Strain Fitness in Pantoea sp. MT58 around IAI47_13970

Experiment: Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
2,952,793	+				-1.6
2,952,793	+				+1.2
2,952,793	+				-0.3
2,952,794	-				+1.6
2,952,853	+				+0.1
2,952,853	+				-0.7
2,952,853	+				+0.1
2,952,853	+				-0.2
2,952,853	+				+1.8
2,952,853	+				-0.5
2,952,853	+				-0.4
2,952,853	+				-1.4
2,952,854	-				-0.2
2,952,854	-				+0.2
2,952,854	-				-0.0
2,952,854	-				+2.4
2,952,854	-				+1.0
2,952,854	-				+0.4
2,952,854	-				-2.3
2,952,854	-				+0.3
2,952,854	-				-0.2
2,952,854	-				-1.7
2,952,874	-				-0.5
2,952,912	+				+0.4
2,952,948	+				+0.7
2,952,948	+				-0.9
2,952,948	+				+0.1
2,952,949	-				+1.5
2,952,949	-				+1.1
2,952,949	-				-2.1
2,952,958	+				-0.8
2,952,959	-				-2.0
2,952,959	-				-2.5
2,952,959	-				+3.2
2,953,116	+				-0.2
2,953,206	+				+1.4
2,953,211	+				-1.4
2,953,211	+				-0.3
2,953,211	+				+0.7
2,953,211	+				+0.8
2,953,211	+				+0.3
2,953,211	+				+0.6
2,953,211	+				+1.0
2,953,212	-				-2.1
2,953,212	-				-1.8
2,953,212	-				-1.2
2,953,212	-				-0.6
2,953,212	-				+1.0
2,953,212	-				-0.0
2,953,233	+				-0.5
2,953,233	+				+0.0
2,953,281	+				+2.2
2,953,282	-				-1.0
2,953,282	-				+0.0
2,953,295	+				+1.0
2,953,295	+				-0.7
2,953,295	+				-0.7
2,953,295	+				-1.2
2,953,295	+				-1.3
2,953,295	+				-1.9
2,953,295	+				-2.4
2,953,295	+				+0.8
2,953,296	-				+0.5
2,953,296	-				-0.1
2,953,296	-				+1.7
2,953,296	-				-1.4
2,953,296	-				+2.4
2,953,296	-				+0.4
2,953,296	-				-1.7
2,953,297	+				+0.6
2,953,297	+				+0.9
2,953,297	+				+0.6
2,953,298	-				+1.0
2,953,315	+				-1.7
2,953,339	+				-0.9
2,953,339	+				+0.7
2,953,339	+				-0.3
2,953,339	+				+0.3
2,953,340	-				+3.3
2,953,340	-				-1.2
2,953,340	-				+0.8
2,953,340	-				+2.4
2,953,340	-				-0.0
2,953,354	+				+0.5
2,953,354	+				-1.4
2,953,354	+				-1.4
2,953,354	+				+2.7
2,953,354	+				+0.4
2,953,355	-				-1.6
2,953,355	-				+0.2
2,953,482	+		IAI47_13970	0.17	-0.6
2,953,483	-		IAI47_13970	0.17	-0.2
2,953,483	-		IAI47_13970	0.17	+0.4
2,953,485	+		IAI47_13970	0.17	+0.8
2,953,485	+		IAI47_13970	0.17	+0.2
2,953,486	-		IAI47_13970	0.17	-0.7
2,953,486	-		IAI47_13970	0.17	+2.8
2,953,486	-		IAI47_13970	0.17	+1.1
2,953,486	-		IAI47_13970	0.17	+0.7
2,953,513	-		IAI47_13970	0.20	-1.7
2,953,524	+		IAI47_13970	0.21	-1.4
2,953,525	-		IAI47_13970	0.22	+1.0
2,953,525	-		IAI47_13970	0.22	-0.6
2,953,614	-		IAI47_13970	0.31	+3.4
2,953,638	+		IAI47_13970	0.34	+1.4
2,953,638	+		IAI47_13970	0.34	+1.2
2,953,638	+		IAI47_13970	0.34	-0.8
2,953,638	+		IAI47_13970	0.34	-0.3
2,953,638	+		IAI47_13970	0.34	+0.2
2,953,638	+		IAI47_13970	0.34	-0.4
