Strain Fitness in Pantoea sp. MT58 around IAI47_16310

Experiment: Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
3,456,327	+		IAI47_16305	0.11	-0.4
3,456,327	+		IAI47_16305	0.11	-1.1
3,456,327	+		IAI47_16305	0.11	+0.5
3,456,327	+		IAI47_16305	0.11	-0.1
3,456,327	+		IAI47_16305	0.11	-0.5
3,456,327	+		IAI47_16305	0.11	-0.5
3,456,328	-		IAI47_16305	0.12	+0.8
3,456,328	-		IAI47_16305	0.12	+1.0
3,456,328	-		IAI47_16305	0.12	-0.8
3,456,329	+		IAI47_16305	0.12	+0.3
3,456,330	-		IAI47_16305	0.12	-1.0
3,456,330	-		IAI47_16305	0.12	+0.6
3,456,330	-		IAI47_16305	0.12	-0.6
3,456,330	-		IAI47_16305	0.12	+0.6
3,456,416	+		IAI47_16305	0.20	-1.1
3,456,416	+		IAI47_16305	0.20	+1.0
3,456,445	+		IAI47_16305	0.23	-0.0
3,456,446	-		IAI47_16305	0.23	-0.4
3,456,446	-		IAI47_16305	0.23	+1.3
3,456,446	-		IAI47_16305	0.23	+0.3
3,456,446	-		IAI47_16305	0.23	+0.8
3,456,458	+		IAI47_16305	0.24	-0.8
3,456,458	+		IAI47_16305	0.24	+1.1
3,456,459	-		IAI47_16305	0.24	+2.7
3,456,481	+		IAI47_16305	0.27	+0.3
3,456,481	+		IAI47_16305	0.27	+0.1
3,456,481	+		IAI47_16305	0.27	+0.9
3,456,482	-		IAI47_16305	0.27	+1.6
3,456,482	-		IAI47_16305	0.27	-2.6
3,456,482	-		IAI47_16305	0.27	+0.2
3,456,527	-		IAI47_16305	0.31	+0.5
3,456,527	-		IAI47_16305	0.31	-1.5
3,456,527	-		IAI47_16305	0.31	+0.3
3,456,560	+		IAI47_16305	0.34	+0.4
3,456,560	+		IAI47_16305	0.34	-0.6
3,456,560	+		IAI47_16305	0.34	-1.7
3,456,560	+		IAI47_16305	0.34	+0.2
3,456,561	-		IAI47_16305	0.35	+0.9
3,456,686	+		IAI47_16305	0.47	+0.2
3,456,686	+		IAI47_16305	0.47	-0.1
3,456,686	+		IAI47_16305	0.47	+1.2
3,456,686	+		IAI47_16305	0.47	-1.7
3,456,686	+		IAI47_16305	0.47	+0.2
3,456,686	+		IAI47_16305	0.47	+1.4
3,456,686	+		IAI47_16305	0.47	-0.7
3,456,686	+		IAI47_16305	0.47	+0.4
3,456,686	+		IAI47_16305	0.47	+0.4
3,456,686	+		IAI47_16305	0.47	+0.2
3,456,687	-		IAI47_16305	0.47	+0.2
3,456,687	-		IAI47_16305	0.47	-0.5
3,456,687	-		IAI47_16305	0.47	+0.2
3,456,687	-		IAI47_16305	0.47	+0.4
3,456,687	-		IAI47_16305	0.47	-0.2
3,456,687	-		IAI47_16305	0.47	-0.4
3,456,687	-		IAI47_16305	0.47	-0.1
3,456,687	-		IAI47_16305	0.47	+1.3
3,456,687	-		IAI47_16305	0.47	+1.4
3,456,687	-		IAI47_16305	0.47	+0.9
3,456,687	-		IAI47_16305	0.47	-0.6
3,456,687	-		IAI47_16305	0.47	-1.3
3,456,733	+		IAI47_16305	0.51	+0.9
3,456,733	+		IAI47_16305	0.51	-0.3
3,456,734	-		IAI47_16305	0.52	-0.7
3,456,734	-		IAI47_16305	0.52	-0.4
3,456,734	-		IAI47_16305	0.52	+1.3
3,456,785	+		IAI47_16305	0.57	+0.3
3,456,785	+		IAI47_16305	0.57	-1.5
3,456,785	+		IAI47_16305	0.57	+1.0
3,456,785	+		IAI47_16305	0.57	+1.0
3,456,786	-		IAI47_16305	0.57	+0.4
3,456,786	-		IAI47_16305	0.57	+1.2
3,456,786	-		IAI47_16305	0.57	-0.2
3,456,804	+		IAI47_16305	0.58	-0.1
