Strain Fitness in Pantoea sp. MT58 around IAI47_09810

Experiment: Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
2,073,655	+		IAI47_09805	0.30	+4.4
2,073,655	+		IAI47_09805	0.30	-0.4
2,073,655	+		IAI47_09805	0.30	-0.8
2,073,655	+		IAI47_09805	0.30	-1.0
2,073,655	+		IAI47_09805	0.30	-0.4
2,073,655	+		IAI47_09805	0.30	-2.5
2,073,655	+		IAI47_09805	0.30	-0.6
2,073,655	+		IAI47_09805	0.30	-1.3
2,073,655	+		IAI47_09805	0.30	-0.9
2,073,656	-		IAI47_09805	0.30	+0.4
2,073,656	-		IAI47_09805	0.30	+1.1
2,073,656	-		IAI47_09805	0.30	-0.3
2,073,656	-		IAI47_09805	0.30	-0.2
2,073,656	-		IAI47_09805	0.30	+0.2
2,073,656	-		IAI47_09805	0.30	+1.0
2,073,658	-		IAI47_09805	0.30	-0.8
2,073,658	-		IAI47_09805	0.30	+0.1
2,073,678	+		IAI47_09805	0.33	-0.1
2,073,679	-		IAI47_09805	0.33	+0.4
2,073,679	-		IAI47_09805	0.33	+1.0
2,073,702	+		IAI47_09805	0.36	-0.6
2,073,703	-		IAI47_09805	0.36	-1.0
2,073,740	+		IAI47_09805	0.41	+1.2
2,073,740	+		IAI47_09805	0.41	+0.1
2,073,740	+		IAI47_09805	0.41	-0.8
2,073,740	+		IAI47_09805	0.41	+1.0
2,073,740	+		IAI47_09805	0.41	+0.3
2,073,740	+		IAI47_09805	0.41	+0.7
2,073,740	+		IAI47_09805	0.41	+0.3
2,073,741	-		IAI47_09805	0.41	+1.0
2,073,741	-		IAI47_09805	0.41	+0.7
2,073,741	-		IAI47_09805	0.41	-0.0
2,073,741	-		IAI47_09805	0.41	+0.6
2,073,741	-		IAI47_09805	0.41	-1.3
2,073,741	-		IAI47_09805	0.41	+1.1
2,073,741	-		IAI47_09805	0.41	-2.1
2,073,758	+		IAI47_09805	0.44	-0.1
2,073,758	+		IAI47_09805	0.44	-1.6
2,073,759	-		IAI47_09805	0.44	+0.1
2,073,769	-		IAI47_09805	0.45	-2.1
2,073,814	+		IAI47_09805	0.51	+0.4
2,073,814	+		IAI47_09805	0.51	+1.8
2,073,814	+		IAI47_09805	0.51	+0.6
2,073,815	-		IAI47_09805	0.51	+0.8
2,073,815	-		IAI47_09805	0.51	-0.1
2,073,815	-		IAI47_09805	0.51	+2.2
2,073,815	-		IAI47_09805	0.51	-1.1
2,073,845	+		IAI47_09805	0.55	+0.6
2,073,845	+		IAI47_09805	0.55	+0.9
2,073,845	+		IAI47_09805	0.55	-0.0
2,073,846	-		IAI47_09805	0.55	+0.6
2,073,846	-		IAI47_09805	0.55	+1.1
2,073,846	-		IAI47_09805	0.55	+0.5
2,073,846	-		IAI47_09805	0.55	-0.1
2,073,949	+		IAI47_09805	0.69	+1.4
2,073,950	-		IAI47_09805	0.69	+3.0
2,073,957	+		IAI47_09805	0.70	+0.6
2,073,957	+		IAI47_09805	0.70	+0.6
2,073,958	-		IAI47_09805	0.70	+2.4
2,073,958	-		IAI47_09805	0.70	+0.1
