Strain Fitness in Pantoea sp. MT58 around IAI47_13330

Experiment: Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
2,818,532	+		IAI47_13325	0.20	-0.2
2,818,532	+		IAI47_13325	0.20	+0.2
2,818,533	-		IAI47_13325	0.20	+0.1
2,818,533	-		IAI47_13325	0.20	+1.3
2,818,533	-		IAI47_13325	0.20	+0.1
2,818,533	-		IAI47_13325	0.20	+1.3
2,818,653	+		IAI47_13325	0.31	+0.5
2,818,653	+		IAI47_13325	0.31	-0.4
2,818,654	-		IAI47_13325	0.31	-1.5
2,818,654	-		IAI47_13325	0.31	+0.1
2,818,697	-		IAI47_13325	0.34	-0.9
2,818,792	+		IAI47_13325	0.43	+2.8
2,818,792	+		IAI47_13325	0.43	+0.5
2,818,798	+		IAI47_13325	0.43	+1.3
2,818,798	+		IAI47_13325	0.43	-0.5
2,818,798	+		IAI47_13325	0.43	-1.1
2,818,798	+		IAI47_13325	0.43	-0.2
2,818,798	+		IAI47_13325	0.43	-0.2
2,818,798	+		IAI47_13325	0.43	+0.1
2,818,871	+		IAI47_13325	0.49	-2.9
2,818,872	-		IAI47_13325	0.49	+0.2
2,818,872	-		IAI47_13325	0.49	+0.4
2,818,872	-		IAI47_13325	0.49	-0.8
2,818,872	-		IAI47_13325	0.49	-1.1
2,818,883	+		IAI47_13325	0.50	-0.7
2,818,889	-		IAI47_13325	0.51	+0.5
2,818,950	+		IAI47_13325	0.56	-2.1
2,818,950	+		IAI47_13325	0.56	+0.5
2,818,951	-		IAI47_13325	0.56	-1.3
2,818,951	-		IAI47_13325	0.56	-0.1
2,819,077	+		IAI47_13325	0.67	+0.4
2,819,078	-		IAI47_13325	0.67	+1.9
2,819,078	-		IAI47_13325	0.67	-0.7
2,819,111	+		IAI47_13325	0.70	-1.1
2,819,111	+		IAI47_13325	0.70	+1.7
2,819,111	+		IAI47_13325	0.70	+2.0
2,819,112	-		IAI47_13325	0.70	+0.2
2,819,112	-		IAI47_13325	0.70	+0.4
2,819,112	-		IAI47_13325	0.70	+0.5
2,819,162	+		IAI47_13325	0.74	+0.9
2,819,162	+		IAI47_13325	0.74	-0.4
2,819,163	-		IAI47_13325	0.74	-0.4
2,819,163	-		IAI47_13325	0.74	+0.8
2,819,163	-		IAI47_13325	0.74	+1.5
2,819,163	-		IAI47_13325	0.74	-0.2
2,819,232	-		IAI47_13325	0.80	-0.5
2,819,232	-		IAI47_13325	0.80	+0.9
2,819,232	-		IAI47_13325	0.80	+0.1
2,819,239	+		IAI47_13325	0.81	-0.8
2,819,239	+		IAI47_13325	0.81	-0.2
2,819,239	+		IAI47_13325	0.81	+0.3
2,819,239	+		IAI47_13325	0.81	-0.2
2,819,239	+		IAI47_13325	0.81	-2.5
2,819,239	+		IAI47_13325	0.81	-0.4
2,819,240	-		IAI47_13325	0.81	+1.3
2,819,240	-		IAI47_13325	0.81	-0.7
2,819,240	-		IAI47_13325	0.81	-0.5
2,819,240	-		IAI47_13325	0.81	-0.3
2,819,240	-		IAI47_13325	0.81	+1.3
2,819,240	-		IAI47_13325	0.81	-1.4
2,819,240	-		IAI47_13325	0.81	+0.0
2,819,240	-		IAI47_13325	0.81	-0.2
2,819,242	+		IAI47_13325	0.81	-0.1
2,819,242	+		IAI47_13325	0.81	+0.1
2,819,243	-		IAI47_13325	0.81	-0.1
2,819,294	+		IAI47_13325	0.85	+0.7
2,819,294	+		IAI47_13325	0.85	+1.5
2,819,295	-		IAI47_13325	0.85	+0.1
2,819,295	-		IAI47_13325	0.85	-0.5
2,819,295	-		IAI47_13325	0.85	-0.3