3,456,804	+		IAI47_16305	0.58	-2.5
3,456,804	+		IAI47_16305	0.58	-1.4
3,456,804	+		IAI47_16305	0.58	-0.1
3,456,805	-		IAI47_16305	0.59	+1.4
3,456,809	+		IAI47_16305	0.59	+0.8
3,456,809	+		IAI47_16305	0.59	-1.1
3,456,809	+		IAI47_16305	0.59	+0.3
3,456,809	+		IAI47_16305	0.59	-0.2
3,456,809	+		IAI47_16305	0.59	+1.1
3,456,809	+		IAI47_16305	0.59	-1.2
3,456,809	+		IAI47_16305	0.59	+1.7
3,456,809	+		IAI47_16305	0.59	+0.6
3,456,810	-		IAI47_16305	0.59	+0.5
3,456,810	-		IAI47_16305	0.59	+0.6
3,456,810	-		IAI47_16305	0.59	+0.3
3,456,864	+		IAI47_16305	0.64	+0.2
3,456,965	+		IAI47_16305	0.74	+0.1
3,456,965	+		IAI47_16305	0.74	+0.8
3,456,965	+		IAI47_16305	0.74	-1.5
3,456,965	+		IAI47_16305	0.74	+0.3
3,456,965	+		IAI47_16305	0.74	-1.5
3,456,965	+		IAI47_16305	0.74	+1.1
3,456,965	+		IAI47_16305	0.74	-1.4
3,456,965	+		IAI47_16305	0.74	+1.2
3,456,965	+		IAI47_16305	0.74	-0.6
3,456,965	+		IAI47_16305	0.74	+0.6
3,456,965	+		IAI47_16305	0.74	-1.1
3,456,965	+		IAI47_16305	0.74	-1.1
3,456,965	+		IAI47_16305	0.74	-0.1
3,456,965	+		IAI47_16305	0.74	+1.3
3,456,965	+		IAI47_16305	0.74	+0.3
3,456,965	+		IAI47_16305	0.74	-0.5
3,456,965	+		IAI47_16305	0.74	+0.3
3,456,965	+		IAI47_16305	0.74	+0.5
3,456,966	-		IAI47_16305	0.74	-1.6
3,456,966	-		IAI47_16305	0.74	-1.0
3,456,966	-		IAI47_16305	0.74	+2.4
3,456,966	-		IAI47_16305	0.74	-0.4
3,456,966	-		IAI47_16305	0.74	+0.3
3,456,966	-		IAI47_16305	0.74	-0.2
3,456,966	-		IAI47_16305	0.74	-1.8
3,456,966	-		IAI47_16305	0.74	+0.3
3,456,966	-		IAI47_16305	0.74	-1.8
3,456,966	-		IAI47_16305	0.74	+2.3
3,456,966	-		IAI47_16305	0.74	+0.1
3,456,966	-		IAI47_16305	0.74	-0.4
3,456,966	-		IAI47_16305	0.74	-0.3
3,456,969	+		IAI47_16305	0.75	+0.2
3,456,969	+		IAI47_16305	0.75	-0.4
3,456,969	+		IAI47_16305	0.75	-1.0
3,456,969	+		IAI47_16305	0.75	-0.2
3,456,969	+		IAI47_16305	0.75	+0.9
3,456,969	+		IAI47_16305	0.75	-0.7
3,456,969	+		IAI47_16305	0.75	+1.8
3,456,969	+		IAI47_16305	0.75	-0.7
3,456,969	+		IAI47_16305	0.75	-0.1
3,456,969	+		IAI47_16305	0.75	-0.8
3,456,969	+		IAI47_16305	0.75	-0.9
3,456,969	+		IAI47_16305	0.75	+1.3
3,456,969	+		IAI47_16305	0.75	+1.9
3,456,970	-		IAI47_16305	0.75	+1.4
3,456,970	-		IAI47_16305	0.75	+0.4
3,456,970	-		IAI47_16305	0.75	-0.6
3,456,970	-		IAI47_16305	0.75	-0.5
3,456,970	-		IAI47_16305	0.75	-0.0
3,456,970	-		IAI47_16305	0.75	-0.4
3,456,970	-		IAI47_16305	0.75	-0.1
3,456,970	-		IAI47_16305	0.75	+0.0
3,456,970	-		IAI47_16305	0.75	+0.2
3,456,970	-		IAI47_16305	0.75	-0.2
3,456,970	-		IAI47_16305	0.75	-0.6
3,456,970	-		IAI47_16305	0.75	+0.8
3,456,970	-		IAI47_16305	0.75	+0.9
3,456,970	-		IAI47_16305	0.75	-0.3
3,456,970	-		IAI47_16305	0.75	+0.7
3,456,973	+		IAI47_16305	0.75	-2.2
3,456,973	+		IAI47_16305	0.75	+0.0
