Strain Fitness in Pantoea sp. MT58 around IAI47_13145

Experiment: Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
2,777,988	-		IAI47_13140	0.43	-1.0
2,777,988	-		IAI47_13140	0.43	-0.0
2,777,988	-		IAI47_13140	0.43	-0.4
2,777,991	+		IAI47_13140	0.43	+0.5
2,777,991	+		IAI47_13140	0.43	-0.2
2,777,991	+		IAI47_13140	0.43	-0.2
2,777,991	+		IAI47_13140	0.43	+0.2
2,777,992	-		IAI47_13140	0.43	-1.1
2,778,006	+		IAI47_13140	0.44	+0.7
2,778,068	-		IAI47_13140	0.49	-1.1
2,778,068	-		IAI47_13140	0.49	-0.8
2,778,076	-		IAI47_13140	0.50	+0.5
2,778,105	+		IAI47_13140	0.52	+2.5
2,778,105	+		IAI47_13140	0.52	-1.5
2,778,105	+		IAI47_13140	0.52	-1.6
2,778,105	+		IAI47_13140	0.52	-1.0
2,778,105	+		IAI47_13140	0.52	-0.8
2,778,105	+		IAI47_13140	0.52	-0.7
2,778,105	+		IAI47_13140	0.52	+0.7
2,778,106	-		IAI47_13140	0.52	-1.4
2,778,106	-		IAI47_13140	0.52	+0.0
2,778,106	-		IAI47_13140	0.52	-1.6
2,778,106	-		IAI47_13140	0.52	+0.9
2,778,106	-		IAI47_13140	0.52	-2.0
2,778,106	-		IAI47_13140	0.52	-0.3
2,778,253	-		IAI47_13140	0.64	-0.5
2,778,253	-		IAI47_13140	0.64	-1.3
2,778,276	+		IAI47_13140	0.66	+0.6
2,778,276	+		IAI47_13140	0.66	+0.0
2,778,297	+		IAI47_13140	0.68	-0.3
2,778,297	+		IAI47_13140	0.68	-0.5
2,778,298	-		IAI47_13140	0.68	+1.8
2,778,298	-		IAI47_13140	0.68	-0.4
2,778,388	+		IAI47_13140	0.75	-0.4
2,778,388	+		IAI47_13140	0.75	-1.0
2,778,388	+		IAI47_13140	0.75	-1.7
2,778,388	+		IAI47_13140	0.75	-0.4
2,778,388	+		IAI47_13140	0.75	-0.4
2,778,388	+		IAI47_13140	0.75	-1.1
2,778,389	-		IAI47_13140	0.75	-1.0
2,778,389	-		IAI47_13140	0.75	+0.2
2,778,389	-		IAI47_13140	0.75	+2.6
2,778,389	-		IAI47_13140	0.75	+1.0
2,778,398	+		IAI47_13140	0.76	-0.3
2,778,399	-		IAI47_13140	0.76	+0.1
2,778,421	-		IAI47_13140	0.78	+0.1
2,778,665	+				+0.7
2,778,666	-				+1.0
2,778,694	+				-1.7
2,778,694	+				-0.9
2,778,694	+				+0.6
2,778,694	+				+0.0
2,778,694	+				-0.4
2,778,694	+				+0.5
2,778,695	-				+0.5
2,778,695	-				+1.3
2,778,695	-				+1.2
2,778,710	+				+0.8
2,778,725	+				+0.6
2,778,726	-				+0.4
2,778,726	-				+2.6
2,778,726	-				-1.1
2,778,733	+				+0.4
2,778,734	-				+0.9
2,778,787	-		IAI47_13145	0.12	-1.4
2,778,844	+		IAI47_13145	0.19	-0.1
2,778,892	-		IAI47_13145	0.26	-1.6
2,778,906	+		IAI47_13145	0.28	-0.3
2,778,906	+		IAI47_13145	0.28	-0.6
2,778,907	-		IAI47_13145	0.28	-1.0
2,778,907	-		IAI47_13145	0.28	-0.4
2,778,942	+		IAI47_13145	0.32	-0.3
2,779,113	+		IAI47_13145	0.55	-0.6
2,779,113	+		IAI47_13145	0.55	-0.4
2,779,114	-		IAI47_13145	0.55	+0.5
2,779,187	+		IAI47_13145	0.65	+0.9
