Strain Fitness in Pantoea sp. MT58 around IAI47_13095

Experiment: Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
2,766,379	+		IAI47_13090	0.41	-0.2
2,766,379	+		IAI47_13090	0.41	-0.9
2,766,379	+		IAI47_13090	0.41	-0.6
2,766,380	-		IAI47_13090	0.41	-1.4
2,766,392	-		IAI47_13090	0.42	+0.7
2,766,451	+		IAI47_13090	0.47	+0.7
2,766,451	+		IAI47_13090	0.47	+0.8
2,766,451	+		IAI47_13090	0.47	+0.7
2,766,451	+		IAI47_13090	0.47	+0.7
2,766,452	-		IAI47_13090	0.47	+3.1
2,766,458	-		IAI47_13090	0.47	-1.0
2,766,478	+		IAI47_13090	0.49	+0.4
2,766,478	+		IAI47_13090	0.49	+1.2
2,766,479	-		IAI47_13090	0.49	-0.1
2,766,490	-		IAI47_13090	0.50	+0.1
2,766,535	+		IAI47_13090	0.54	+2.7
2,766,552	+		IAI47_13090	0.55	-0.6
2,766,552	+		IAI47_13090	0.55	+0.2
2,766,552	+		IAI47_13090	0.55	+0.5
2,766,553	-		IAI47_13090	0.55	-0.5
2,766,587	-		IAI47_13090	0.58	-1.2
2,766,587	-		IAI47_13090	0.58	-0.4
2,766,587	-		IAI47_13090	0.58	-1.0
2,766,587	-		IAI47_13090	0.58	+0.3
2,766,587	-		IAI47_13090	0.58	+0.1
2,766,587	-		IAI47_13090	0.58	+0.7
2,766,587	-		IAI47_13090	0.58	+0.8
2,766,587	-		IAI47_13090	0.58	+1.1
2,766,621	+		IAI47_13090	0.61	-0.8
2,766,621	+		IAI47_13090	0.61	+0.5
2,766,621	+		IAI47_13090	0.61	-0.8
2,766,621	+		IAI47_13090	0.61	+0.3
2,766,621	+		IAI47_13090	0.61	-0.7
2,766,621	+		IAI47_13090	0.61	-0.3
2,766,621	+		IAI47_13090	0.61	+2.3
2,766,622	-		IAI47_13090	0.61	-0.2
2,766,622	-		IAI47_13090	0.61	-0.3
2,766,622	-		IAI47_13090	0.61	+0.2
2,766,622	-		IAI47_13090	0.61	-1.1
2,766,622	-		IAI47_13090	0.61	-0.3
2,766,625	+		IAI47_13090	0.61	-0.2
2,766,625	+		IAI47_13090	0.61	-0.5
2,766,625	+		IAI47_13090	0.61	+0.4
2,766,625	+		IAI47_13090	0.61	-0.8
2,766,625	+		IAI47_13090	0.61	+0.4
2,766,626	-		IAI47_13090	0.61	-1.3
2,766,626	-		IAI47_13090	0.61	-1.3
2,766,626	-		IAI47_13090	0.61	+0.1
2,766,626	-		IAI47_13090	0.61	+0.1
2,766,626	-		IAI47_13090	0.61	+1.3
2,766,626	-		IAI47_13090	0.61	-1.5
2,766,626	-		IAI47_13090	0.61	-0.6
2,766,626	-		IAI47_13090	0.61	+1.3
2,766,667	-		IAI47_13090	0.65	+0.4
2,766,667	-		IAI47_13090	0.65	-0.2
2,766,667	-		IAI47_13090	0.65	+1.5
2,766,667	-		IAI47_13090	0.65	+0.4
2,766,667	-		IAI47_13090	0.65	-0.4
2,766,718	+		IAI47_13090	0.69	-0.8
2,766,718	+		IAI47_13090	0.69	+0.3
2,766,719	-		IAI47_13090	0.69	+0.8
2,766,719	-		IAI47_13090	0.69	-1.0
2,766,784	+		IAI47_13090	0.74	+0.8
2,766,784	+		IAI47_13090	0.74	+0.0
2,766,784	+		IAI47_13090	0.74	+0.0