2,953,638	+		IAI47_13970	0.34	-0.6
2,953,638	+		IAI47_13970	0.34	-1.5
2,953,638	+		IAI47_13970	0.34	-2.0
2,953,639	-		IAI47_13970	0.34	-0.7
2,953,639	-		IAI47_13970	0.34	+0.8
2,953,639	-		IAI47_13970	0.34	-1.5
2,953,639	-		IAI47_13970	0.34	-0.1
2,953,639	-		IAI47_13970	0.34	-1.4
2,953,639	-		IAI47_13970	0.34	-0.2
2,953,639	-		IAI47_13970	0.34	+1.4
2,953,644	+		IAI47_13970	0.35	+0.4
2,953,644	+		IAI47_13970	0.35	+0.5
2,953,644	+		IAI47_13970	0.35	-0.0
2,953,645	-		IAI47_13970	0.35	-1.0
2,953,645	-		IAI47_13970	0.35	-0.2
2,953,645	-		IAI47_13970	0.35	+1.3
2,953,645	-		IAI47_13970	0.35	+1.7
2,953,667	+		IAI47_13970	0.37	-2.1
2,953,667	+		IAI47_13970	0.37	-0.7
2,953,737	-		IAI47_13970	0.45	+0.4
2,953,792	+		IAI47_13970	0.51	-1.5
2,953,792	+		IAI47_13970	0.51	-1.0
2,953,793	-		IAI47_13970	0.51	+0.9
2,953,805	+		IAI47_13970	0.53	-0.7
2,953,805	+		IAI47_13970	0.53	-1.5
2,953,805	+		IAI47_13970	0.53	+0.2
2,953,805	+		IAI47_13970	0.53	-0.6
2,953,805	+		IAI47_13970	0.53	-0.1
2,953,805	+		IAI47_13970	0.53	+1.8
2,953,806	-		IAI47_13970	0.53	-1.3
2,953,806	-		IAI47_13970	0.53	+2.4
2,953,853	+		IAI47_13970	0.58	-2.3
2,953,895	+		IAI47_13970	0.63	+2.2
2,953,895	+		IAI47_13970	0.63	-0.2
2,953,895	+		IAI47_13970	0.63	-0.6
2,953,895	+		IAI47_13970	0.63	-0.9
2,953,896	-		IAI47_13970	0.63	+0.6
2,953,896	-		IAI47_13970	0.63	-2.9
2,953,926	-		IAI47_13970	0.66	-2.1
2,953,926	-		IAI47_13970	0.66	-1.7
2,953,926	-		IAI47_13970	0.66	-1.0
2,954,009	+		IAI47_13970	0.75	+0.3
2,954,009	+		IAI47_13970	0.75	-1.0
2,954,010	-		IAI47_13970	0.76	-2.6
2,954,010	-		IAI47_13970	0.76	+0.4
2,954,019	+		IAI47_13970	0.77	-0.0
2,954,019	+		IAI47_13970	0.77	-1.1
2,954,019	+		IAI47_13970	0.77	-0.5
2,954,019	+		IAI47_13970	0.77	+0.4
2,954,020	-		IAI47_13970	0.77	-0.9
2,954,020	-		IAI47_13970	0.77	+0.7
2,954,020	-		IAI47_13970	0.77	-0.7
2,954,020	-		IAI47_13970	0.77	-0.1
2,954,065	+		IAI47_13970	0.82	-1.0
2,954,065	+		IAI47_13970	0.82	-0.8
2,954,065	+		IAI47_13970	0.82	+1.0
2,954,066	-		IAI47_13970	0.82	+1.1
2,954,120	+		IAI47_13970	0.88	+0.1
2,954,120	+		IAI47_13970	0.88	+0.3
2,954,120	+		IAI47_13970	0.88	+0.3
2,954,121	-		IAI47_13970	0.88	-1.5
2,954,121	-		IAI47_13970	0.88	+0.8
2,954,138	+		IAI47_13970	0.90	+0.3
2,954,139	-				-1.6
2,954,148	-				+0.1
2,954,295	+				+0.4
2,954,295	+				+1.8
2,954,295	+				+0.1
2,954,295	+				+0.2
2,954,295	+				-1.3
2,954,296	-				-1.0
2,954,296	-				-0.4
2,954,296	-				+2.0
2,954,303	+				-1.2
2,954,303	+				-1.4
2,954,303	+				+0.4
2,954,303	+				-0.2
2,954,303	+				+0.5
2,954,304	-				+0.1
2,954,326	+				+1.3
2,954,326	+				+0.8
2,954,326	+				-0.8
2,954,326	+				-0.0
2,954,326	+				-0.2