2,779,188	-		IAI47_13145	0.65	-0.7
2,779,188	-		IAI47_13145	0.65	+1.0
2,779,188	-		IAI47_13145	0.65	+0.8
2,779,191	+		IAI47_13145	0.65	+0.8
2,779,191	+		IAI47_13145	0.65	+1.0
2,779,191	+		IAI47_13145	0.65	-0.4
2,779,192	-		IAI47_13145	0.65	+0.6
2,779,326	+		IAI47_13145	0.83	-1.9
2,779,327	-		IAI47_13145	0.83	+0.1
2,779,327	-		IAI47_13145	0.83	-0.6
2,779,327	-		IAI47_13145	0.83	-1.5
2,779,331	+		IAI47_13145	0.84	+1.6
2,779,332	-		IAI47_13145	0.84	+0.0
2,779,332	-		IAI47_13145	0.84	+2.1
2,779,375	+		IAI47_13145	0.89	-1.0
2,779,376	-		IAI47_13145	0.89	-0.1
2,779,376	-		IAI47_13145	0.89	+0.2
2,779,376	-		IAI47_13145	0.89	+0.6
2,779,376	-		IAI47_13145	0.89	+1.9
2,779,376	-		IAI47_13145	0.89	-0.3
2,779,376	-		IAI47_13145	0.89	+2.5
2,779,376	-		IAI47_13145	0.89	-1.0
2,779,376	-		IAI47_13145	0.89	-0.8
2,779,467	+				+0.8
2,779,467	+				+0.8
2,779,468	-				+1.1
2,779,493	+				-0.5
2,779,510	-				-1.3
2,779,510	-				-1.7
2,779,510	-				+2.9
2,779,510	-				-1.1
2,779,510	-				-0.8
2,779,510	-				+0.6
2,779,510	-				+1.3
2,779,510	-				-1.4
2,779,518	-				-0.1
2,779,617	+				+1.7
2,779,655	+				-0.3
2,779,655	+				+0.4
2,779,655	+				+0.3
2,779,655	+				+2.2
2,779,655	+				-0.1
2,779,656	-				+0.5
2,779,656	-				+0.2
2,779,656	-				+0.8
2,779,656	-				+0.0
2,779,675	-				-0.0
2,779,675	-				-1.5
2,779,675	-				-0.4
2,779,675	-				-0.6
2,779,675	-				-0.4
2,779,675	-				+0.1
2,779,675	-				-0.9
2,779,675	-				+0.2
2,779,675	-				+0.7
2,779,702	-				+1.0
2,779,702	-				-0.8
2,779,871	+				-0.2
2,779,871	+				+0.5
2,779,872	-				-1.9
2,779,872	-				+0.8
2,779,876	+				-1.2
2,779,876	+				-0.2
2,779,876	+				+0.8
2,779,876	+				+0.1
2,779,876	+				+0.9
2,779,876	+				-1.0
2,779,876	+				-0.1
2,779,876	+				-0.9
2,779,877	-				-0.2
2,779,877	-				+0.6
2,779,877	-				-2.3
2,779,877	-				-0.8
2,779,877	-				-1.2
2,779,877	-				-0.3
2,779,877	-				+0.5
2,779,877	-				-0.2
2,779,877	-				-1.0
2,779,877	-				+1.5
2,779,877	-				+0.0
2,779,877	-				+1.5
2,779,920	+				-0.3
2,779,920	+				-1.3
2,779,921	-				-0.1
2,779,921	-				+1.0
2,779,980	+				-0.6
2,780,007	+				-0.2
2,780,007	+				+1.0
2,780,007	+				-1.4
2,780,008	-				-1.8
2,780,008	-				+0.2
2,780,016	+				-0.2
2,780,016	+				-0.1
2,780,017	-				-1.8
2,780,017	-				-1.4
2,780,017	-				-0.8
2,780,020	+				+2.0
2,780,020	+				-0.1
2,780,021	-				+1.0
2,780,021	-				-1.6
2,780,124	+				+1.0
2,780,124	+				-0.3
2,780,124	+				+0.2
2,780,124	+				+0.0
2,780,124	+				+0.4
2,780,124	+				-0.6
2,780,124	+				-0.5
2,780,124	+				+0.2
