Strain Fitness in Pantoea sp. MT58 around IAI47_07435

Experiment: Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
1,569,962	+				-1.1
1,569,962	+				+0.8
1,569,962	+				-1.3
1,569,962	+				+0.3
1,569,980	+				-2.1
1,569,981	-				-0.3
1,569,981	-				+0.6
1,569,981	-				-0.9
1,570,035	+				-0.3
1,570,035	+				-0.1
1,570,036	-				-0.5
1,570,058	+				-0.4
1,570,064	+				-0.3
1,570,064	+				-0.0
1,570,079	+				+0.7
1,570,080	-				+1.0
1,570,080	-				+1.2
1,570,087	+				+0.8
1,570,087	+				+0.3
1,570,088	-				+0.3
1,570,088	-				+1.4
1,570,104	+				+1.1
1,570,104	+				-1.6
1,570,130	+				+0.7
1,570,131	-				+1.8
1,570,131	-				-0.6
1,570,131	-				-1.3
1,570,131	-				-1.1
1,570,154	+				-0.8
1,570,154	+				-1.5
1,570,155	-				-0.2
1,570,155	-				+0.9
1,570,155	-				+1.8
1,570,166	+				+0.8
1,570,205	+				-0.4
1,570,205	+				+1.2
1,570,205	+				-0.3
1,570,206	-				+0.2
1,570,230	-				-1.1
1,570,274	+				+0.1
1,570,274	+				+0.3
1,570,274	+				+0.4
1,570,274	+				+0.8
1,570,274	+				+0.1
1,570,274	+				+1.0
1,570,274	+				-1.4
1,570,274	+				-0.1
1,570,274	+				+0.4
1,570,274	+				+3.0
1,570,274	+				+0.4
1,570,274	+				-3.3
1,570,274	+				-0.6
1,570,274	+				-0.3
1,570,274	+				+1.6
1,570,274	+				-0.0
1,570,275	-				+0.1
1,570,275	-				+1.7
1,570,275	-				+0.7
1,570,275	-				-0.7
1,570,275	-				-0.8
1,570,275	-				+1.0
1,570,275	-				+1.6
1,570,275	-				+0.4
1,570,275	-				+0.2
1,570,275	-				-0.6
1,570,275	-				-0.6
1,570,275	-				-1.2
1,570,275	-				+0.3
1,570,275	-				+0.3
1,570,278	+				+0.2
1,570,278	+				-0.8
1,570,278	+				-0.2
1,570,278	+				-0.1
1,570,279	-				-0.2
1,570,279	-				-0.3
1,570,279	-				-0.0
1,570,279	-				-1.6
1,570,306	+		IAI47_07430	0.12	-1.7
1,570,306	+		IAI47_07430	0.12	+0.9
1,570,311	+		IAI47_07430	0.13	+0.8
1,570,311	+		IAI47_07430	0.13	+2.0
1,570,311	+		IAI47_07430	0.13	+0.3
1,570,311	+		IAI47_07430	0.13	-0.3
1,570,311	+		IAI47_07430	0.13	+0.2
1,570,311	+		IAI47_07430	0.13	+0.3
1,570,311	+		IAI47_07430	0.13	+2.1
1,570,312	-		IAI47_07430	0.14	-0.2
1,570,312	-		IAI47_07430	0.14	-0.6
1,570,312	-		IAI47_07430	0.14	-1.4
1,570,319	+		IAI47_07430	0.15	-0.6
1,570,319	+		IAI47_07430	0.15	+0.2
1,570,319	+		IAI47_07430	0.15	-0.4
1,570,319	+		IAI47_07430	0.15	-0.2
1,570,320	-		IAI47_07430	0.15	-0.6
1,570,320	-		IAI47_07430	0.15	-0.6
1,570,320	-		IAI47_07430	0.15	+1.3
1,570,320	-		IAI47_07430	0.15	+0.6
