Strain Fitness in Pantoea sp. MT58 around IAI47_13425

Experiment: Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
2,848,794	-		IAI47_13420	0.43	+0.1
2,848,794	-		IAI47_13420	0.43	+2.0
2,848,812	+		IAI47_13420	0.44	-0.0
2,848,813	-		IAI47_13420	0.44	-1.0
2,848,864	+		IAI47_13420	0.47	+0.1
2,848,934	+		IAI47_13420	0.51	-0.3
2,848,934	+		IAI47_13420	0.51	+0.6
2,848,935	-		IAI47_13420	0.51	-0.2
2,848,935	-		IAI47_13420	0.51	+1.2
2,848,935	-		IAI47_13420	0.51	-0.5
2,848,935	-		IAI47_13420	0.51	+0.2
2,848,935	-		IAI47_13420	0.51	+0.0
2,848,935	-		IAI47_13420	0.51	+0.7
2,848,935	-		IAI47_13420	0.51	-0.2
2,848,935	-		IAI47_13420	0.51	-0.3
2,848,968	+		IAI47_13420	0.54	-1.4
2,848,969	-		IAI47_13420	0.54	-0.9
2,848,969	-		IAI47_13420	0.54	+0.7
2,849,029	+		IAI47_13420	0.57	+1.1
2,849,029	+		IAI47_13420	0.57	+0.8
2,849,030	-		IAI47_13420	0.57	-0.4
2,849,030	-		IAI47_13420	0.57	+2.0
2,849,114	+		IAI47_13420	0.63	+0.5
2,849,114	+		IAI47_13420	0.63	+0.3
2,849,115	-		IAI47_13420	0.63	+0.2
2,849,115	-		IAI47_13420	0.63	+0.0
2,849,115	-		IAI47_13420	0.63	+0.2
2,849,167	+		IAI47_13420	0.66	+0.1
2,849,168	-		IAI47_13420	0.66	-1.5
2,849,204	+		IAI47_13420	0.68	+1.3
2,849,204	+		IAI47_13420	0.68	-1.9
2,849,205	-		IAI47_13420	0.68	+0.5
2,849,205	-		IAI47_13420	0.68	+1.7
2,849,205	-		IAI47_13420	0.68	+4.6
2,849,205	-		IAI47_13420	0.68	-0.2
2,849,205	-		IAI47_13420	0.68	+0.8
2,849,244	+		IAI47_13420	0.71	-1.1
2,849,244	+		IAI47_13420	0.71	-0.9
2,849,244	+		IAI47_13420	0.71	-0.7
2,849,244	+		IAI47_13420	0.71	-1.3
2,849,244	+		IAI47_13420	0.71	+0.0
2,849,244	+		IAI47_13420	0.71	+0.2
2,849,244	+		IAI47_13420	0.71	-1.2
2,849,244	+		IAI47_13420	0.71	-1.1
2,849,244	+		IAI47_13420	0.71	-0.9
2,849,245	-		IAI47_13420	0.71	+0.8
2,849,245	-		IAI47_13420	0.71	-1.8
2,849,245	-		IAI47_13420	0.71	+1.4
2,849,245	-		IAI47_13420	0.71	+0.9
2,849,245	-		IAI47_13420	0.71	-0.4
2,849,245	-		IAI47_13420	0.71	-0.1
2,849,245	-		IAI47_13420	0.71	+0.6
2,849,245	-		IAI47_13420	0.71	-0.1
2,849,245	-		IAI47_13420	0.71	+2.7
2,849,264	+		IAI47_13420	0.72	+0.7
2,849,264	+		IAI47_13420	0.72	-0.3
2,849,264	+		IAI47_13420	0.72	+1.1
2,849,265	-		IAI47_13420	0.72	+2.6
2,849,318	+		IAI47_13420	0.75	+0.1
2,849,318	+		IAI47_13420	0.75	+0.7
2,849,318	+		IAI47_13420	0.75	+0.0
2,849,319	-		IAI47_13420	0.75	+0.3
2,849,319	-		IAI47_13420	0.75	+0.6
2,849,472	+		IAI47_13420	0.85	+1.3
2,849,472	+		IAI47_13420	0.85	-2.4
2,849,473	-		IAI47_13420	0.85	+0.7
2,849,473	-		IAI47_13420	0.85	+0.5
2,849,473	-		IAI47_13420	0.85	+1.0
2,849,473	-		IAI47_13420	0.85	+1.9
2,849,473	-		IAI47_13420	0.85	+1.3
2,849,516	-		IAI47_13420	0.88	+0.5
2,849,516	-		IAI47_13420	0.88	+1.8
2,849,552	+				-0.7
2,849,552	+				+0.1
2,849,553	-				+0.5
2,849,553	-				-0.4
2,849,628	-				-0.7
2,849,647	+				-0.4
2,849,650	+				+0.7
2,849,650	+				-0.7
2,849,650	+				+0.6
2,849,650	+				+2.7
2,849,650	+				+1.0
2,849,650	+				+0.3
2,849,650	+				-0.5
2,849,650	+				-0.6
