Strain Fitness in Pantoea sp. MT58 around IAI47_14450

Experiment: Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
3,051,636	+				-1.3
3,051,643	+				+1.0
3,051,644	-				+0.5
3,051,644	-				-2.0
3,051,673	+				+0.2
3,051,678	-				+0.2
3,051,678	-				+0.1
3,051,678	-				-0.6
3,051,690	-				-0.6
3,051,703	+				+0.5
3,051,703	+				-0.8
3,051,703	+				-1.9
3,051,703	+				+1.2
3,051,704	-				+1.6
3,051,704	-				+0.0
3,051,771	+				-1.5
3,051,771	+				+2.2
3,051,781	+				+0.9
3,051,791	+				-0.1
3,051,810	-				+0.1
3,051,810	-				-0.1
3,051,810	-				+1.1
3,051,813	-				+1.6
3,051,844	-				-1.1
3,051,844	-				+0.4
3,052,638	+				+0.5
3,052,639	-				+0.8
3,052,689	+		IAI47_14450	0.12	-0.2
3,052,689	+		IAI47_14450	0.12	-0.2
3,052,689	+		IAI47_14450	0.12	-0.3
3,052,690	-		IAI47_14450	0.13	+2.1
3,052,690	-		IAI47_14450	0.13	-1.4
3,052,690	-		IAI47_14450	0.13	+0.2
3,052,690	-		IAI47_14450	0.13	+1.2
3,052,722	+		IAI47_14450	0.16	-0.4
3,052,722	+		IAI47_14450	0.16	+0.3
3,052,722	+		IAI47_14450	0.16	+0.0
3,052,722	+		IAI47_14450	0.16	-2.1
3,052,722	+		IAI47_14450	0.16	-1.3
3,052,723	-		IAI47_14450	0.16	-0.6
3,052,723	-		IAI47_14450	0.16	-1.0
3,052,809	+		IAI47_14450	0.26	+1.3
3,052,809	+		IAI47_14450	0.26	-0.4
3,052,809	+		IAI47_14450	0.26	-1.7
3,052,810	-		IAI47_14450	0.26	+0.8
3,052,898	+		IAI47_14450	0.36	+0.7
3,052,898	+		IAI47_14450	0.36	+1.1
3,052,898	+		IAI47_14450	0.36	-0.4
3,052,899	-		IAI47_14450	0.36	+1.9
3,052,940	+		IAI47_14450	0.41	+0.5
3,052,940	+		IAI47_14450	0.41	-0.2
3,052,940	+		IAI47_14450	0.41	-1.1
3,052,940	+		IAI47_14450	0.41	-0.8
3,052,940	+		IAI47_14450	0.41	+0.2
3,052,950	+		IAI47_14450	0.42	-1.0
3,052,951	-		IAI47_14450	0.42	-0.6
3,052,951	-		IAI47_14450	0.42	-2.4
3,052,951	-		IAI47_14450	0.42	+0.4
3,052,951	-		IAI47_14450	0.42	-1.6
3,052,972	+		IAI47_14450	0.44	-0.1
3,052,973	-		IAI47_14450	0.45	+0.2
3,052,998	+		IAI47_14450	0.47	+1.3
3,052,999	-		IAI47_14450	0.47	+1.8
3,053,041	-		IAI47_14450	0.52	-0.4
3,053,041	-		IAI47_14450	0.52	+1.0
3,053,045	-		IAI47_14450	0.53	+1.6
3,053,072	-				+2.4
3,053,164	+		IAI47_14450	0.66	-0.1
3,053,164	+		IAI47_14450	0.66	+0.0
3,053,173	+		IAI47_14450	0.67	+2.1
3,053,173	+		IAI47_14450	0.67	+0.2
3,053,174	-		IAI47_14450	0.67	+2.1
3,053,174	-		IAI47_14450	0.67	-0.9
3,053,196	+		IAI47_14450	0.70	-1.3
3,053,196	+		IAI47_14450	0.70	-1.2
3,053,196	+		IAI47_14450	0.70	-0.4
3,053,196	+		IAI47_14450	0.70	-0.2
3,053,197	-		IAI47_14450	0.70	-0.1
3,053,197	-		IAI47_14450	0.70	+0.2
3,053,197	-		IAI47_14450	0.70	-0.9
3,053,211	+		IAI47_14450	0.71	+0.6
3,053,211	+		IAI47_14450	0.71	+0.1
3,053,211	+		IAI47_14450	0.71	-1.0
3,053,211	+		IAI47_14450	0.71	+2.4
3,053,211	+		IAI47_14450	0.71	-1.5
3,053,211	+		IAI47_14450	0.71	-0.4
3,053,211	+		IAI47_14450	0.71	+1.6
3,053,212	-		IAI47_14450	0.72	-1.1
3,053,212	-		IAI47_14450	0.72	+0.7
3,053,212	-		IAI47_14450	0.72	-1.0
3,053,212	-		IAI47_14450	0.72	-0.4
3,053,212	-		IAI47_14450	0.72	+0.9
3,053,212	-		IAI47_14450	0.72	-0.1
3,053,212	-		IAI47_14450	0.72	+1.9
3,053,224	+		IAI47_14450	0.73	-0.1
3,053,224	+		IAI47_14450	0.73	-0.4