2,954,326	+				-1.4
2,954,326	+				-0.2
2,954,326	+				-1.6
2,954,326	+				-1.2
2,954,326	+				-2.0
2,954,326	+				-0.1
2,954,326	+				-1.8
2,954,326	+				-0.4
2,954,326	+				-0.4
2,954,326	+				+0.7
2,954,326	+				+1.6
2,954,326	+				-0.2
2,954,326	+				-0.0
2,954,326	+				-0.8
2,954,326	+				+1.5
2,954,326	+				+0.6
2,954,326	+				-0.2
2,954,326	+				+2.8
2,954,326	+				-1.0
2,954,326	+				-2.0
2,954,326	+				-0.2
2,954,326	+				+0.2
2,954,327	-				-0.5
2,954,327	-				-0.9
2,954,327	-				-0.6
2,954,327	-				+0.3
2,954,327	-				+0.5
2,954,327	-				+1.0
2,954,327	-				-0.3
2,954,327	-				+1.1
2,954,327	-				-0.6
2,954,327	-				-0.8
2,954,327	-				+0.1
2,954,327	-				-0.8
2,954,327	-				-1.1
2,954,327	-				+3.0
2,954,327	-				-1.3
2,954,327	-				+0.4
2,954,327	-				+2.1
2,954,327	-				-0.4
2,954,330	+				+0.8
2,954,330	+				+0.6
2,954,330	+				+0.8
2,954,330	+				+0.4
2,954,330	+				+1.4
2,954,330	+				+0.8
2,954,331	-				+0.5
2,954,331	-				-0.5
2,954,331	-				-0.6
2,954,331	-				+0.6
2,954,331	-				+0.5
2,954,331	-				-0.2
2,954,363	+				+0.6
2,954,363	+				-2.0
2,954,365	+				-0.2
2,954,365	+				-0.3
2,954,365	+				-0.1
2,954,365	+				+0.5
2,954,366	-				+0.5
2,954,366	-				+1.9
2,954,366	-				+1.6
2,954,454	+				+0.6
2,954,454	+				+0.1
2,954,455	-				-0.6
2,954,482	-				-0.9
2,954,486	+				+0.7
2,954,486	+				-1.2
2,954,486	+				-1.7
2,954,486	+				+2.7
2,954,486	+				+0.3
2,954,486	+				-1.3
2,954,486	+				+0.6
2,954,486	+				-0.9
2,954,486	+				+2.7
2,954,486	+				+1.4
2,954,486	+				-2.1
2,954,486	+				-1.1
2,954,486	+				-2.2
2,954,486	+				+1.0
2,954,486	+				+0.6
2,954,486	+				-0.6
2,954,486	+				+1.1
2,954,486	+				-0.9
2,954,486	+				+1.6
2,954,486	+				+1.0
2,954,486	+				+0.5
2,954,487	-				-0.4
2,954,487	-				+2.0
2,954,487	-				-1.1
2,954,487	-				+0.1
2,954,487	-				+0.3
2,954,487	-				+0.2
2,954,487	-				-1.6
2,954,487	-				+1.8
2,954,487	-				-0.6
2,954,487	-				-0.2
2,954,490	+				-0.3
2,954,491	-				+1.9
2,954,514	-				-0.0
2,954,539	+				-0.5
2,954,539	+				-0.0
2,954,540	-				-0.4
2,954,540	-				-2.1
2,954,540	-				-0.0
2,954,540	-				-0.6
2,954,574	+				-0.5
2,954,574	+				+1.5
2,954,574	+				+0.5
2,954,612	-		IAI47_13975	0.13	+1.6
2,954,715	+		IAI47_13975	0.27	+0.3
2,954,715	+		IAI47_13975	0.27	-0.7
2,954,715	+		IAI47_13975	0.27	+3.0
2,954,715	+		IAI47_13975	0.27	+0.2
2,954,715	+		IAI47_13975	0.27	-2.0
2,954,715	+		IAI47_13975	0.27	-0.7
2,954,715	+		IAI47_13975	0.27	+0.8
2,954,716	-		IAI47_13975	0.27	+0.1
2,954,716	-		IAI47_13975	0.27	-1.3
2,954,716	-		IAI47_13975	0.27	+0.7
2,954,716	-		IAI47_13975	0.27	+0.8
2,954,716	-		IAI47_13975	0.27	+0.7