2,766,785	-		IAI47_13090	0.74	+0.5
2,766,853	+		IAI47_13090	0.80	-0.6
2,766,853	+		IAI47_13090	0.80	+0.8
2,766,853	+		IAI47_13090	0.80	+0.3
2,766,853	+		IAI47_13090	0.80	+0.5
2,766,853	+		IAI47_13090	0.80	-1.2
2,766,853	+		IAI47_13090	0.80	-0.3
2,766,854	-		IAI47_13090	0.80	-1.1
2,766,854	-		IAI47_13090	0.80	+0.9
2,766,854	-		IAI47_13090	0.80	+2.1
2,766,854	-				+1.4
2,766,854	-		IAI47_13090	0.80	+0.2
2,766,873	+		IAI47_13090	0.82	-0.9
2,766,873	+		IAI47_13090	0.82	-0.3
2,766,873	+		IAI47_13090	0.82	+0.1
2,766,873	+		IAI47_13090	0.82	-0.4
2,766,874	-		IAI47_13090	0.82	-1.3
2,766,874	-		IAI47_13090	0.82	+1.4
2,766,874	-		IAI47_13090	0.82	+0.6
2,766,874	-		IAI47_13090	0.82	-0.6
2,766,874	-		IAI47_13090	0.82	+0.8
2,766,889	+		IAI47_13090	0.83	-0.9
2,766,890	-		IAI47_13090	0.83	-0.6
2,766,890	-		IAI47_13090	0.83	-0.9
2,766,944	-		IAI47_13090	0.88	-0.2
2,766,955	-		IAI47_13090	0.88	-1.6
2,766,976	+				-0.7
2,766,976	+				-0.2
2,766,977	-				+2.2
2,766,977	-				-0.9
2,766,977	-				+0.4
2,767,040	+				-0.4
2,767,041	-				+1.5
2,767,041	-				+0.0
2,767,117	+				+1.2
2,767,117	+				-0.7
2,767,117	+				-0.7
2,767,118	-				+0.2
2,767,158	+				+0.3
2,767,159	-				+0.2
2,767,219	+				+0.1
2,767,219	+				-0.3
2,767,311	-				-1.5
2,767,325	+				-1.1
2,767,325	+				-0.6
2,767,326	-				+1.0
2,767,332	+				+2.1
2,767,373	+				+0.3
2,767,373	+				-0.5
2,767,373	+				-0.4
2,767,374	-				+0.8
2,767,442	+		IAI47_13095	0.12	+0.3
2,767,442	+		IAI47_13095	0.12	+1.4
2,767,490	+		IAI47_13095	0.19	-1.9
2,767,490	+		IAI47_13095	0.19	+1.4
2,767,491	-		IAI47_13095	0.19	-1.7
2,767,491	-		IAI47_13095	0.19	-0.1
2,767,501	+		IAI47_13095	0.21	-0.5
2,767,501	+		IAI47_13095	0.21	-0.5
2,767,501	+		IAI47_13095	0.21	+1.7
2,767,502	-		IAI47_13095	0.21	+0.5
2,767,502	-		IAI47_13095	0.21	+0.1
2,767,502	-		IAI47_13095	0.21	+0.4
2,767,502	-		IAI47_13095	0.21	-2.2
2,767,502	-		IAI47_13095	0.21	-0.8
2,767,502	-		IAI47_13095	0.21	-0.6
2,767,502	-		IAI47_13095	0.21	-2.1
2,767,504	+		IAI47_13095	0.21	-1.3
2,767,504	+		IAI47_13095	0.21	+1.2
2,767,504	+		IAI47_13095	0.21	-1.4
2,767,504	+		IAI47_13095	0.21	-1.0
2,767,505	-		IAI47_13095	0.21	-1.9
2,767,505	-		IAI47_13095	0.21	-0.7
2,767,505	-		IAI47_13095	0.21	+0.5
2,767,505	-		IAI47_13095	0.21	-0.5
2,767,505	-		IAI47_13095	0.21	+0.4
2,767,531	+		IAI47_13095	0.25	+0.8
2,767,531	+		IAI47_13095	0.25	+0.1
2,767,531	+		IAI47_13095	0.25	-0.5
