Strain Fitness in Pantoea sp. MT58 around IAI47_13015

Experiment: Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
2,751,149	+		IAI47_13005	0.72	-0.7
2,751,150	-		IAI47_13005	0.72	-0.6
2,751,156	+		IAI47_13005	0.73	-1.1
2,751,210	+		IAI47_13005	0.81	+0.1
2,751,210	+		IAI47_13005	0.81	-1.6
2,751,210	+		IAI47_13005	0.81	-1.1
2,751,210	+		IAI47_13005	0.81	+0.6
2,751,211	-		IAI47_13005	0.81	+2.3
2,751,211	-		IAI47_13005	0.81	+0.3
2,751,211	-		IAI47_13005	0.81	+1.5
2,751,211	-		IAI47_13005	0.81	+0.2
2,751,211	-		IAI47_13005	0.81	+0.2
2,751,217	-		IAI47_13005	0.82	+0.5
2,751,237	+		IAI47_13005	0.84	+0.9
2,751,238	-		IAI47_13005	0.85	-0.4
2,751,266	-		IAI47_13005	0.88	-0.8
2,751,276	+		IAI47_13005	0.90	-0.4
2,751,276	+		IAI47_13005	0.90	-0.8
2,751,276	+		IAI47_13005	0.90	+1.2
2,751,276	+		IAI47_13005	0.90	-2.2
2,751,277	-				-1.5
2,751,277	-				-0.3
2,751,277	-				-1.1
2,751,277	-				+1.1
2,751,277	-				-0.7
2,751,357	+				-1.1
2,751,357	+				-1.2
2,751,358	-				+1.6
2,751,358	-				+1.6
2,751,479	+		IAI47_13010	0.20	-0.8
2,751,480	-		IAI47_13010	0.20	-0.4
2,751,480	-		IAI47_13010	0.20	+2.6
2,751,500	+		IAI47_13010	0.23	+0.3
2,751,501	-		IAI47_13010	0.23	-1.9
2,751,501	-		IAI47_13010	0.23	+2.8
2,751,501	-		IAI47_13010	0.23	-1.4
2,751,549	+		IAI47_13010	0.30	-1.2
2,751,549	+		IAI47_13010	0.30	-0.2
2,751,549	+		IAI47_13010	0.30	+0.9
2,751,549	+		IAI47_13010	0.30	+0.3
2,751,549	+		IAI47_13010	0.30	-1.1
2,751,550	-		IAI47_13010	0.30	-0.3
2,751,550	-		IAI47_13010	0.30	-0.4
2,751,552	+		IAI47_13010	0.30	+0.1
2,751,553	-		IAI47_13010	0.31	+0.8
2,751,660	+		IAI47_13010	0.47	+0.4
2,751,661	-		IAI47_13010	0.47	+0.2
2,751,661	-		IAI47_13010	0.47	+0.5
2,751,661	-		IAI47_13010	0.47	-0.3
2,751,679	-		IAI47_13010	0.49	+0.6
2,751,771	+		IAI47_13010	0.63	-0.0
2,751,771	+		IAI47_13010	0.63	-0.5
2,751,771	+		IAI47_13010	0.63	-0.2
2,751,772	-		IAI47_13010	0.63	+2.4
2,751,780	-		IAI47_13010	0.65	+0.8
2,751,780	-		IAI47_13010	0.65	-0.3
2,751,798	+		IAI47_13010	0.67	-2.8
2,751,798	+		IAI47_13010	0.67	+0.2
2,751,799	-		IAI47_13010	0.67	+0.3
2,751,799	-		IAI47_13010	0.67	+1.2
2,751,799	-		IAI47_13010	0.67	-0.1
2,751,799	-		IAI47_13010	0.67	-0.2
2,751,824	+		IAI47_13010	0.71	+0.1
2,751,825	-		IAI47_13010	0.71	+0.5
2,751,843	+		IAI47_13010	0.74	-0.2
2,751,843	+		IAI47_13010	0.74	-0.2
2,751,843	+		IAI47_13010	0.74	-0.1
2,751,843	+		IAI47_13010	0.74	+0.1
2,751,888	+		IAI47_13010	0.81	-1.0
2,751,889	-		IAI47_13010	0.81	-0.6
2,751,900	+		IAI47_13010	0.83	+0.9
2,751,900	+		IAI47_13010	0.83	-0.4
2,751,900	+		IAI47_13010	0.83	+1.1
2,751,900	+		IAI47_13010	0.83	-0.8
2,751,900	+		IAI47_13010	0.83	+0.5
2,751,901	-		IAI47_13010	0.83	-2.2
2,751,901	-		IAI47_13010	0.83	+0.2
2,751,901	-		IAI47_13010	0.83	+1.0
2,751,901	-		IAI47_13010	0.83	+0.7
2,751,901	-		IAI47_13010	0.83	+0.8
2,751,910	-		IAI47_13010	0.84	+1.4
2,751,915	+		IAI47_13010	0.85	-1.1
2,751,916	-		IAI47_13010	0.85	+0.3