2,073,958	-		IAI47_09805	0.70	+0.7
2,073,958	-		IAI47_09805	0.70	-2.1
2,074,032	+		IAI47_09805	0.80	+1.3
2,074,032	+		IAI47_09805	0.80	-1.3
2,074,033	-		IAI47_09805	0.80	+3.0
2,074,033	-		IAI47_09805	0.80	-0.2
2,074,034	+		IAI47_09805	0.80	+1.7
2,074,035	-		IAI47_09805	0.81	-0.0
2,074,035	-		IAI47_09805	0.81	-0.3
2,074,035	-		IAI47_09805	0.81	-1.6
2,074,069	+		IAI47_09805	0.85	+1.4
2,074,070	-		IAI47_09805	0.85	-0.1
2,074,173	+				-0.4
2,074,173	+				-0.7
2,074,173	+				-0.1
2,074,174	-				-0.9
2,074,192	+				-0.1
2,074,192	+				+0.6
2,074,193	-				+1.3
2,074,193	-				+1.1
2,074,223	+				+1.7
2,074,223	+				+1.4
2,074,223	+				+1.7
2,074,223	+				+0.6
2,074,223	+				+1.9
2,074,223	+				+0.3
2,074,223	+				-0.5
2,074,224	-				+0.6
2,074,224	-				-0.4
2,074,224	-				+0.2
2,074,224	-				+0.1
2,074,224	-				+0.9
2,074,224	-				+2.4
2,074,224	-				-1.0
2,074,269	+				-0.4
2,074,269	+				+0.3
2,074,269	+				-0.9
2,074,270	-				-0.2
2,074,270	-				-1.5
2,074,281	-				-1.0
2,074,321	+				+0.0
2,074,321	+				+1.9
2,074,321	+				-0.4
2,074,321	+				+0.6
2,074,322	-				+0.9
2,074,322	-				-1.1
2,074,322	-				+0.7
2,074,352	+				+0.3
2,074,353	-				-2.6
2,074,371	-				+2.4
2,074,438	+				+1.3
2,074,439	-				+0.1
2,074,439	-				+1.3
2,074,526	+				+1.2
2,074,529	-				+0.4
2,074,551	-				+0.3
2,074,551	-				-0.1
2,074,551	-				-0.9
2,074,551	-				-0.3
2,074,555	+				-0.7
2,074,555	+				+2.0
2,074,585	+				+0.1
2,074,586	-				-0.6
2,074,586	-				+1.4
2,074,586	-				+2.0
2,074,675	-				-1.3
2,074,714	+		IAI47_09810	0.10	-1.0
2,074,715	-		IAI47_09810	0.10	+0.7
2,074,795	+		IAI47_09810	0.16	-1.6
2,074,795	+		IAI47_09810	0.16	-0.7
2,074,795	+				-0.9
2,074,795	+		IAI47_09810	0.16	+3.0
2,074,817	+		IAI47_09810	0.18	-0.4
2,074,817	+		IAI47_09810	0.18	+0.4
2,074,817	+		IAI47_09810	0.18	+0.5
2,074,817	+		IAI47_09810	0.18	+0.6
2,074,817	+		IAI47_09810	0.18	+2.2
2,074,818	-		IAI47_09810	0.18	+0.6
2,074,818	-		IAI47_09810	0.18	+3.0
2,074,818	-		IAI47_09810	0.18	-1.8
2,074,818	-		IAI47_09810	0.18	-0.6
2,074,818	-		IAI47_09810	0.18	-0.7
2,074,818	-		IAI47_09810	0.18	-1.5
2,074,908	+		IAI47_09810	0.25	-0.6
2,074,908	+		IAI47_09810	0.25	+1.3
2,074,976	+		IAI47_09810	0.30	+0.3