2,767,531	+		IAI47_13095	0.25	-0.2
2,767,532	-		IAI47_13095	0.25	-0.3
2,767,532	-		IAI47_13095	0.25	+0.3
2,767,532	-		IAI47_13095	0.25	-0.8
2,767,532	-		IAI47_13095	0.25	+3.3
2,767,533	+		IAI47_13095	0.25	-0.3
2,767,533	+		IAI47_13095	0.25	-0.7
2,767,533	+		IAI47_13095	0.25	-1.0
2,767,533	+		IAI47_13095	0.25	+2.2
2,767,534	-		IAI47_13095	0.26	-0.1
2,767,534	-		IAI47_13095	0.26	-0.2
2,767,535	-		IAI47_13095	0.26	-1.6
2,767,539	+		IAI47_13095	0.26	+1.6
2,767,539	+		IAI47_13095	0.26	-1.3
2,767,539	+		IAI47_13095	0.26	-0.7
2,767,539	+		IAI47_13095	0.26	-2.2
2,767,539	+		IAI47_13095	0.26	-1.1
2,767,540	-		IAI47_13095	0.26	+0.7
2,767,540	-		IAI47_13095	0.26	+1.5
2,767,540	-		IAI47_13095	0.26	+0.1
2,767,540	-		IAI47_13095	0.26	-3.1
2,767,540	-		IAI47_13095	0.26	-1.6
2,767,540	-		IAI47_13095	0.26	+0.8
2,767,631	-		IAI47_13095	0.40	-2.2
2,767,631	-		IAI47_13095	0.40	+0.2
2,767,631	-		IAI47_13095	0.40	+0.3
2,767,786	+		IAI47_13095	0.64	-0.6
2,767,786	+		IAI47_13095	0.64	+0.6
2,767,786	+		IAI47_13095	0.64	-1.3
2,767,801	+		IAI47_13095	0.66	+1.9
2,767,802	-		IAI47_13095	0.66	-0.4
2,767,802	-		IAI47_13095	0.66	-0.6
2,767,816	+		IAI47_13095	0.68	-0.6
2,767,816	+		IAI47_13095	0.68	+1.0
2,767,816	+		IAI47_13095	0.68	+0.6
2,767,816	+		IAI47_13095	0.68	-1.7
2,767,816	+		IAI47_13095	0.68	+0.9
2,767,817	-		IAI47_13095	0.69	+1.4
2,767,817	-		IAI47_13095	0.69	-0.4
2,767,817	-		IAI47_13095	0.69	-0.8
2,767,817	-		IAI47_13095	0.69	+0.2
2,767,817	-		IAI47_13095	0.69	-0.3
2,767,818	+		IAI47_13095	0.69	-0.9
2,767,818	+		IAI47_13095	0.69	-2.8
2,767,818	+		IAI47_13095	0.69	-0.5
2,767,818	+		IAI47_13095	0.69	-0.4
2,767,818	+		IAI47_13095	0.69	-0.6
2,767,894	+		IAI47_13095	0.80	-0.5
2,767,894	+		IAI47_13095	0.80	-0.0
2,767,894	+		IAI47_13095	0.80	-0.1
2,767,895	-		IAI47_13095	0.81	+1.4
2,767,895	-		IAI47_13095	0.81	-0.8
2,767,895	-		IAI47_13095	0.81	-1.0
2,767,895	-		IAI47_13095	0.81	+0.6
2,767,970	+				-0.3
2,768,005	+				+1.1
2,768,005	+				+0.2
2,768,006	-				+0.0
2,768,006	-				+0.2
2,768,047	-				-0.5
2,768,047	-				+0.3
2,768,095	+				-0.2
2,768,095	+				+1.4
2,768,095	+				+0.5
2,768,095	+				-0.0
2,768,096	-				-0.5
2,768,096	-				+0.9
2,768,137	+				+0.5
2,768,137	+				-2.6
2,768,162	+				+0.9
2,768,191	+				-1.6
2,768,191	+				+0.4
2,768,237	+				+1.8
2,768,237	+				+0.6
2,768,237	+				+0.9
2,768,237	+				-0.0
2,768,237	+				+0.2
2,768,237	+				+0.3
