Strain Fitness in Pantoea sp. MT58 around IAI47_12510

Experiment: Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
2,635,811	-				+1.4
2,635,889	+				-0.7
2,635,889	+				-1.2
2,635,890	-				-0.7
2,635,890	-				-2.4
2,635,969	+		IAI47_12505	0.19	-1.6
2,635,969	+		IAI47_12505	0.19	+1.1
2,635,970	-		IAI47_12505	0.19	-0.7
2,635,970	-		IAI47_12505	0.19	-2.7
2,635,989	+		IAI47_12505	0.22	+4.0
2,635,989	+		IAI47_12505	0.22	+0.7
2,635,989	+		IAI47_12505	0.22	+1.1
2,635,990	-		IAI47_12505	0.22	-1.0
2,635,990	-		IAI47_12505	0.22	-1.0
2,635,994	+		IAI47_12505	0.23	+0.6
2,635,994	+		IAI47_12505	0.23	-2.1
2,635,994	+		IAI47_12505	0.23	+3.3
2,635,994	+		IAI47_12505	0.23	-0.5
2,635,994	+		IAI47_12505	0.23	-1.9
2,635,995	-		IAI47_12505	0.23	+1.4
2,635,995	-		IAI47_12505	0.23	+1.1
2,635,995	-		IAI47_12505	0.23	+2.0
2,635,995	-		IAI47_12505	0.23	-0.4
2,635,995	-		IAI47_12505	0.23	+0.4
2,635,995	-		IAI47_12505	0.23	-0.1
2,635,995	-		IAI47_12505	0.23	-0.1
2,636,054	+		IAI47_12505	0.32	-1.2
2,636,055	-		IAI47_12505	0.33	-0.6
2,636,108	+		IAI47_12505	0.41	+1.8
2,636,108	+		IAI47_12505	0.41	+2.1
2,636,108	+		IAI47_12505	0.41	-0.4
2,636,198	-		IAI47_12505	0.55	-0.5
2,636,198	-		IAI47_12505	0.55	+1.5
2,636,207	+		IAI47_12505	0.56	-0.2
2,636,276	+		IAI47_12505	0.67	-0.6
2,636,277	-		IAI47_12505	0.67	-1.0
2,636,277	-		IAI47_12505	0.67	+0.8
2,636,277	-		IAI47_12505	0.67	+1.1
2,636,277	-		IAI47_12505	0.67	+0.3
2,636,290	+		IAI47_12505	0.69	-0.1
2,636,290	+		IAI47_12505	0.69	+1.2
2,636,290	+		IAI47_12505	0.69	+2.4
2,636,290	+		IAI47_12505	0.69	-0.8
2,636,290	+		IAI47_12505	0.69	+0.1
2,636,290	+		IAI47_12505	0.69	-1.7
2,636,291	-		IAI47_12505	0.70	+0.7
2,636,291	-		IAI47_12505	0.70	-0.9
2,636,291	-		IAI47_12505	0.70	+0.2
2,636,291	-		IAI47_12505	0.70	-0.3
2,636,314	+		IAI47_12505	0.73	+1.1
2,636,315	-		IAI47_12505	0.73	+0.3
2,636,315	-		IAI47_12505	0.73	+0.7
2,636,315	-		IAI47_12505	0.73	-0.1
2,636,318	-		IAI47_12505	0.74	+0.4
2,636,318	-		IAI47_12505	0.74	-0.0
2,636,360	+		IAI47_12505	0.81	-2.5
2,636,361	-		IAI47_12505	0.81	+2.0
2,636,361	-		IAI47_12505	0.81	+0.6
2,636,403	+		IAI47_12505	0.87	-0.4
2,636,404	-		IAI47_12505	0.87	-0.3
2,636,418	+		IAI47_12505	0.90	+1.7
2,636,418	+		IAI47_12505	0.90	-1.6
2,636,420	+				-0.9
2,636,421	-				+0.5
2,636,421	-				-2.0
2,636,477	+				+0.3
2,636,490	-				-0.9
2,636,490	-				+0.1
2,636,518	+				-0.3
2,636,518	+				+2.7
2,636,518	+				-0.8
2,636,518	+				+1.1
2,636,518	+				-1.3
2,636,518	+				+0.9
2,636,518	+				-0.0
2,636,518	+				+0.7
2,636,519	-				+1.6
2,636,519	-				+3.4
2,636,519	-				-0.5
2,636,519	-				-0.3
2,636,519	-				+0.9
2,636,519	-				-0.7
2,636,519	-				-0.3
2,636,579	+				+2.4
2,636,579	+				-0.9
2,636,580	-				+0.2
2,636,580	-				+0.1
2,636,580	-				+1.4
2,636,634	+				+0.1
2,636,634	+				-1.1
2,636,634	+				-0.4
2,636,635	-				+1.8
2,636,635	-				-1.8
2,636,635	-				+1.0
2,636,635	-				+0.4
2,636,665	+				+0.7
2,636,666	-				+1.1