1,570,320	-		IAI47_07430	0.15	+0.7
1,570,320	-		IAI47_07430	0.15	+0.6
1,570,351	+		IAI47_07430	0.21	-1.8
1,570,351	+		IAI47_07430	0.21	+0.1
1,570,352	-		IAI47_07430	0.21	-0.6
1,570,359	-		IAI47_07430	0.22	-0.0
1,570,369	-		IAI47_07430	0.24	-1.0
1,570,369	-		IAI47_07430	0.24	+0.5
1,570,419	+		IAI47_07430	0.33	+0.1
1,570,419	+		IAI47_07430	0.33	-0.7
1,570,419	+		IAI47_07430	0.33	+1.0
1,570,420	-		IAI47_07430	0.33	+0.5
1,570,422	+		IAI47_07430	0.34	-0.9
1,570,422	+		IAI47_07430	0.34	+2.1
1,570,423	-		IAI47_07430	0.34	+1.8
1,570,423	-		IAI47_07430	0.34	-0.5
1,570,423	-		IAI47_07430	0.34	+1.4
1,570,423	-		IAI47_07430	0.34	+2.0
1,570,423	-		IAI47_07430	0.34	-0.3
1,570,435	+		IAI47_07430	0.36	-0.6
1,570,435	+		IAI47_07430	0.36	+1.7
1,570,435	+		IAI47_07430	0.36	-1.6
1,570,436	-		IAI47_07430	0.36	-0.9
1,570,436	-		IAI47_07430	0.36	+0.2
1,570,436	-		IAI47_07430	0.36	-0.1
1,570,441	+		IAI47_07430	0.37	-0.1
1,570,442	-		IAI47_07430	0.37	-0.6
1,570,442	-		IAI47_07430	0.37	-1.5
1,570,456	-		IAI47_07430	0.40	-1.8
1,570,476	+		IAI47_07430	0.43	+0.2
1,570,476	+		IAI47_07430	0.43	+0.4
1,570,476	+		IAI47_07430	0.43	+2.0
1,570,477	-		IAI47_07430	0.43	-0.2
1,570,477	-		IAI47_07430	0.43	+1.7
1,570,484	-		IAI47_07430	0.45	-0.4
1,570,484	-		IAI47_07430	0.45	+1.4
1,570,484	-		IAI47_07430	0.45	-1.3
1,570,519	+		IAI47_07430	0.51	-1.1
1,570,520	-		IAI47_07430	0.51	+1.7
1,570,543	+		IAI47_07430	0.55	+0.9
1,570,543	+		IAI47_07430	0.55	+0.6
1,570,544	-		IAI47_07430	0.56	+0.2
1,570,544	-		IAI47_07430	0.56	+0.4
1,570,547	+		IAI47_07430	0.56	-0.7
1,570,547	+		IAI47_07430	0.56	-0.1
1,570,548	-		IAI47_07430	0.56	+0.6
1,570,548	-		IAI47_07430	0.56	-1.1
1,570,548	-		IAI47_07430	0.56	+0.3
1,570,548	-		IAI47_07430	0.56	+0.4
1,570,548	-		IAI47_07430	0.56	+0.5
1,570,548	-		IAI47_07430	0.56	+1.5
1,570,581	+		IAI47_07430	0.62	+0.6
1,570,582	-		IAI47_07430	0.62	+0.2
1,570,582	-		IAI47_07430	0.62	+0.4
1,570,597	+		IAI47_07430	0.65	+1.5
1,570,597	+		IAI47_07430	0.65	-0.8
1,570,598	-		IAI47_07430	0.65	+0.7
1,570,605	+		IAI47_07430	0.67	+2.1
1,570,608	+		IAI47_07430	0.67	-0.6
1,570,608	+		IAI47_07430	0.67	+0.9
1,570,609	-		IAI47_07430	0.67	+3.6
1,570,609	-		IAI47_07430	0.67	-1.1
1,570,648	-		IAI47_07430	0.74	-0.9
1,570,666	-		IAI47_07430	0.78	-0.4
1,570,668	+		IAI47_07430	0.78	-1.2
1,570,669	-		IAI47_07430	0.78	+2.6
1,570,674	+		IAI47_07430	0.79	+2.5