3,456,973	+		IAI47_16305	0.75	+0.6
3,456,973	+		IAI47_16305	0.75	+0.4
3,456,973	+		IAI47_16305	0.75	+0.5
3,456,973	+		IAI47_16305	0.75	+0.8
3,456,973	+		IAI47_16305	0.75	-0.1
3,456,973	+		IAI47_16305	0.75	-2.2
3,456,973	+		IAI47_16305	0.75	-1.3
3,456,973	+		IAI47_16305	0.75	+1.0
3,456,973	+		IAI47_16305	0.75	+0.9
3,456,974	-		IAI47_16305	0.75	-0.6
3,456,974	-		IAI47_16305	0.75	+0.6
3,456,974	-		IAI47_16305	0.75	-1.4
3,456,974	-		IAI47_16305	0.75	-0.1
3,456,974	-		IAI47_16305	0.75	-0.8
3,456,974	-		IAI47_16305	0.75	-1.0
3,456,974	-		IAI47_16305	0.75	+0.3
3,456,974	-		IAI47_16305	0.75	+2.2
3,456,974	-		IAI47_16305	0.75	-2.6
3,456,974	-		IAI47_16305	0.75	-0.2
3,456,974	-		IAI47_16305	0.75	-2.3
3,456,974	-		IAI47_16305	0.75	-0.2
3,457,002	+		IAI47_16305	0.78	-1.0
3,457,002	+		IAI47_16305	0.78	-0.1
3,457,002	+		IAI47_16305	0.78	-1.6
3,457,002	+		IAI47_16305	0.78	-0.6
3,457,002	+		IAI47_16305	0.78	-1.6
3,457,002	+		IAI47_16305	0.78	-1.7
3,457,002	+		IAI47_16305	0.78	-0.5
3,457,002	+		IAI47_16305	0.78	-2.4
3,457,003	-		IAI47_16305	0.78	+0.4
3,457,026	+		IAI47_16305	0.80	+0.2
3,457,026	+		IAI47_16305	0.80	-0.0
3,457,026	+		IAI47_16305	0.80	-0.6
3,457,027	-		IAI47_16305	0.80	+0.9
3,457,027	-		IAI47_16305	0.80	-0.3
3,457,227	+				-0.4
3,457,227	+				-0.1
3,457,228	-				-0.7
3,457,228	-				+2.8
3,457,228	-				+0.1
3,457,285	+				-0.4
3,457,286	-				-0.4
3,457,292	-				+0.3
3,457,375	-		IAI47_16310	0.12	+0.5
3,457,375	-		IAI47_16310	0.12	+0.6
3,457,375	-		IAI47_16310	0.12	-1.0
3,457,415	+		IAI47_16310	0.15	-0.2
3,457,438	+		IAI47_16310	0.16	+0.6
3,457,438	+		IAI47_16310	0.16	+0.8
3,457,438	+		IAI47_16310	0.16	+0.1
3,457,438	+		IAI47_16310	0.16	-0.2
3,457,438	+		IAI47_16310	0.16	+0.0
3,457,439	-		IAI47_16310	0.16	-0.7
3,457,439	-		IAI47_16310	0.16	-0.5
3,457,439	-		IAI47_16310	0.16	+0.2
3,457,439	-		IAI47_16310	0.16	-0.5
3,457,442	+		IAI47_16310	0.17	-0.9
3,457,442	+		IAI47_16310	0.17	+0.5
3,457,442	+		IAI47_16310	0.17	-0.3
3,457,442	+		IAI47_16310	0.17	+2.2
3,457,442	+		IAI47_16310	0.17	+0.9
3,457,442	+		IAI47_16310	0.17	-0.7
3,457,442	+		IAI47_16310	0.17	+1.4
3,457,443	-		IAI47_16310	0.17	-0.5
3,457,443	-		IAI47_16310	0.17	-1.7
3,457,443	-		IAI47_16310	0.17	-1.1
3,457,443	-		IAI47_16310	0.17	+1.7
3,457,463	+		IAI47_16310	0.18	+0.1
3,457,463	+		IAI47_16310	0.18	+1.2
3,457,471	+		IAI47_16310	0.19	-1.4
3,457,471	+		IAI47_16310	0.19	+0.4
3,457,472	-		IAI47_16310	0.19	+1.8
3,457,472	-		IAI47_16310	0.19	-1.5
3,457,472	-		IAI47_16310	0.19	-0.6
3,457,472	-		IAI47_16310	0.19	+1.0
3,457,472	-		IAI47_16310	0.19	-2.8
3,457,522	+		IAI47_16310	0.23	+1.3
3,457,555	+		IAI47_16310	0.25	+0.7
3,457,555	+		IAI47_16310	0.25	+0.3
3,457,555	+		IAI47_16310	0.25	+1.6
3,457,555	+		IAI47_16310	0.25	-0.6