3,053,247	+		IAI47_14450	0.75	-2.1
3,053,248	-		IAI47_14450	0.76	+0.1
3,053,250	+		IAI47_14450	0.76	+2.4
3,053,250	+		IAI47_14450	0.76	+3.0
3,053,250	+		IAI47_14450	0.76	+0.6
3,053,250	+		IAI47_14450	0.76	-0.3
3,053,250	+		IAI47_14450	0.76	+0.7
3,053,250	+		IAI47_14450	0.76	+1.5
3,053,250	+		IAI47_14450	0.76	-1.8
3,053,251	-		IAI47_14450	0.76	+0.4
3,053,251	-		IAI47_14450	0.76	+0.6
3,053,251	-		IAI47_14450	0.76	-0.1
3,053,251	-		IAI47_14450	0.76	-1.1
3,053,251	-		IAI47_14450	0.76	-2.6
3,053,292	+		IAI47_14450	0.81	-0.3
3,053,292	+		IAI47_14450	0.81	+0.3
3,053,292	+		IAI47_14450	0.81	+0.0
3,053,292	+		IAI47_14450	0.81	+0.0
3,053,293	-		IAI47_14450	0.81	-0.9
3,053,341	+		IAI47_14450	0.86	-0.4
3,053,342	-		IAI47_14450	0.86	-1.1
3,053,446	+				+0.0
3,053,518	+				+0.6
3,053,540	+				+0.3
3,053,540	+				+0.4
3,053,540	+				-1.2
3,053,540	+				+4.2
3,053,540	+				-0.4
3,053,540	+				-0.1
3,053,541	-				+0.0
3,053,541	-				+0.5
3,053,541	-				-0.9
3,053,541	-				+1.7
3,053,541	-				-0.2
3,053,541	-				+0.4
3,053,541	-				+0.1
3,053,541	-				+1.6
3,053,541	-				-1.6
3,053,541	-				+0.7
3,053,541	-				-0.4
3,053,541	-				+0.2
3,053,542	+				+0.8
3,053,542	+				+1.3
3,053,542	+				-0.1
3,053,542	+				+0.4
3,053,542	+				+0.8
3,053,542	+				+0.0
3,053,543	-				+1.8
3,053,543	-				+0.4
3,053,543	-				-0.4
3,053,543	-				+1.6
3,053,574	-				+0.6
3,053,580	+				+0.8
3,053,581	-				-0.5
3,053,581	-				-1.4
3,053,602	-				+3.6
3,053,611	+				+1.0
3,053,611	+				-0.9
3,053,612	-				+3.1
3,053,617	-				-1.8
3,053,629	+				-1.5
3,053,630	-				-0.5
3,053,648	+				+0.2
3,053,649	-				-0.0
3,053,649	-				+0.4
3,053,686	+				-1.0
3,053,687	-				-1.6
3,053,705	+				+0.3
3,053,705	+				+0.2
3,053,705	+				+1.2
3,053,705	+				-0.9
3,053,705	+				+0.4
3,053,705	+				-0.8
3,053,705	+				-1.0
3,053,706	-				-2.1
3,053,706	-				-0.2
3,053,706	-				-0.2
3,053,718	+				+1.1
3,053,718	+				-1.1
3,053,719	-				-0.4
3,053,719	-				+0.9
3,053,719	-				-0.8
3,053,796	+		IAI47_14455	0.16	-0.1
3,053,814	+		IAI47_14455	0.19	+0.0
3,053,889	-		IAI47_14455	0.27	-0.8
3,053,908	-		IAI47_14455	0.29	+0.1
3,053,996	-		IAI47_14455	0.39	-1.5
3,053,996	-		IAI47_14455	0.39	-0.6
3,054,005	-		IAI47_14455	0.40	-0.9
3,054,074	+		IAI47_14455	0.48	-2.3
3,054,074	+		IAI47_14455	0.48	+1.5
3,054,074	+		IAI47_14455	0.48	-2.1
3,054,074	+		IAI47_14455	0.48	-0.6
3,054,074	+		IAI47_14455	0.48	-0.9
3,054,074	+		IAI47_14455	0.48	+0.3
3,054,075	+		IAI47_14455	0.49	+0.7
3,054,075	-		IAI47_14455	0.49	-1.2
3,054,075	-		IAI47_14455	0.49	-0.3
3,054,075	-		IAI47_14455	0.49	+0.1
3,054,075	-		IAI47_14455	0.49	-1.0
3,054,075	-		IAI47_14455	0.49	+0.5
3,054,075	-		IAI47_14455	0.49	-0.2
3,054,075	-		IAI47_14455	0.49	-1.4
3,054,075	-		IAI47_14455	0.49	+0.1
3,054,075	-		IAI47_14455	0.49	-0.9
3,054,200	+		IAI47_14455	0.63	+0.9
3,054,201	-		IAI47_14455	0.63	-0.2
3,054,201	-		IAI47_14455	0.63	-0.5
3,054,201	-		IAI47_14455	0.63	+1.5
3,054,201	-		IAI47_14455	0.63	+0.4
3,054,282	+		IAI47_14455	0.72	+1.5
3,054,282	+		IAI47_14455	0.72	+1.6
3,054,283	-		IAI47_14455	0.72	+1.0