1,570,674	+		IAI47_07430	0.79	-0.1
1,570,674	+		IAI47_07430	0.79	-0.2
1,570,675	-		IAI47_07430	0.79	-1.1
1,570,675	-		IAI47_07430	0.79	+0.5
1,570,689	+		IAI47_07430	0.82	-1.5
1,570,689	+		IAI47_07430	0.82	-0.7
1,570,689	+		IAI47_07430	0.82	+0.9
1,570,690	-		IAI47_07430	0.82	+2.9
1,570,690	-		IAI47_07430	0.82	+1.4
1,570,690	-		IAI47_07430	0.82	+0.5
1,570,788	+				+0.0
1,570,788	+				-0.2
1,570,789	-				+0.5
1,570,789	-				+0.8
1,570,789	-				-2.5
1,570,791	-				+0.2
1,570,794	+				+0.6
1,570,795	-				+1.0
1,570,815	-				-0.4
1,570,834	-				+1.3
1,570,843	-				+0.1
1,570,843	-				-1.3
1,570,873	+				+0.0
1,570,873	+				-0.1
1,570,873	+				-0.1
1,570,873	+				-1.2
1,570,873	+				+0.6
1,570,873	+				-0.8
1,570,873	+				+0.6
1,570,873	+				-0.0
1,570,873	+				-0.6
1,570,873	+				+0.3
1,570,874	-				+0.4
1,570,874	-				+1.2
1,570,874	-				+1.1
1,570,874	-				+2.2
1,570,874	-				-0.4
1,570,874	-				-0.6
1,570,921	-				-2.3
1,570,935	+				+0.8
1,570,935	+				-0.9
1,570,935	+				-0.1
1,570,936	-				+0.7
1,570,936	-				+0.3
1,570,936	-				+0.6
1,570,936	-				-1.1
1,570,936	-				+1.2
1,570,936	-				-0.1
1,570,937	+				+0.1
1,570,937	+				+1.0
1,570,938	-				+1.2
1,570,938	-				-1.4
1,570,938	-				-0.6
1,570,938	-				-1.4
1,570,938	-				-1.0
1,570,938	-				-0.1
1,570,939	+				+1.6
1,570,939	+				+0.0
1,570,939	+				+1.1
1,570,939	+				+1.5
1,570,939	+				-1.4
1,570,940	-				+0.2
1,570,940	-				+0.4
1,570,960	+				-0.4
1,570,990	-				-0.3
1,570,990	-				-1.1
1,570,996	+				-0.4
1,570,996	+				+0.4
1,570,996	+				-1.9
1,570,996	+				+0.2
1,570,996	+				+0.1
1,570,997	-				+1.2
1,570,997	-				+0.1
1,570,997	-				-0.9
1,570,997	-				+0.6
1,570,997	-				-1.1
1,570,997	-				-0.8
1,570,997	-				+1.8
1,571,000	+				+1.1
1,571,000	+				+0.2
1,571,064	-		IAI47_07435	0.23	+0.0
1,571,074	-		IAI47_07435	0.25	-0.4
1,571,170	+		IAI47_07435	0.47	-0.2
1,571,170	+		IAI47_07435	0.47	+0.6
1,571,170	+		IAI47_07435	0.47	-0.9
1,571,170	+		IAI47_07435	0.47	+0.4
1,571,170	+		IAI47_07435	0.47	-1.2
1,571,170	+		IAI47_07435	0.47	-0.1
1,571,170	+		IAI47_07435	0.47	-1.9
1,571,171	-		IAI47_07435	0.47	-0.1
1,571,171	-		IAI47_07435	0.47	-0.8
1,571,171	-		IAI47_07435	0.47	-0.4
1,571,171	-		IAI47_07435	0.47	-0.8
1,571,171	-		IAI47_07435	0.47	-0.2
1,571,171	-		IAI47_07435	0.47	-0.6
1,571,171	-		IAI47_07435	0.47	-1.3
1,571,171	-		IAI47_07435	0.47	+0.9