2,074,977	-		IAI47_09810	0.30	+1.3
2,074,997	+		IAI47_09810	0.31	-2.1
2,074,998	-		IAI47_09810	0.31	-1.0
2,074,998	-		IAI47_09810	0.31	+1.4
2,074,998	-		IAI47_09810	0.31	-0.9
2,074,998	-		IAI47_09810	0.31	+0.9
2,075,106	-		IAI47_09810	0.40	+0.4
2,075,127	+		IAI47_09810	0.41	-1.9
2,075,128	-		IAI47_09810	0.41	+0.3
2,075,128	-		IAI47_09810	0.41	-0.1
2,075,162	+		IAI47_09810	0.44	+1.8
2,075,264	+		IAI47_09810	0.51	-1.9
2,075,276	+		IAI47_09810	0.52	+0.6
2,075,344	-		IAI47_09810	0.57	-0.6
2,075,355	+		IAI47_09810	0.58	-0.6
2,075,355	+		IAI47_09810	0.58	+0.5
2,075,356	-		IAI47_09810	0.58	-1.3
2,075,356	-		IAI47_09810	0.58	+0.4
2,075,356	-		IAI47_09810	0.58	-1.1
2,075,356	-		IAI47_09810	0.58	+2.2
2,075,356	-		IAI47_09810	0.58	-0.1
2,075,418	-		IAI47_09810	0.63	-1.9
2,075,418	-		IAI47_09810	0.63	+1.1
2,075,418	-		IAI47_09810	0.63	-0.6
2,075,453	+		IAI47_09810	0.66	-0.3
2,075,453	+		IAI47_09810	0.66	+0.1
2,075,454	-		IAI47_09810	0.66	-1.7
2,075,454	-		IAI47_09810	0.66	-1.0
2,075,501	+		IAI47_09810	0.69	-0.4
2,075,502	-		IAI47_09810	0.69	-1.7
2,075,507	+		IAI47_09810	0.70	-0.3
2,075,507	+		IAI47_09810	0.70	-0.4
2,075,573	+		IAI47_09810	0.75	-0.6
2,075,573	+		IAI47_09810	0.75	-1.1
2,075,573	+		IAI47_09810	0.75	-0.5
2,075,574	-		IAI47_09810	0.75	-2.3
2,075,574	-		IAI47_09810	0.75	-1.4
2,075,574	-		IAI47_09810	0.75	-0.8
2,075,574	-		IAI47_09810	0.75	-1.2
2,075,576	+		IAI47_09810	0.75	-1.1
2,075,577	-		IAI47_09810	0.75	+0.5
2,075,601	+		IAI47_09810	0.77	-0.6
2,075,601	+		IAI47_09810	0.77	-0.4
2,075,602	-		IAI47_09810	0.77	-0.3
2,075,602	-		IAI47_09810	0.77	-0.4
2,075,602	-		IAI47_09810	0.77	-1.6
2,075,602	-		IAI47_09810	0.77	+0.2
2,075,602	-		IAI47_09810	0.77	+0.4
2,075,608	+		IAI47_09810	0.77	-0.9
2,075,609	-		IAI47_09810	0.77	+0.9
2,075,609	-		IAI47_09810	0.77	+2.4
2,075,609	-		IAI47_09810	0.77	+0.8
2,075,609	-		IAI47_09810	0.77	-0.6
2,075,609	-		IAI47_09810	0.77	-1.1
2,075,652	+		IAI47_09810	0.81	+2.4
2,075,778	-				-1.3
2,075,778	-				+0.2
2,075,786	+				-2.6
2,075,795	+				-0.4
2,075,795	+				-0.7
2,075,795	+				+0.8
2,075,795	+				-1.1
2,075,795	+				-1.9
2,075,796	-				+1.0
2,075,796	-				+0.1
2,075,796	-				-0.3
2,075,816	-				-0.0
2,075,816	-				+1.1
2,075,818	+				+0.4
2,075,818	+				+1.3
