Strain Fitness in Pantoea sp. MT58 around IAI47_11805

Experiment: Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
2,503,718	+		IAI47_11800	0.33	-0.8
2,503,718	+		IAI47_11800	0.33	-0.5
2,503,719	-		IAI47_11800	0.33	-1.4
2,503,719	-		IAI47_11800	0.33	-0.5
2,503,719	-		IAI47_11800	0.33	+1.2
2,503,719	-		IAI47_11800	0.33	-1.9
2,503,719	-		IAI47_11800	0.33	-0.9
2,503,721	-		IAI47_11800	0.33	+0.0
2,503,721	-		IAI47_11800	0.33	-1.4
2,503,721	-		IAI47_11800	0.33	-0.9
2,503,721	-		IAI47_11800	0.33	-1.2
2,503,826	+		IAI47_11800	0.42	+0.8
2,503,827	-		IAI47_11800	0.43	+1.6
2,503,828	+		IAI47_11800	0.43	+1.9
2,503,828	+		IAI47_11800	0.43	+0.0
2,503,828	+		IAI47_11800	0.43	-1.0
2,503,828	+		IAI47_11800	0.43	-1.1
2,503,828	+		IAI47_11800	0.43	+0.3
2,503,829	-		IAI47_11800	0.43	-0.0
2,503,829	-		IAI47_11800	0.43	+1.0
2,503,829	-		IAI47_11800	0.43	+1.6
2,503,829	-		IAI47_11800	0.43	-1.6
2,503,829	-		IAI47_11800	0.43	+2.6
2,503,829	-		IAI47_11800	0.43	+0.5
2,503,870	+		IAI47_11800	0.46	+2.0
2,503,870	+		IAI47_11800	0.46	-1.4
2,503,870	+		IAI47_11800	0.46	+1.2
2,503,870	+		IAI47_11800	0.46	+0.6
2,503,871	-		IAI47_11800	0.47	+0.7
2,503,871	-		IAI47_11800	0.47	+1.2
2,503,871	-		IAI47_11800	0.47	-0.4
2,503,917	-		IAI47_11800	0.51	+0.5
2,503,920	-		IAI47_11800	0.51	-1.3
2,503,934	+		IAI47_11800	0.52	-1.1
2,503,934	+		IAI47_11800	0.52	+1.2
2,503,996	+		IAI47_11800	0.58	+1.1
2,503,996	+		IAI47_11800	0.58	+0.9
2,503,996	+		IAI47_11800	0.58	-0.5
2,503,996	+		IAI47_11800	0.58	+1.4
2,503,996	+		IAI47_11800	0.58	-0.1
2,503,996	+		IAI47_11800	0.58	+1.0
2,503,996	+		IAI47_11800	0.58	+0.0
2,503,996	+		IAI47_11800	0.58	-0.2
2,503,997	-		IAI47_11800	0.58	-1.6
2,503,997	-		IAI47_11800	0.58	+0.9
2,503,997	-		IAI47_11800	0.58	+0.4
2,503,997	-		IAI47_11800	0.58	-1.5
2,503,997	-		IAI47_11800	0.58	-2.3
2,503,997	-		IAI47_11800	0.58	-1.1
2,503,997	-		IAI47_11800	0.58	+1.0
2,503,997	-		IAI47_11800	0.58	+0.4
2,503,997	-		IAI47_11800	0.58	+0.6
2,503,997	-		IAI47_11800	0.58	-1.0
2,504,035	+		IAI47_11800	0.61	-0.3
2,504,036	-		IAI47_11800	0.61	+0.8
2,504,036	-		IAI47_11800	0.61	-1.3
2,504,036	-		IAI47_11800	0.61	+0.7
2,504,070	-		IAI47_11800	0.64	-0.5
2,504,231	+		IAI47_11800	0.79	-0.4
2,504,246	+		IAI47_11800	0.80	+2.2
2,504,247	-		IAI47_11800	0.80	+1.4
2,504,247	-		IAI47_11800	0.80	-1.1
2,504,369	+				+2.6
2,504,370	-				-1.7
2,504,370	-				-0.5
2,504,370	-				-1.3
2,504,411	+				+0.4
2,504,411	+				+3.2
2,504,411	+				-1.1
2,504,411	+				-0.8
2,504,412	-				+0.6
2,504,412	-				-0.7
2,504,412	-				+0.6
2,504,450	+				+1.5
2,504,776	+		IAI47_11805	0.21	+0.7
2,504,776	+		IAI47_11805	0.21	-1.9
2,504,776	+		IAI47_11805	0.21	-0.3
2,504,776	+		IAI47_11805	0.21	-1.1
2,504,776	+		IAI47_11805	0.21	+1.4
2,504,813	-		IAI47_11805	0.23	+1.0
2,504,905	+		IAI47_11805	0.29	+2.5
2,504,906	-		IAI47_11805	0.29	-0.1
2,505,004	+		IAI47_11805	0.36	-1.1
2,505,005	-		IAI47_11805	0.36	-0.1
2,505,017	-		IAI47_11805	0.36	+1.5