1,571,171	-		IAI47_07435	0.47	-0.5
1,571,171	-		IAI47_07435	0.47	-0.4
1,571,171	-		IAI47_07435	0.47	-0.2
1,571,171	-		IAI47_07435	0.47	+0.2
1,571,237	-		IAI47_07435	0.61	+0.1
1,571,389	+				+1.0
1,571,389	+				-0.2
1,571,389	+				+0.8
1,571,390	-				-1.4
1,571,390	-				-0.3
1,571,390	-				-1.8
1,571,390	-				-1.1
1,571,390	-				+0.7
1,571,390	-				-0.9
1,571,492	+				-0.7
1,571,492	+				+1.4
1,571,493	-				+0.2
1,571,529	-				-0.3
1,571,600	+				-0.5
1,571,600	+				-0.0
1,571,600	+				+0.9
1,571,600	+				+0.1
1,571,600	+				+1.5
1,571,600	+				-0.5
1,571,600	+				+0.1
1,571,600	+				+2.1
1,571,600	+				+0.8
1,571,601	-				-0.1
1,571,601	-				+0.1
1,571,601	-				+0.2
1,571,601	-				-0.4
1,571,601	-				+0.4
1,571,601	-				-0.5
1,571,601	-				-0.2
1,571,601	-				+0.8
1,571,622	+				-1.0
1,571,685	+				-1.0
1,571,698	+				+0.5
1,571,698	+				-3.0
1,571,699	-				+0.5
1,571,699	-				+0.3
1,571,699	-				-1.8
1,571,699	-				+1.1
1,571,727	+		IAI47_07440	0.10	-1.1
1,571,737	-		IAI47_07440	0.11	+0.4
1,571,737	-		IAI47_07440	0.11	-0.2
1,571,737	-		IAI47_07440	0.11	+1.8
1,571,773	+		IAI47_07440	0.12	-0.4
1,571,838	+		IAI47_07440	0.15	-1.0
1,571,839	-		IAI47_07440	0.15	+0.1
1,571,839	-		IAI47_07440	0.15	+0.5
1,571,839	-		IAI47_07440	0.15	+0.5
1,571,877	-		IAI47_07440	0.16	-0.3
1,571,988	+		IAI47_07440	0.21	+0.5
1,571,989	-		IAI47_07440	0.21	+1.8
1,571,989	-		IAI47_07440	0.21	-1.6
1,571,998	-		IAI47_07440	0.21	+1.9
1,572,051	-		IAI47_07440	0.23	+0.8
1,572,056	+		IAI47_07440	0.23	+0.7
1,572,179	+		IAI47_07440	0.28	+0.3
1,572,180	-		IAI47_07440	0.28	+0.4
1,572,180	-		IAI47_07440	0.28	-0.0
1,572,210	+		IAI47_07440	0.30	+0.1
1,572,210	+		IAI47_07440	0.30	-1.6
1,572,211	-		IAI47_07440	0.30	+2.4
1,572,211	-		IAI47_07440	0.30	+0.2
1,572,211	-		IAI47_07440	0.30	+1.2
1,572,211	-		IAI47_07440	0.30	+0.7
1,572,242	+		IAI47_07440	0.31	-0.6
1,572,243	-		IAI47_07440	0.31	+0.7
1,572,243	-		IAI47_07440	0.31	-0.6
1,572,243	-		IAI47_07440	0.31	+2.0
1,572,286	-		IAI47_07440	0.33	+0.8
1,572,300	+		IAI47_07440	0.33	-0.3
1,572,301	-		IAI47_07440	0.33	-0.1
1,572,324	+		IAI47_07440	0.34	-0.1
1,572,382	+		IAI47_07440	0.36	-1.9
1,572,384	+		IAI47_07440	0.36	-0.9
1,572,384	+		IAI47_07440	0.36	-0.1
1,572,384	+		IAI47_07440	0.36	-1.1
1,572,385	-		IAI47_07440	0.37	+0.4
1,572,385	-		IAI47_07440	0.37	+0.1
1,572,385	-		IAI47_07440	0.37	-0.4