2,636,760	+				+1.3
2,636,760	+				-0.4
2,636,760	+				-0.2
2,636,760	+				+2.3
2,636,761	-				-0.6
2,636,761	-				-1.6
2,636,797	+				-0.8
2,636,797	+				+0.1
2,636,798	-				+0.4
2,636,798	-				+1.3
2,636,798	-				+1.2
2,636,820	-				-2.1
2,636,820	-				+0.1
2,636,820	-				+1.1
2,636,820	-				-0.3
2,636,856	+				+0.4
2,636,856	+				-0.5
2,636,857	-				+2.7
2,636,857	-				+0.5
2,636,857	-				+0.6
2,636,857	-				-1.0
2,636,907	+		IAI47_12510	0.11	+0.4
2,636,907	+		IAI47_12510	0.11	-0.1
2,636,907	+		IAI47_12510	0.11	-0.5
2,636,908	-		IAI47_12510	0.11	-0.1
2,636,908	-		IAI47_12510	0.11	+0.0
2,636,978	+		IAI47_12510	0.17	+1.5
2,636,978	+		IAI47_12510	0.17	+1.9
2,637,029	+		IAI47_12510	0.22	-0.6
2,637,030	-		IAI47_12510	0.22	-1.2
2,637,030	-		IAI47_12510	0.22	-0.1
2,637,030	-		IAI47_12510	0.22	-1.1
2,637,030	-		IAI47_12510	0.22	+3.3
2,637,039	+		IAI47_12510	0.23	+2.0
2,637,040	-		IAI47_12510	0.23	+1.5
2,637,040	-		IAI47_12510	0.23	+1.1
2,637,040	-		IAI47_12510	0.23	+3.8
2,637,140	-		IAI47_12510	0.32	-0.3
2,637,162	+		IAI47_12510	0.34	-0.5
2,637,162	+		IAI47_12510	0.34	+0.5
2,637,163	-		IAI47_12510	0.34	-0.1
2,637,163	-		IAI47_12510	0.34	-2.4
2,637,195	+		IAI47_12510	0.37	-0.7
2,637,211	-		IAI47_12510	0.39	+1.7
2,637,217	-		IAI47_12510	0.39	-0.3
2,637,217	-		IAI47_12510	0.39	-0.6
2,637,275	+		IAI47_12510	0.44	-1.4
2,637,275	+		IAI47_12510	0.44	+1.1
2,637,275	+		IAI47_12510	0.44	-0.2
2,637,342	-		IAI47_12510	0.51	+0.9
2,637,397	-		IAI47_12510	0.56	+0.7
2,637,397	-		IAI47_12510	0.56	-0.1
2,637,501	+		IAI47_12510	0.65	+1.0
2,637,501	+		IAI47_12510	0.65	+1.9
2,637,501	+		IAI47_12510	0.65	+0.1
2,637,501	+		IAI47_12510	0.65	-2.2
2,637,501	+		IAI47_12510	0.65	+0.4
2,637,501	+		IAI47_12510	0.65	-0.4
2,637,502	-		IAI47_12510	0.65	+1.1
2,637,502	-		IAI47_12510	0.65	-0.5
2,637,502	-		IAI47_12510	0.65	+0.7
2,637,502	-		IAI47_12510	0.65	+0.3
2,637,502	-		IAI47_12510	0.65	+1.1
2,637,512	+		IAI47_12510	0.66	+1.8
2,637,512	+		IAI47_12510	0.66	+0.3
2,637,512	+		IAI47_12510	0.66	-0.4
2,637,513	-		IAI47_12510	0.66	+0.2
2,637,513	-		IAI47_12510	0.66	+0.1
2,637,552	-		IAI47_12510	0.70	-0.2
2,637,564	+		IAI47_12510	0.71	+0.3
2,637,564	+		IAI47_12510	0.71	-0.8
2,637,564	+		IAI47_12510	0.71	+0.7
2,637,564	+		IAI47_12510	0.71	-0.0
2,637,564	+		IAI47_12510	0.71	+0.5
2,637,565	-		IAI47_12510	0.71	+0.5
2,637,565	-		IAI47_12510	0.71	-0.1
2,637,565	-		IAI47_12510	0.71	-1.2
2,637,565	-		IAI47_12510	0.71	-0.1
2,637,565	-		IAI47_12510	0.71	+0.1
2,637,565	-		IAI47_12510	0.71	-0.7
2,637,565	-		IAI47_12510	0.71	-0.8
2,637,649	+		IAI47_12510	0.79	+0.2
2,637,649	+		IAI47_12510	0.79	+1.7
2,637,649	+		IAI47_12510	0.79	+1.9
2,637,649	+		IAI47_12510	0.79	+2.1
2,637,649	+		IAI47_12510	0.79	+0.3
2,637,649	+		IAI47_12510	0.79	-0.2
2,637,650	-		IAI47_12510	0.79	-1.1
2,637,683	+		IAI47_12510	0.82	+0.7
2,637,683	+		IAI47_12510	0.82	+0.7
2,637,683	+		IAI47_12510	0.82	+0.2
2,637,684	-		IAI47_12510	0.82	-0.3