2,819,420	+				-1.2
2,819,445	-				-0.9
2,819,472	+				+0.1
2,819,473	-				-0.2
2,819,508	-				-0.2
2,819,616	+		IAI47_13330	0.16	+1.5
2,819,658	+		IAI47_13330	0.21	-0.3
2,819,658	+		IAI47_13330	0.21	+1.9
2,819,658	+		IAI47_13330	0.21	+1.2
2,819,658	+		IAI47_13330	0.21	-0.6
2,819,669	+		IAI47_13330	0.22	+2.1
2,819,669	+		IAI47_13330	0.22	+0.4
2,819,669	+		IAI47_13330	0.22	-1.7
2,819,669	+		IAI47_13330	0.22	+0.8
2,819,670	-		IAI47_13330	0.22	-0.0
2,819,670	-		IAI47_13330	0.22	-2.3
2,819,678	-		IAI47_13330	0.23	-0.1
2,819,678	-		IAI47_13330	0.23	-0.3
2,819,678	-		IAI47_13330	0.23	-1.0
2,819,730	+		IAI47_13330	0.28	+1.5
2,819,730	+		IAI47_13330	0.28	-0.5
2,819,731	-		IAI47_13330	0.29	+1.1
2,819,731	-		IAI47_13330	0.29	-0.2
2,819,827	+		IAI47_13330	0.39	+0.5
2,819,827	+		IAI47_13330	0.39	+0.0
2,819,827	+		IAI47_13330	0.39	+0.6
2,819,827	+		IAI47_13330	0.39	-0.9
2,819,828	-		IAI47_13330	0.39	+3.2
2,819,828	-		IAI47_13330	0.39	-0.1
2,819,841	+		IAI47_13330	0.41	+0.7
2,819,841	+		IAI47_13330	0.41	+0.2
2,819,841	+		IAI47_13330	0.41	-1.1
2,819,842	-		IAI47_13330	0.41	+0.4
2,819,881	+		IAI47_13330	0.45	-1.2
2,819,911	+		IAI47_13330	0.48	+0.4
2,819,911	+		IAI47_13330	0.48	+0.0
2,819,912	-		IAI47_13330	0.48	+0.3
2,819,953	+		IAI47_13330	0.53	+0.4
2,819,953	+		IAI47_13330	0.53	+0.7
2,819,953	+		IAI47_13330	0.53	+0.3
2,819,954	-		IAI47_13330	0.53	+0.7
2,819,954	-		IAI47_13330	0.53	+1.5
2,819,980	+		IAI47_13330	0.56	-0.9
2,819,981	-		IAI47_13330	0.56	+1.3
2,819,981	-		IAI47_13330	0.56	-1.2
2,819,981	-		IAI47_13330	0.56	+0.3
2,820,141	+		IAI47_13330	0.73	-0.8
2,820,142	-		IAI47_13330	0.74	-0.2
2,820,142	-		IAI47_13330	0.74	+1.0
2,820,150	+		IAI47_13330	0.74	+1.5
2,820,150	+		IAI47_13330	0.74	+0.3
2,820,151	-		IAI47_13330	0.75	+1.5
2,820,214	+		IAI47_13330	0.81	+0.9
2,820,215	-		IAI47_13330	0.82	+3.2
2,820,215	-		IAI47_13330	0.82	-0.2
2,820,215	-		IAI47_13330	0.82	+0.7
2,820,227	+		IAI47_13330	0.83	+1.4
2,820,228	-		IAI47_13330	0.83	-0.9
2,820,337	+				-0.3
2,820,337	+				-2.5
2,820,337	+				-1.0
2,820,337	+				-0.6
2,820,337	+				-0.8
2,820,337	+				+1.4
2,820,337	+				+0.6
2,820,338	-				-0.0
2,820,338	-				+0.2
2,820,338	-				+0.3
2,820,338	-				-1.9
2,820,443	+				+0.1
2,820,443	+				+1.3
2,820,443	+				-0.9
2,820,443	+				+1.0
2,820,443	+				-0.7
2,820,444	-				-1.4
2,820,444	-				-0.5
2,820,444	-				+0.4
2,820,444	-				-0.9
2,820,444	-				+0.3
2,820,444	-				+1.0
2,820,444	-				-1.0
2,820,444	-				+1.0
2,820,444	-				+0.8
2,820,518	+				+0.6
2,820,523	+				+0.7
2,820,524	-				+0.1
2,820,524	-				+0.2
2,820,524	-				+0.2
2,820,524	-				+0.3