2,849,651	-				-0.9
2,849,651	-				+0.1
2,849,651	-				-1.5
2,849,651	-				+0.3
2,849,651	-				-0.4
2,849,651	-				+1.6
2,849,651	-				-0.0
2,849,667	-				-0.9
2,849,667	-				-0.6
2,849,688	+				-1.0
2,849,689	-				+1.4
2,849,699	+				-0.4
2,849,759	+				+1.3
2,849,759	+				-0.9
2,849,759	+				-0.6
2,849,759	+				+0.9
2,849,760	-				+0.5
2,849,788	-				+0.5
2,849,800	+				+0.9
2,849,800	+				-0.4
2,849,807	+				-1.1
2,849,807	+				-0.7
2,849,808	-				+0.7
2,849,842	-				-0.3
2,849,925	+		IAI47_13425	0.14	-2.5
2,849,925	+		IAI47_13425	0.14	+2.2
2,849,925	+		IAI47_13425	0.14	+1.9
2,849,925	+		IAI47_13425	0.14	+2.2
2,849,925	+		IAI47_13425	0.14	-1.0
2,849,925	+		IAI47_13425	0.14	-1.8
2,849,925	+		IAI47_13425	0.14	-0.7
2,849,926	-		IAI47_13425	0.14	+0.7
2,849,969	+		IAI47_13425	0.17	-1.5
2,849,970	-		IAI47_13425	0.18	+1.2
2,849,970	-		IAI47_13425	0.18	+1.8
2,850,067	+		IAI47_13425	0.26	-1.0
2,850,068	-		IAI47_13425	0.26	-1.4
2,850,068	-		IAI47_13425	0.26	+0.5
2,850,068	-		IAI47_13425	0.26	+0.2
2,850,068	-		IAI47_13425	0.26	+0.2
2,850,068	-		IAI47_13425	0.26	+0.0
2,850,105	-		IAI47_13425	0.29	-0.6
2,850,105	-		IAI47_13425	0.29	+0.1
2,850,136	+		IAI47_13425	0.31	+1.7
2,850,136	+		IAI47_13425	0.31	+1.0
2,850,136	+		IAI47_13425	0.31	+1.0
2,850,137	-		IAI47_13425	0.32	+0.5
2,850,137	-		IAI47_13425	0.32	+1.2
2,850,195	+		IAI47_13425	0.36	+1.0
2,850,196	-		IAI47_13425	0.37	-0.3
2,850,235	+		IAI47_13425	0.40	-0.4
2,850,236	-		IAI47_13425	0.40	+0.5
2,850,236	-		IAI47_13425	0.40	-0.6
2,850,236	-		IAI47_13425	0.40	+0.6
2,850,236	-		IAI47_13425	0.40	-0.5
2,850,238	+		IAI47_13425	0.40	+0.1
2,850,238	+		IAI47_13425	0.40	+1.4
2,850,238	+		IAI47_13425	0.40	+0.9
2,850,238	+		IAI47_13425	0.40	-2.8
2,850,238	+		IAI47_13425	0.40	-1.6
2,850,238	+		IAI47_13425	0.40	+1.7
2,850,239	-		IAI47_13425	0.40	-0.0
2,850,239	-		IAI47_13425	0.40	-0.4
2,850,239	-		IAI47_13425	0.40	-0.9
2,850,239	-		IAI47_13425	0.40	+2.5
2,850,239	-		IAI47_13425	0.40	+0.2
2,850,239	-		IAI47_13425	0.40	+0.2
2,850,239	-		IAI47_13425	0.40	+0.3
2,850,239	-		IAI47_13425	0.40	+1.9
2,850,291	+		IAI47_13425	0.45	+2.4
2,850,291	+		IAI47_13425	0.45	-0.6
2,850,292	-		IAI47_13425	0.45	-1.5
2,850,292	-		IAI47_13425	0.45	+0.4
2,850,292	-		IAI47_13425	0.45	-1.2
2,850,292	-		IAI47_13425	0.45	-0.3
2,850,480	+		IAI47_13425	0.60	-0.3
2,850,480	+		IAI47_13425	0.60	+1.0
2,850,481	-		IAI47_13425	0.61	-0.3
2,850,481	-		IAI47_13425	0.61	-0.8
2,850,481	-		IAI47_13425	0.61	+0.7
2,850,481	-		IAI47_13425	0.61	-2.1
2,850,481	-		IAI47_13425	0.61	-0.0
2,850,535	+		IAI47_13425	0.65	+1.7
2,850,536	-		IAI47_13425	0.65	+0.8
2,850,553	+		IAI47_13425	0.67	+2.4
2,850,553	+		IAI47_13425	0.67	+0.2
2,850,554	-		IAI47_13425	0.67	+2.5
2,850,658	+		IAI47_13425	0.75	-2.4
2,850,658	+		IAI47_13425	0.75	+0.7
2,850,771	+		IAI47_13425	0.85	-1.6
2,850,785	-		IAI47_13425	0.86	-0.5
2,850,800	-		IAI47_13425	0.87	+0.7
2,850,843	-				-0.9
2,850,843	-				-0.4
2,850,870	+				-0.2
2,850,870	+				+1.0