2,751,916	-		IAI47_13010	0.85	-0.7
2,751,916	-		IAI47_13010	0.85	+1.2
2,751,916	-		IAI47_13010	0.85	+0.3
2,751,936	+		IAI47_13010	0.88	+3.9
2,751,956	-				-1.4
2,752,010	+				+2.1
2,752,062	-				-0.3
2,752,092	+				-0.6
2,752,092	+				+1.0
2,752,092	+				-0.2
2,752,092	+				-0.1
2,752,093	-				+0.4
2,752,128	+				+0.1
2,752,146	+				-0.3
2,752,147	-				+1.2
2,752,170	+				-1.9
2,752,170	+				+0.8
2,752,170	+				-0.1
2,752,171	-				+2.4
2,752,171	-				+2.0
2,752,171	-				+0.5
2,752,171	-				+1.8
2,752,222	+		IAI47_13015	0.12	-0.4
2,752,222	+		IAI47_13015	0.12	-0.7
2,752,222	+		IAI47_13015	0.12	-0.4
2,752,222	+		IAI47_13015	0.12	-0.1
2,752,222	+		IAI47_13015	0.12	+1.0
2,752,223	-		IAI47_13015	0.12	+1.1
2,752,223	-		IAI47_13015	0.12	-1.0
2,752,223	-		IAI47_13015	0.12	-1.1
2,752,223	-		IAI47_13015	0.12	+1.2
2,752,254	+		IAI47_13015	0.17	-2.0
2,752,255	-		IAI47_13015	0.17	+0.9
2,752,255	-		IAI47_13015	0.17	+0.2
2,752,323	+		IAI47_13015	0.26	+1.8
2,752,324	-		IAI47_13015	0.26	-0.9
2,752,431	+		IAI47_13015	0.41	-1.2
2,752,441	+		IAI47_13015	0.42	-1.2
2,752,441	+		IAI47_13015	0.42	-0.9
2,752,442	-		IAI47_13015	0.42	+1.1
2,752,442	-		IAI47_13015	0.42	-0.9
2,752,442	-		IAI47_13015	0.42	-0.5
2,752,444	+		IAI47_13015	0.43	-1.9
2,752,444	+		IAI47_13015	0.43	+1.2
2,752,445	-		IAI47_13015	0.43	+2.4
2,752,445	-		IAI47_13015	0.43	-1.6
2,752,445	-		IAI47_13015	0.43	+1.1
2,752,449	+		IAI47_13015	0.43	+0.2
2,752,449	+		IAI47_13015	0.43	+0.6
2,752,489	-		IAI47_13015	0.49	+2.0
2,752,560	+		IAI47_13015	0.58	-1.2
2,752,560	+		IAI47_13015	0.58	+0.2
2,752,560	+		IAI47_13015	0.58	-0.4
2,752,561	-		IAI47_13015	0.59	-0.5
2,752,561	-		IAI47_13015	0.59	-0.6
2,752,561	-		IAI47_13015	0.59	-0.3
2,752,580	+		IAI47_13015	0.61	+1.1
2,752,580	+		IAI47_13015	0.61	+1.1
2,752,581	-		IAI47_13015	0.61	-0.2
2,752,581	-		IAI47_13015	0.61	+3.1
2,752,581	-		IAI47_13015	0.61	+0.2
2,752,588	+		IAI47_13015	0.62	-1.3
2,752,589	-		IAI47_13015	0.62	-0.1
2,752,589	-		IAI47_13015	0.62	-0.6
2,752,589	-		IAI47_13015	0.62	-0.6
2,752,589	-		IAI47_13015	0.62	+1.0
2,752,597	+		IAI47_13015	0.64	-1.3
2,752,597	+		IAI47_13015	0.64	-0.2
2,752,598	-		IAI47_13015	0.64	+0.4
2,752,598	-		IAI47_13015	0.64	+1.2
2,752,729	+		IAI47_13015	0.82	-0.7
2,752,730	-		IAI47_13015	0.82	-0.8
2,752,730	-		IAI47_13015	0.82	+2.9
2,752,730	-		IAI47_13015	0.82	-1.3
2,752,767	+		IAI47_13015	0.87	+0.5
2,752,767	+		IAI47_13015	0.87	+0.1
2,752,767	+		IAI47_13015	0.87	+1.6
2,752,767	+		IAI47_13015	0.87	-1.2
2,752,767	+		IAI47_13015	0.87	+0.4
2,752,768	-		IAI47_13015	0.87	+0.2
2,752,768	-		IAI47_13015	0.87	+1.1
2,752,768	-		IAI47_13015	0.87	-0.3
2,752,839	+				+1.0
2,752,839	+				-2.3
2,752,840	-				-0.6
2,752,840	-				+0.0
2,752,845	+				+2.7
2,752,845	+				+1.6
2,752,845	+				-1.0
2,752,845	+				+0.4
2,752,845	+				-0.7
2,752,845	+				-0.7
2,752,845	+				+0.3
2,752,846	-				+1.5
2,752,846	-				-0.0
2,752,846	-				-2.1