3,457,555	+		IAI47_16310	0.25	-0.4
3,457,555	+		IAI47_16310	0.25	-1.0
3,457,556	-		IAI47_16310	0.25	-0.4
3,457,556	-		IAI47_16310	0.25	-0.4
3,457,556	-		IAI47_16310	0.25	-0.2
3,457,556	-		IAI47_16310	0.25	-2.3
3,457,556	-		IAI47_16310	0.25	-0.2
3,457,556	-		IAI47_16310	0.25	-0.7
3,457,556	-		IAI47_16310	0.25	+0.5
3,457,556	-		IAI47_16310	0.25	-1.7
3,457,556	-		IAI47_16310	0.25	-0.9
3,457,669	+		IAI47_16310	0.34	+1.4
3,457,669	+		IAI47_16310	0.34	-0.0
3,457,670	-		IAI47_16310	0.34	+0.6
3,457,670	-		IAI47_16310	0.34	+1.0
3,457,670	-		IAI47_16310	0.34	-0.2
3,457,670	-		IAI47_16310	0.34	+1.3
3,457,676	+		IAI47_16310	0.34	+0.3
3,457,676	+		IAI47_16310	0.34	-0.8
3,457,677	-		IAI47_16310	0.34	-0.3
3,457,677	-		IAI47_16310	0.34	-1.9
3,457,677	-		IAI47_16310	0.34	-0.6
3,457,682	+		IAI47_16310	0.35	+0.3
3,457,683	-		IAI47_16310	0.35	-0.0
3,457,733	+		IAI47_16310	0.39	-1.8
3,457,733	+		IAI47_16310	0.39	+0.8
3,457,734	-		IAI47_16310	0.39	-0.7
3,457,765	+		IAI47_16310	0.41	+0.4
3,457,765	+		IAI47_16310	0.41	-1.1
3,457,765	+		IAI47_16310	0.41	+2.4
3,457,765	+		IAI47_16310	0.41	-0.4
3,457,765	+		IAI47_16310	0.41	-0.9
3,457,765	+		IAI47_16310	0.41	+0.3
3,457,794	-		IAI47_16310	0.43	+1.1
3,457,805	+		IAI47_16310	0.44	+0.1
3,457,856	+		IAI47_16310	0.48	-0.9
3,457,856	+		IAI47_16310	0.48	+0.9
3,457,856	+		IAI47_16310	0.48	+1.5
3,457,856	+		IAI47_16310	0.48	-1.1
3,457,856	+		IAI47_16310	0.48	-0.6
3,457,856	+		IAI47_16310	0.48	-0.8
3,457,857	-		IAI47_16310	0.48	+0.1
3,457,857	-		IAI47_16310	0.48	-0.3
3,457,857	-		IAI47_16310	0.48	-0.1
3,457,857	-		IAI47_16310	0.48	-0.3
3,457,857	-		IAI47_16310	0.48	-0.5
3,457,857	-		IAI47_16310	0.48	-0.8
3,457,857	-		IAI47_16310	0.48	+0.2
3,457,857	-		IAI47_16310	0.48	+0.3
3,457,857	-		IAI47_16310	0.48	+0.2
3,457,857	-		IAI47_16310	0.48	-1.2
3,457,857	-		IAI47_16310	0.48	-0.4
3,457,857	-		IAI47_16310	0.48	+0.1
3,457,857	-		IAI47_16310	0.48	-0.4
3,457,857	-		IAI47_16310	0.48	+0.6
3,457,892	+		IAI47_16310	0.51	-0.6
3,457,892	+		IAI47_16310	0.51	+1.8
3,457,892	+		IAI47_16310	0.51	-1.2
3,457,892	+		IAI47_16310	0.51	+0.2
3,457,892	+		IAI47_16310	0.51	-1.1
3,457,892	+		IAI47_16310	0.51	+1.3
3,457,892	+		IAI47_16310	0.51	-0.1
3,457,892	+		IAI47_16310	0.51	-0.4
3,457,893	-		IAI47_16310	0.51	+0.9
3,457,893	-		IAI47_16310	0.51	-0.9
3,457,893	-		IAI47_16310	0.51	-1.8
3,457,930	+		IAI47_16310	0.53	+1.6
3,457,930	+		IAI47_16310	0.53	-1.9
3,457,931	-		IAI47_16310	0.54	-2.4
3,457,931	-		IAI47_16310	0.54	+1.7
3,457,931	-		IAI47_16310	0.54	+0.2
3,457,931	-		IAI47_16310	0.54	-1.8
3,457,931	-		IAI47_16310	0.54	-0.1
3,457,936	+		IAI47_16310	0.54	-1.4
3,457,936	+		IAI47_16310	0.54	-0.6
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