2,850,870	+				-2.1
2,850,870	+				-0.6
2,850,870	+				-1.8
2,850,871	-				-1.1
2,850,871	-				-0.5
2,850,871	-				+1.3
2,850,871	-				+0.6
2,850,889	+				-1.4
2,850,889	+				+2.1
2,850,889	+				+0.5
2,850,889	+				+1.3
2,850,889	+				-0.6
2,850,889	+				-0.2
2,850,889	+				+0.4
2,850,890	-				+0.3
2,850,890	-				+0.6
2,850,890	-				+1.1
2,850,890	-				+0.9
2,850,890	-				-0.9
2,850,932	+				-0.9
2,850,933	-				-0.4
2,850,933	-				-0.2
2,850,933	-				+0.0
2,850,949	+				-1.8
2,850,949	+				+0.8
2,850,949	+				-0.0
2,850,949	+				-2.5
2,850,949	+				+0.1
2,850,949	+				-0.9
2,850,949	+				+0.5
2,850,949	+				-0.1
2,850,949	+				+0.8
2,850,950	-				+0.2
2,850,950	-				+1.3
2,850,950	-				-0.5
2,850,950	-				-0.1
2,850,950	-				+1.7
2,850,950	-				-0.7
2,850,950	-				+1.0
2,850,950	-				+1.3
2,850,950	-				-1.9
2,850,950	-				-1.1
2,850,950	-				-1.8
2,850,950	-				-0.5
2,850,950	-				+2.1
2,850,950	-				-0.3
2,850,958	-				-1.2
2,850,963	+				-0.7
2,850,963	+				+1.1
2,850,963	+				+3.6
2,850,964	-				-1.4
2,850,964	-				-0.8
2,850,964	-				-0.5
2,850,982	+				-0.8
2,850,983	-				+0.9
2,850,983	-				+1.6
2,850,983	-				-0.1
2,850,983	-				+1.4
2,850,983	-				-2.3
2,850,984	+				+0.2
2,850,984	+				-1.1
2,850,984	+				-1.9
2,850,985	-				-0.1
2,850,985	-				+0.9
2,850,985	-				+0.4
2,850,985	-				-0.7
2,850,985	-				-0.8
2,850,985	-				-1.1
2,851,033	-				+0.7
2,851,065	-				+0.5
2,851,065	-				+0.7
2,851,101	+				+0.5
2,851,102	-				+0.5
2,851,102	-				+3.8
2,851,121	-		IAI47_13430	0.11	+0.5
2,851,121	-		IAI47_13430	0.11	-0.1
2,851,121	-		IAI47_13430	0.11	+0.8
2,851,168	+		IAI47_13430	0.16	+0.2
2,851,168	+		IAI47_13430	0.16	-1.1
2,851,168	+		IAI47_13430	0.16	-0.8
2,851,169	-		IAI47_13430	0.16	-1.9
2,851,169	-		IAI47_13430	0.16	-1.6
2,851,169	-		IAI47_13430	0.16	-1.8
2,851,169	-		IAI47_13430	0.16	+0.3
2,851,169	-		IAI47_13430	0.16	+0.3
2,851,205	-		IAI47_13430	0.19	+0.5
2,851,205	-		IAI47_13430	0.19	-0.3
2,851,255	+		IAI47_13430	0.25	-0.4
2,851,255	+		IAI47_13430	0.25	-1.9
2,851,255	+		IAI47_13430	0.25	+0.8
2,851,256	-		IAI47_13430	0.25	+0.8
2,851,256	-		IAI47_13430	0.25	-0.4
2,851,308	+		IAI47_13430	0.30	-1.6
2,851,308	+		IAI47_13430	0.30	-0.8
2,851,335	-		IAI47_13430	0.33	-0.3
2,851,335	-		IAI47_13430	0.33	+1.7
2,851,444	+		IAI47_13430	0.45	+2.7
2,851,445	-		IAI47_13430	0.45	+1.3
2,851,557	+		IAI47_13430	0.56	-1.1
2,851,557	+		IAI47_13430	0.56	+1.3
2,851,631	+		IAI47_13430	0.64	+0.1
2,851,631	+		IAI47_13430	0.64	+0.4
2,851,631	+		IAI47_13430	0.64	+0.3
2,851,671	-		IAI47_13430	0.68	-0.2
2,851,772	+		IAI47_13430	0.79	-1.0
2,851,772	+		IAI47_13430	0.79	+0.7
2,851,772	+		IAI47_13430	0.79	+0.6
2,851,773	-		IAI47_13430	0.79	-1.3
2,851,773	-		IAI47_13430	0.79	+0.8
2,851,809	-		IAI47_13430	0.83	-1.7
2,851,831	+		IAI47_13430	0.85	+0.0
2,851,832	-		IAI47_13430	0.85	-0.2
2,851,832	-		IAI47_13430	0.85	-1.2
2,851,855	-		IAI47_13430	0.88	+1.8
2,851,895	-				+0.1
2,851,895	-				+0.3