2,768,238	-				+0.9
2,768,238	-				+2.7
2,768,238	-				-0.8
2,768,238	-				-0.1
2,768,238	-				-0.3
2,768,238	-				-0.9
2,768,238	-				-0.5
2,768,238	-				-0.4
2,768,238	-				-2.1
2,768,238	-				+0.8
2,768,238	-				-0.4
2,768,238	-				-0.5
2,768,238	-				+0.1
2,768,238	-				-0.6
2,768,238	-				-0.3
2,768,243	+				+1.5
2,768,244	-				-0.5
2,768,244	-				+1.0
2,768,244	-				-1.3
2,768,328	+		IAI47_13100	0.14	+0.3
2,768,328	+		IAI47_13100	0.14	+0.6
2,768,331	+		IAI47_13100	0.15	+0.6
2,768,331	+		IAI47_13100	0.15	+1.7
2,768,331	+		IAI47_13100	0.15	-0.6
2,768,331	+		IAI47_13100	0.15	-1.8
2,768,332	-		IAI47_13100	0.15	+1.7
2,768,332	-		IAI47_13100	0.15	+0.7
2,768,332	-		IAI47_13100	0.15	+1.1
2,768,374	+		IAI47_13100	0.18	-0.3
2,768,409	+		IAI47_13100	0.21	+1.9
2,768,409	+		IAI47_13100	0.21	+0.6
2,768,409	+		IAI47_13100	0.21	+1.1
2,768,411	+		IAI47_13100	0.22	+1.4
2,768,453	+		IAI47_13100	0.25	+1.3
2,768,453	+		IAI47_13100	0.25	-0.1
2,768,516	+		IAI47_13100	0.31	-0.1
2,768,516	+		IAI47_13100	0.31	-2.5
2,768,516	+		IAI47_13100	0.31	-0.2
2,768,516	+		IAI47_13100	0.31	-0.5
2,768,517	-		IAI47_13100	0.31	+0.3
2,768,517	-		IAI47_13100	0.31	-0.2
2,768,517	-		IAI47_13100	0.31	-1.0
2,768,517	-		IAI47_13100	0.31	+0.7
2,768,517	-		IAI47_13100	0.31	-0.7
2,768,517	-		IAI47_13100	0.31	+0.7
2,768,517	-		IAI47_13100	0.31	+1.4
2,768,517	-		IAI47_13100	0.31	+0.8
2,768,528	+		IAI47_13100	0.32	+1.2
2,768,529	-		IAI47_13100	0.32	-1.2
2,768,549	+		IAI47_13100	0.34	+1.0
2,768,549	+		IAI47_13100	0.34	+0.8
2,768,571	+		IAI47_13100	0.35	-0.9
2,768,571	+		IAI47_13100	0.35	+0.2
2,768,571	+		IAI47_13100	0.35	-0.5
2,768,571	+		IAI47_13100	0.35	-0.6
2,768,572	-		IAI47_13100	0.36	+0.4
2,768,614	+		IAI47_13100	0.39	+1.3
2,768,614	+		IAI47_13100	0.39	+0.4
2,768,656	-		IAI47_13100	0.43	-0.0
2,768,666	+		IAI47_13100	0.44	+0.8
2,768,666	+		IAI47_13100	0.44	-0.9
2,768,666	+		IAI47_13100	0.44	+0.1
2,768,666	+		IAI47_13100	0.44	-0.8
2,768,667	-		IAI47_13100	0.44	-0.2
2,768,667	-		IAI47_13100	0.44	+0.1
2,768,667	-		IAI47_13100	0.44	+0.7
2,768,766	+		IAI47_13100	0.52	+0.5
2,768,822	+		IAI47_13100	0.57	+0.2
2,768,822	+		IAI47_13100	0.57	+1.7
2,768,822	+		IAI47_13100	0.57	-0.0
2,768,823	-		IAI47_13100	0.57	+1.7
2,768,823	-		IAI47_13100	0.57	-1.3
2,768,922	+		IAI47_13100	0.66	+0.4
2,768,923	-		IAI47_13100	0.66	+0.8
2,768,950	+		IAI47_13100	0.68	-1.4
2,768,987	+		IAI47_13100	0.72	+1.7