2,505,017	-		IAI47_11805	0.36	-0.9
2,505,017	-		IAI47_11805	0.36	-0.7
2,505,042	+		IAI47_11805	0.38	+0.6
2,505,043	-		IAI47_11805	0.38	-0.7
2,505,043	-		IAI47_11805	0.38	+1.9
2,505,043	-		IAI47_11805	0.38	+0.5
2,505,043	-		IAI47_11805	0.38	-0.3
2,505,105	+		IAI47_11805	0.42	-0.6
2,505,105	+		IAI47_11805	0.42	-0.7
2,505,105	+		IAI47_11805	0.42	-0.6
2,505,105	+		IAI47_11805	0.42	-1.0
2,505,106	-		IAI47_11805	0.42	-0.6
2,505,106	-		IAI47_11805	0.42	+1.6
2,505,106	-		IAI47_11805	0.42	+1.0
2,505,137	-		IAI47_11805	0.44	+1.3
2,505,160	+		IAI47_11805	0.46	+0.8
2,505,160	+		IAI47_11805	0.46	+0.9
2,505,161	-		IAI47_11805	0.46	+1.6
2,505,161	-		IAI47_11805	0.46	-0.1
2,505,341	-		IAI47_11805	0.58	+1.8
2,505,341	-		IAI47_11805	0.58	-0.1
2,505,385	+		IAI47_11805	0.61	-0.6
2,505,385	+		IAI47_11805	0.61	+0.7
2,505,385	+		IAI47_11805	0.61	+2.9
2,505,386	-		IAI47_11805	0.61	-0.7
2,505,387	+		IAI47_11805	0.61	+1.6
2,505,388	-		IAI47_11805	0.61	-0.8
2,505,388	-		IAI47_11805	0.61	+0.2
2,505,397	+		IAI47_11805	0.62	+0.9
2,505,578	-		IAI47_11805	0.73	+0.2
2,505,578	-		IAI47_11805	0.73	-0.8
2,505,691	+		IAI47_11805	0.81	+2.9
2,505,965	-				+1.0
2,505,965	-				-0.1
2,506,142	+		IAI47_11810	0.27	+0.6
2,506,142	+		IAI47_11810	0.27	-2.6
2,506,142	+		IAI47_11810	0.27	-0.5
2,506,143	-		IAI47_11810	0.27	-1.7
2,506,158	+		IAI47_11810	0.30	+0.0
2,506,158	+		IAI47_11810	0.30	+1.3
2,506,240	-		IAI47_11810	0.43	-2.4
2,506,245	+		IAI47_11810	0.44	+0.3
2,506,278	+		IAI47_11810	0.50	-0.0
2,506,278	+		IAI47_11810	0.50	-0.2
2,506,279	-		IAI47_11810	0.50	-1.0
2,506,407	+		IAI47_11810	0.71	+0.4
2,506,407	+		IAI47_11810	0.71	-0.1
2,506,458	+		IAI47_11810	0.80	+0.3
2,506,458	+		IAI47_11810	0.80	+0.8
2,506,458	+		IAI47_11810	0.80	-1.5
2,506,459	-		IAI47_11810	0.80	+1.8
2,506,459	-		IAI47_11810	0.80	+0.1
2,506,460	+		IAI47_11810	0.80	-0.5
2,506,460	+		IAI47_11810	0.80	+0.5
2,506,460	+		IAI47_11810	0.80	-0.6
2,506,461	-		IAI47_11810	0.80	+2.2
2,506,461	-		IAI47_11810	0.80	+1.2
2,506,461	-		IAI47_11810	0.80	-1.6
2,506,461	-		IAI47_11810	0.80	+0.7
2,506,461	-		IAI47_11810	0.80	-0.7
2,506,461	-		IAI47_11810	0.80	+0.4
2,506,500	+		IAI47_11810	0.87	-0.8
2,506,558	+				+0.4
2,506,559	-				+2.2
2,506,567	+				-1.5
2,506,568	-				+1.1
2,506,568	-				+1.0
2,506,568	-				+0.4
2,506,569	+				+0.2
2,506,569	+				+2.7
2,506,569	+				-0.1
2,506,569	+				+1.0
2,506,569	+				+0.7
2,506,569	+				+0.9
2,506,570	-				+0.7
2,506,570	-				+0.3
2,506,582	+				+2.1
2,506,582	+				-0.5
2,506,583	-				-0.1
2,506,583	-				+0.3
2,506,687	+		IAI47_11815	0.11	-0.8
2,506,687	+		IAI47_11815	0.11	-0.1
2,506,688	-		IAI47_11815	0.11	+0.2
2,506,690	+		IAI47_11815	0.12	-1.6
2,506,690	+		IAI47_11815	0.12	-1.2
2,506,691	-		IAI47_11815	0.12	+0.6
2,506,691	-		IAI47_11815	0.12	+1.8
2,506,691	-		IAI47_11815	0.12	+0.7
2,506,754	+		IAI47_11815	0.18	-1.7
2,506,754	+		IAI47_11815	0.18	+1.4
2,506,786	+		IAI47_11815	0.22	+0.3