2,075,818	+				-1.8
2,075,819	-				-0.7
2,075,819	-				+0.7
2,075,819	-				+1.0
2,075,860	+				-2.6
2,075,860	+				-0.5
2,075,860	+				+0.7
2,075,860	+				+0.4
2,075,860	+				+1.4
2,075,860	+				+1.4
2,075,861	-				+1.4
2,075,861	-				+2.7
2,075,922	+				+0.1
2,075,965	+				-1.0
2,075,965	+				+2.2
2,075,965	+				+2.0
2,075,978	+				+1.0
2,075,978	+				+0.1
2,075,978	+				-1.6
2,075,979	-				+0.7
2,075,979	-				-0.7
2,075,979	-				-0.9
2,075,979	-				-2.6
2,075,979	-				-1.2
2,076,008	-				-0.6
2,076,087	-		IAI47_09815	0.13	+1.4
2,076,087	-		IAI47_09815	0.13	+0.0
2,076,100	+		IAI47_09815	0.13	+1.6
2,076,100	+		IAI47_09815	0.13	-0.0
2,076,100	+		IAI47_09815	0.13	+0.1
2,076,100	+		IAI47_09815	0.13	+0.2
2,076,100	+		IAI47_09815	0.13	+1.3
2,076,100	+		IAI47_09815	0.13	-0.6
2,076,100	+		IAI47_09815	0.13	+0.9
2,076,101	-		IAI47_09815	0.14	+0.9
2,076,101	-		IAI47_09815	0.14	+0.1
2,076,101	-		IAI47_09815	0.14	+1.2
2,076,101	-		IAI47_09815	0.14	+0.1
2,076,101	-		IAI47_09815	0.14	-0.5
2,076,101	-		IAI47_09815	0.14	-0.9
2,076,101	-		IAI47_09815	0.14	-2.6
2,076,126	+		IAI47_09815	0.15	-0.1
2,076,126	+		IAI47_09815	0.15	+0.6
2,076,134	-		IAI47_09815	0.16	-0.8
2,076,151	-		IAI47_09815	0.17	+0.9
2,076,151	-		IAI47_09815	0.17	-0.7
2,076,151	-		IAI47_09815	0.17	+2.4
2,076,353	-		IAI47_09815	0.31	+2.7
2,076,465	+		IAI47_09815	0.39	+0.1
2,076,465	+		IAI47_09815	0.39	-0.9
2,076,465	+		IAI47_09815	0.39	+0.2
2,076,466	-		IAI47_09815	0.39	-0.6
2,076,466	-		IAI47_09815	0.39	-1.0
2,076,466	-		IAI47_09815	0.39	-0.9
2,076,525	-		IAI47_09815	0.43	+0.4
2,076,595	+		IAI47_09815	0.48	-0.2
2,076,595	+		IAI47_09815	0.48	-0.0
2,076,595	+		IAI47_09815	0.48	-1.5
2,076,596	-		IAI47_09815	0.48	+1.9
2,076,596	-		IAI47_09815	0.48	-0.3
2,076,596	-		IAI47_09815	0.48	+0.4
2,076,596	-		IAI47_09815	0.48	-1.3
2,076,640	+		IAI47_09815	0.51	-0.1
2,076,640	+		IAI47_09815	0.51	-2.1
2,076,641	-		IAI47_09815	0.51	+0.1
2,076,641	-		IAI47_09815	0.51	-0.3
2,076,668	+		IAI47_09815	0.53	-3.3
2,076,669	-		IAI47_09815	0.53	+0.7
2,076,669	-		IAI47_09815	0.53	-1.0
2,076,669	-		IAI47_09815	0.53	-0.4
2,076,799	+		IAI47_09815	0.62	-1.1
2,076,806	-		IAI47_09815	0.62	+0.3
2,076,806	-		IAI47_09815	0.62	+0.9
2,076,819	+		IAI47_09815	0.63	+0.4