-0.7
3,977,174	-				+0.3
3,977,178	+				+0.5
3,977,178	+				-0.3
3,977,178	+				-2.8
3,977,178	+				+0.3
3,977,178	+				-0.4
3,977,178	+				-1.0
3,977,179	-				+0.6
3,977,179	-				-0.6
3,977,179	-				-2.0
3,977,179	-				-0.4
3,977,179	-				+1.6
3,977,179	-				-0.5
3,977,179	-				-0.2
3,977,179	-				-1.0
3,977,179	-				+0.4
3,977,200	-				-0.3
3,977,221	+				+0.8
3,977,222	-				+0.4
3,977,222	-				-0.1
3,977,222	-				-0.1
3,977,222	-				-1.2
3,977,222	-				+0.4
3,977,235	+				+0.2
3,977,235	+				-0.6
3,977,235	+				-1.4
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