2,954,716	-		IAI47_13975	0.27	+0.1
2,954,716	-		IAI47_13975	0.27	-0.3
2,954,716	-		IAI47_13975	0.27	+0.6
2,954,716	-		IAI47_13975	0.27	+0.8
2,954,732	+		IAI47_13975	0.29	+0.3
2,954,733	-		IAI47_13975	0.30	-0.4
2,954,733	-		IAI47_13975	0.30	-0.3
2,954,733	-		IAI47_13975	0.30	+2.8
2,954,766	+		IAI47_13975	0.34	+0.7
2,954,766	+		IAI47_13975	0.34	-0.7
2,954,766	+		IAI47_13975	0.34	-1.2
2,954,767	-		IAI47_13975	0.34	+1.0
2,954,767	-		IAI47_13975	0.34	-0.3
2,954,813	+		IAI47_13975	0.40	-1.3
2,954,813	+		IAI47_13975	0.40	-0.7
2,954,813	+		IAI47_13975	0.40	-1.9
2,954,814	-		IAI47_13975	0.40	-1.7
2,954,814	-		IAI47_13975	0.40	+1.2
2,954,814	-		IAI47_13975	0.40	-0.7
2,954,962	+		IAI47_13975	0.60	-2.3
2,954,962	+		IAI47_13975	0.60	+2.6
2,954,979	+		IAI47_13975	0.63	-0.9
2,954,979	+		IAI47_13975	0.63	+0.6
2,954,979	+		IAI47_13975	0.63	+1.3
2,954,980	-		IAI47_13975	0.63	+2.3
2,954,980	-		IAI47_13975	0.63	-2.1
2,954,985	+		IAI47_13975	0.64	+0.9
2,954,985	+		IAI47_13975	0.64	+0.6
2,954,985	+		IAI47_13975	0.64	+0.0
2,954,985	+		IAI47_13975	0.64	+1.4
2,954,985	+		IAI47_13975	0.64	+1.8
2,954,985	+		IAI47_13975	0.64	+2.8
2,954,985	+		IAI47_13975	0.64	+0.7
2,954,986	-		IAI47_13975	0.64	+0.7
2,954,986	-		IAI47_13975	0.64	+0.6
2,954,986	-		IAI47_13975	0.64	+1.4
2,954,989	+		IAI47_13975	0.64	+0.3
2,954,989	+		IAI47_13975	0.64	-1.7
2,954,989	+		IAI47_13975	0.64	+0.1
2,954,989	+		IAI47_13975	0.64	+1.1
2,954,989	+		IAI47_13975	0.64	-1.2
2,954,989	+		IAI47_13975	0.64	+0.8
2,954,989	+		IAI47_13975	0.64	+1.7
2,954,989	+		IAI47_13975	0.64	-1.9
2,954,989	+		IAI47_13975	0.64	+1.4
2,954,989	+		IAI47_13975	0.64	-0.7
2,954,990	-		IAI47_13975	0.64	-0.6
2,954,990	-		IAI47_13975	0.64	+0.1
2,954,990	-		IAI47_13975	0.64	-0.7
2,954,990	-		IAI47_13975	0.64	+0.3
2,954,990	-		IAI47_13975	0.64	+1.0
2,954,990	-		IAI47_13975	0.64	-0.6
2,954,990	-		IAI47_13975	0.64	-0.9
2,954,990	-		IAI47_13975	0.64	+0.4
2,954,990	-		IAI47_13975	0.64	+0.9
2,954,990	-		IAI47_13975	0.64	-1.4
2,954,990	-		IAI47_13975	0.64	-1.7
2,954,990	-		IAI47_13975	0.64	+0.6
2,954,990	-		IAI47_13975	0.64	-1.2
2,954,990	-		IAI47_13975	0.64	-0.4
2,954,990	-		IAI47_13975	0.64	-0.3
2,955,138	+		IAI47_13975	0.84	-1.2
2,955,138	+		IAI47_13975	0.84	+0.6
2,955,139	-		IAI47_13975	0.84	-0.9
2,955,139	-		IAI47_13975	0.84	-0.9
2,955,168	+		IAI47_13975	0.88	+0.5
2,955,169	-		IAI47_13975	0.88	-1.4
2,955,169	-		IAI47_13975	0.88	-0.4
2,955,191	+				+1.0
2,955,191	+				+0.3
2,955,191	+				+0.9
2,955,191	+				+0.7
2,955,191	+				-0.6
2,955,192	-				-0.2
2,955,192	-				+0.8
2,955,192	-				+0.2
2,955,192	-				-0.7
2,955,192	-				+1.1
2,955,192	-				+1.4
2,955,192	-				-0.8