2,820,533	-				+1.1
2,820,540	+				+0.6
2,820,550	+				-0.9
2,820,550	+				+0.3
2,820,572	-				-0.6
2,820,603	+				-0.1
2,820,604	-				-0.1
2,820,606	+				-0.7
2,820,611	+				-0.2
2,820,630	+				-2.1
2,820,664	+				+0.3
2,820,664	+				+0.7
2,820,664	+				-0.2
2,820,664	+				+1.4
2,820,664	+				+0.4
2,820,664	+				-0.1
2,820,664	+				-0.1
2,820,664	+				-0.2
2,820,665	-				-0.3
2,820,665	-				-0.0
2,820,665	-				-1.1
2,820,665	-				+0.7
2,820,665	-				-2.9
2,820,665	-				+0.5
2,820,670	+				-0.4
2,820,671	-				+1.4
2,820,675	+				-1.7
2,820,676	-				-0.3
2,820,682	+				+0.4
2,820,683	-				+0.2
2,820,683	-				-0.0
2,820,686	+				-3.3
2,820,686	+				+0.5
2,820,686	+				-0.9
2,820,686	+				-1.6
2,820,686	+				-0.9
2,820,686	+				+0.1
2,820,686	+				-3.1
2,820,686	+				+0.7
2,820,686	+				-1.0
2,820,686	+				-0.1
2,820,687	-				-2.4
2,820,687	-				-0.7
2,820,687	-				-0.2
2,820,687	-				-1.2
2,820,687	-				-0.1
2,820,687	-				+0.8
2,820,687	-				+2.8
2,820,687	-				-0.5
2,820,687	-				-0.6
2,820,687	-				+0.7
2,820,687	-				-0.3
2,820,687	-				+0.9
2,820,687	-				-1.6
2,820,687	-				-0.2
2,820,687	-				+0.1
2,820,791	-				+0.9
2,820,815	+				-0.2
2,820,815	+				-0.0
2,820,815	+				+1.7
2,820,818	+				-2.8
2,820,818	+				+0.8
2,820,818	+				-1.4
2,820,818	+				-3.0
2,820,818	+				-0.9
2,820,819	-				-1.2
2,820,819	-				+1.1
2,820,819	-				+0.8
2,820,871	-		IAI47_13335	0.12	-1.4
2,820,921	-		IAI47_13335	0.15	+0.1
2,820,962	+		IAI47_13335	0.18	-0.8
2,820,963	-		IAI47_13335	0.18	-0.2
2,820,963	-		IAI47_13335	0.18	-2.3
2,821,000	-		IAI47_13335	0.21	-0.2
2,821,043	+		IAI47_13335	0.24	+0.8
2,821,043	+		IAI47_13335	0.24	-1.1
2,821,044	-		IAI47_13335	0.24	-2.6
2,821,067	+		IAI47_13335	0.25	-0.6
2,821,095	+		IAI47_13335	0.27	+1.2
2,821,095	+		IAI47_13335	0.27	+1.1
2,821,095	+		IAI47_13335	0.27	+0.9
2,821,095	+		IAI47_13335	0.27	-1.3
2,821,096	-		IAI47_13335	0.27	-0.4
2,821,096	-		IAI47_13335	0.27	-0.9
2,821,096	-		IAI47_13335	0.27	-1.0
2,821,096	-		IAI47_13335	0.27	-0.9
2,821,096	-		IAI47_13335	0.27	-0.6
2,821,096	-		IAI47_13335	0.27	-0.0
2,821,096	-		IAI47_13335	0.27	-1.5
2,821,121	-		IAI47_13335	0.29	-1.2
2,821,121	-		IAI47_13335	0.29	-0.4
2,821,193	+		IAI47_13335	0.34	-3.0
2,821,203	-		IAI47_13335	0.35	-0.8
2,821,260	+		IAI47_13335	0.38	-0.2
2,821,261	-		IAI47_13335	0.38	-0.4
2,821,261	-		IAI47_13335	0.38	+0.1
2,821,261	-		IAI47_13335	0.38	-1.6
2,821,261	-		IAI47_13335	0.38	-1.8
2,821,281	+		IAI47_13335	0.40	-0.4
2,821,282	-		IAI47_13335	0.40	+0.8
2,821,380	+		IAI47_13335	0.47	+0.4
2,821,380	+		IAI47_13335	0.47	-0.4
2,821,381	-		IAI47_13335	0.47	+0.9