2,752,846	-				-1.3
2,752,861	+				+1.0
2,752,862	-				-1.9
2,752,902	+				-0.5
2,752,931	+				+1.7
2,752,943	+				+0.2
2,752,943	+				-0.1
2,752,943	+				-0.2
2,752,944	-				+1.3
2,752,944	-				+1.0
2,752,944	-				-0.5
2,752,973	-				+0.9
2,752,973	-				+2.1
2,753,015	+		IAI47_13020	0.12	+2.6
2,753,016	-		IAI47_13020	0.12	-0.2
2,753,016	-		IAI47_13020	0.12	-0.3
2,753,016	-		IAI47_13020	0.12	+0.9
2,753,026	+		IAI47_13020	0.13	-0.4
2,753,027	-		IAI47_13020	0.13	+1.5
2,753,035	+		IAI47_13020	0.14	-2.6
2,753,035	+		IAI47_13020	0.14	-0.9
2,753,035	+		IAI47_13020	0.14	-0.9
2,753,036	-		IAI47_13020	0.14	+0.9
2,753,036	-		IAI47_13020	0.14	-1.9
2,753,059	+		IAI47_13020	0.16	+1.6
2,753,059	+		IAI47_13020	0.16	+0.4
2,753,059	+		IAI47_13020	0.16	-1.9
2,753,060	-		IAI47_13020	0.16	-0.7
2,753,060	-		IAI47_13020	0.16	+2.6
2,753,060	-		IAI47_13020	0.16	+4.1
2,753,060	-		IAI47_13020	0.16	-0.4
2,753,148	-		IAI47_13020	0.24	-0.9
2,753,148	-		IAI47_13020	0.24	+0.6
2,753,213	+		IAI47_13020	0.30	+1.7
2,753,228	+		IAI47_13020	0.31	-0.3
2,753,228	+		IAI47_13020	0.31	-0.2
2,753,229	-		IAI47_13020	0.31	-0.0
2,753,287	-		IAI47_13020	0.36	+0.1
2,753,309	+		IAI47_13020	0.38	+2.6
2,753,309	+		IAI47_13020	0.38	+0.3
2,753,309	+		IAI47_13020	0.38	-1.9
2,753,309	+		IAI47_13020	0.38	-0.1
2,753,309	+		IAI47_13020	0.38	+0.9
2,753,310	-		IAI47_13020	0.38	-1.0
2,753,310	-		IAI47_13020	0.38	+1.1
2,753,310	-		IAI47_13020	0.38	+0.5
2,753,310	-		IAI47_13020	0.38	+3.0
2,753,310	-		IAI47_13020	0.38	-1.3
2,753,310	-		IAI47_13020	0.38	-0.0
2,753,310	-		IAI47_13020	0.38	+1.4
2,753,310	-		IAI47_13020	0.38	+0.1
2,753,310	-		IAI47_13020	0.38	-0.0
2,753,310	-		IAI47_13020	0.38	-0.5
2,753,310	-		IAI47_13020	0.38	+0.4
2,753,315	+		IAI47_13020	0.39	-1.3
2,753,353	+		IAI47_13020	0.42	-0.0
2,753,353	+		IAI47_13020	0.42	+2.4
2,753,354	-		IAI47_13020	0.42	+1.6
2,753,354	-		IAI47_13020	0.42	+3.0
2,753,354	-		IAI47_13020	0.42	+0.1
2,753,489	+		IAI47_13020	0.54	+1.7
2,753,490	-		IAI47_13020	0.54	+0.4
2,753,490	-		IAI47_13020	0.54	-0.4
2,753,504	+		IAI47_13020	0.55	+1.2
2,753,579	+		IAI47_13020	0.62	+1.0
2,753,580	-		IAI47_13020	0.62	+1.9
2,753,633	+		IAI47_13020	0.66	-0.4
2,753,633	+		IAI47_13020	0.66	+0.1
2,753,634	-		IAI47_13020	0.67	+0.4
2,753,663	+		IAI47_13020	0.69	+1.1
2,753,663	+		IAI47_13020	0.69	-0.6
2,753,664	-		IAI47_13020	0.69	+0.2
2,753,675	+		IAI47_13020	0.70	+0.5
2,753,676	-		IAI47_13020	0.70	-2.3
2,753,677	+		IAI47_13020	0.70	-1.3
2,753,677	+		IAI47_13020	0.70	+0.1
2,753,677	+		IAI47_13020	0.70	+0.5
2,753,677	+		IAI47_13020	0.70	+0.9
2,753,678	-		IAI47_13020	0.70	-0.7
2,753,678	-		IAI47_13020	0.70	+0.4
2,753,678	-		IAI47_13020	0.70	-1.1
2,753,702	+		IAI47_13020	0.73	+0.6
2,753,702	+		IAI47_13020	0.73	+0.4
2,753,703	-		IAI47_13020	0.73	-0.9
2,753,712	+		IAI47_13020	0.73	+2.1
2,753,713	-		IAI47_13020	0.74	-1.3
2,753,721	-		IAI47_13020	0.74	-2.1
2,753,747	-		IAI47_13020	0.76	+0.5