2,780,124	+				+1.6
2,780,124	+				-1.0
2,780,124	+				-0.8
2,780,124	+				+1.0
2,780,124	+				+1.6
2,780,124	+				+0.0
2,780,125	-				-1.2
2,780,125	-				-1.7
2,780,125	-				-0.6
2,780,125	-				+0.6
2,780,125	-				+0.2
2,780,125	-				+1.0
2,780,125	-				-1.0
2,780,125	-				-0.1
2,780,125	-				-0.9
2,780,125	-				-0.9
2,780,141	-				+1.3
2,780,191	+		IAI47_13150	0.13	+1.0
2,780,236	+		IAI47_13150	0.16	-0.3
2,780,236	+		IAI47_13150	0.16	-1.8
2,780,236	+		IAI47_13150	0.16	+2.6
2,780,236	+		IAI47_13150	0.16	-0.3
2,780,236	+		IAI47_13150	0.16	-1.7
2,780,236	+		IAI47_13150	0.16	-1.2
2,780,236	+		IAI47_13150	0.16	+1.9
2,780,237	-		IAI47_13150	0.16	+1.6
2,780,237	-		IAI47_13150	0.16	-0.1
2,780,237	-		IAI47_13150	0.16	+1.6
2,780,237	-		IAI47_13150	0.16	+1.2
2,780,237	-		IAI47_13150	0.16	+1.5
2,780,237	-		IAI47_13150	0.16	-0.7
2,780,237	-		IAI47_13150	0.16	-0.2
2,780,237	-		IAI47_13150	0.16	-1.3
2,780,237	-		IAI47_13150	0.16	-0.3
2,780,237	-		IAI47_13150	0.16	+2.0
2,780,237	-		IAI47_13150	0.16	-0.6
2,780,237	-		IAI47_13150	0.16	+0.3
2,780,237	-		IAI47_13150	0.16	-1.6
2,780,237	-		IAI47_13150	0.16	+1.6
2,780,278	+		IAI47_13150	0.19	+0.5
2,780,278	+		IAI47_13150	0.19	+0.1
2,780,279	-		IAI47_13150	0.19	+3.0
2,780,279	-		IAI47_13150	0.19	+1.0
2,780,279	-		IAI47_13150	0.19	-0.0
2,780,279	-		IAI47_13150	0.19	-0.8
2,780,279	-		IAI47_13150	0.19	-0.1
2,780,281	+		IAI47_13150	0.19	-0.2
2,780,281	+		IAI47_13150	0.19	-1.9
2,780,281	+		IAI47_13150	0.19	+0.2
2,780,281	+		IAI47_13150	0.19	+1.4
2,780,281	+		IAI47_13150	0.19	-0.1
2,780,281	+		IAI47_13150	0.19	+0.1
2,780,282	-		IAI47_13150	0.19	-1.6
2,780,282	-		IAI47_13150	0.19	+0.4
2,780,282	-		IAI47_13150	0.19	+0.3
2,780,282	-		IAI47_13150	0.19	+0.8
2,780,373	-		IAI47_13150	0.25	-0.1
2,780,373	-		IAI47_13150	0.25	-0.3
2,780,373	-		IAI47_13150	0.25	-1.2
2,780,373	-		IAI47_13150	0.25	+1.4
2,780,415	+		IAI47_13150	0.27	+1.4
2,780,415	+		IAI47_13150	0.27	-1.1
2,780,415	+		IAI47_13150	0.27	+1.8
2,780,416	-		IAI47_13150	0.27	+2.4
2,780,416	-		IAI47_13150	0.27	-0.4
2,780,416	-		IAI47_13150	0.27	+0.7
2,780,416	-		IAI47_13150	0.27	+0.9
2,780,418	+		IAI47_13150	0.27	-0.8
2,780,446	+		IAI47_13150	0.29	+1.2
2,780,446	+		IAI47_13150	0.29	-0.4
2,780,446	+		IAI47_13150	0.29	+0.9
2,780,446	+		IAI47_13150	0.29	-3.0
2,780,447	-		IAI47_13150	0.29	+0.9
2,780,447	-		IAI47_13150	0.29	+0.6
2,780,447	-		IAI47_13150	0.29	+2.0
2,780,447	-		IAI47_13150	0.29	+0.1
2,780,447	-		IAI47_13150	0.29	+1.6
2,780,447	-		IAI47_13150	0.29	+0.3
2,780,447	-		IAI47_13150	0.29	+0.2