2,637,721	+		IAI47_12510	0.85	-0.6
2,637,751	+		IAI47_12510	0.88	+0.5
2,637,751	+		IAI47_12510	0.88	-1.3
2,637,752	-		IAI47_12510	0.88	-0.9
2,637,752	-		IAI47_12510	0.88	-1.0
2,637,752	-		IAI47_12510	0.88	+1.0
2,637,752	-		IAI47_12510	0.88	+1.7
2,637,800	+				+0.9
2,637,800	+				+0.1
2,637,845	+				-0.4
2,637,846	-				-0.5
2,637,846	-				-1.0
2,637,893	+				-0.2
2,637,904	+				+0.8
2,637,991	+		IAI47_12515	0.15	+0.2
2,637,992	-		IAI47_12515	0.16	-0.1
2,638,004	+		IAI47_12515	0.17	+0.2
2,638,005	-		IAI47_12515	0.17	+2.3
2,638,022	+		IAI47_12515	0.20	+2.6
2,638,023	-		IAI47_12515	0.20	+0.3
2,638,151	+		IAI47_12515	0.38	+1.2
2,638,151	+		IAI47_12515	0.38	-1.0
2,638,151	+		IAI47_12515	0.38	+1.2
2,638,151	+		IAI47_12515	0.38	-2.2
2,638,151	+		IAI47_12515	0.38	+0.8
2,638,152	-		IAI47_12515	0.38	-0.4
2,638,152	-		IAI47_12515	0.38	+0.1
2,638,152	-		IAI47_12515	0.38	-0.8
2,638,152	-		IAI47_12515	0.38	+0.9
2,638,180	+		IAI47_12515	0.42	-1.6
2,638,204	-		IAI47_12515	0.45	+0.2
2,638,337	+		IAI47_12515	0.64	-1.7
2,638,337	+		IAI47_12515	0.64	-2.6
2,638,337	+		IAI47_12515	0.64	-0.8
2,638,338	-		IAI47_12515	0.64	-1.1
2,638,338	-		IAI47_12515	0.64	-0.8
2,638,338	-		IAI47_12515	0.64	+1.4
2,638,338	-		IAI47_12515	0.64	-1.0
2,638,338	-		IAI47_12515	0.64	+0.5
2,638,340	-		IAI47_12515	0.64	-0.8
2,638,431	+		IAI47_12515	0.77	+0.4
2,638,454	+		IAI47_12515	0.80	+0.1
2,638,454	+		IAI47_12515	0.80	+1.3
2,638,454	+		IAI47_12515	0.80	-1.9
2,638,455	-		IAI47_12515	0.80	+0.8
2,638,484	+		IAI47_12515	0.84	+0.8
2,638,484	+		IAI47_12515	0.84	+1.5
2,638,484	+		IAI47_12515	0.84	-0.3
2,638,484	+		IAI47_12515	0.84	-0.2
2,638,484	+		IAI47_12515	0.84	+0.5
2,638,484	+		IAI47_12515	0.84	+1.2
2,638,485	-		IAI47_12515	0.85	+1.6
2,638,564	+				+0.4
2,638,565	-				+0.3
2,638,601	-				-0.2
2,638,601	-				-0.8
2,638,614	+				-0.6
2,638,614	+				-0.1
2,638,614	+				+0.6
2,638,615	-				+0.0
2,638,615	-				+0.8
2,638,615	-				+2.7
2,638,626	+				+0.4
2,638,626	+				-2.3
2,638,626	+				+0.5
2,638,627	-				+1.4
2,638,627	-				+2.7
2,638,627	-				+0.6
2,638,627	-				-0.3
2,638,657	-		IAI47_12520	0.11	+1.2
2,638,657	-		IAI47_12520	0.11	-0.8
2,638,657	-		IAI47_12520	0.11	+0.2
2,638,657	-		IAI47_12520	0.11	+1.7
2,638,699	+		IAI47_12520	0.21	+0.4
2,638,699	+		IAI47_12520	0.21	+0.5
2,638,699	+				+0.4
2,638,699	+		IAI47_12520	0.21	+0.3
2,638,700	-		IAI47_12520	0.21	+0.2
2,638,700	-		IAI47_12520	0.21	+1.3
2,638,700	-		IAI47_12520	0.21	+0.4
2,638,700	-		IAI47_12520	0.21	+0.1
2,638,700	-		IAI47_12520	0.21	-1.0
2,638,710	+		IAI47_12520	0.24	-0.5
2,638,711	-		IAI47_12520	0.24	+1.5
2,638,711	-		IAI47_12520	0.24	+1.9
2,638,711	-		IAI47_12520	0.24	+1.0
2,638,711	-		IAI47_12520	0.24	+3.5
2,638,711	-		IAI47_12520	0.24	+1.5
2,638,791	+		IAI47_12520	0.44	+3.1
2,638,791	+		IAI47_12520	0.44	+0.7
2,638,839	+		IAI47_12520	0.57	+1.7
2,638,870	+		IAI47_12520	0.64	+1.3
2,638,871	-		IAI47_12520	0.65	+1.1
2,638,871	-		IAI47_12520	0.65	-1.2