Strain Fitness in Pantoea sp. MT58 around IAI47_09765

Experiment: Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
2,065,830	+		IAI47_09760	0.51	+0.5
2,065,830	+		IAI47_09760	0.51	+0.4
2,065,830	+		IAI47_09760	0.51	+0.4
2,065,830	+		IAI47_09760	0.51	+1.3
2,065,873	+		IAI47_09760	0.55	-1.7
2,065,873	+		IAI47_09760	0.55	-0.7
2,065,873	+		IAI47_09760	0.55	-2.0
2,065,874	-		IAI47_09760	0.55	-0.4
2,065,874	-		IAI47_09760	0.55	+0.1
2,066,056	+		IAI47_09760	0.68	-0.5
2,066,057	-		IAI47_09760	0.68	+0.9
2,066,057	-		IAI47_09760	0.68	+0.1
2,066,114	+		IAI47_09760	0.72	+0.3
2,066,118	+		IAI47_09760	0.72	-0.4
2,066,118	+		IAI47_09760	0.72	+0.9
2,066,118	+		IAI47_09760	0.72	-0.2
2,066,118	+		IAI47_09760	0.72	+0.9
2,066,119	-		IAI47_09760	0.72	+0.4
2,066,119	-		IAI47_09760	0.72	-2.4
2,066,130	+		IAI47_09760	0.73	+0.4
2,066,130	+		IAI47_09760	0.73	+0.0
2,066,130	+		IAI47_09760	0.73	-1.1
2,066,130	+		IAI47_09760	0.73	+0.1
2,066,130	+		IAI47_09760	0.73	+1.1
2,066,130	+		IAI47_09760	0.73	+0.6
2,066,130	+		IAI47_09760	0.73	+0.7
2,066,130	+		IAI47_09760	0.73	-2.5
2,066,131	-		IAI47_09760	0.73	-0.3
2,066,131	-		IAI47_09760	0.73	+0.2
2,066,131	-		IAI47_09760	0.73	+1.9
2,066,137	+		IAI47_09760	0.74	+0.4
2,066,137	+		IAI47_09760	0.74	-1.7
2,066,137	+		IAI47_09760	0.74	-1.3
2,066,137	+		IAI47_09760	0.74	+0.6
2,066,137	+		IAI47_09760	0.74	-1.7
2,066,138	-		IAI47_09760	0.74	-0.1
2,066,138	-		IAI47_09760	0.74	+1.4
2,066,219	-		IAI47_09760	0.80	+1.1
2,066,219	-		IAI47_09760	0.80	+0.8
2,066,219	-		IAI47_09760	0.80	+1.1
2,066,219	-		IAI47_09760	0.80	-2.4
2,066,219	-		IAI47_09760	0.80	+0.4
2,066,349	+		IAI47_09760	0.89	-0.4
2,066,374	+				-0.4
2,066,374	+				+1.7
2,066,375	-				+0.4
2,066,410	+				+0.8
2,066,411	-				+1.4
2,066,422	+				+0.1
2,066,423	-				+0.4
2,066,437	-				+0.1
2,066,495	+				-0.7
2,066,585	+				-0.7
2,066,585	+				-0.9
2,066,585	+				+1.3
2,066,585	+				+0.0
2,066,586	-				+1.0
2,066,586	-				-0.3
2,066,586	-				+2.9
2,066,586	-				+1.4
2,066,593	+				+0.5
2,066,671	+				+3.0
2,066,671	+				+0.1
2,066,671	+				-1.0
2,066,671	+				-0.7
2,066,672	-				-0.4
2,066,672	-				+1.0
2,066,692	-				-0.5
2,066,697	-				+1.2
2,066,705	+				+1.3
2,066,705	+				-0.3
2,066,705	+				-0.7
2,066,705	+				+1.8
2,066,705	+				+1.1
2,066,705	+				+1.4
2,066,706	-				-2.0
2,066,706	-				-2.1
2,066,706	-				-0.1
2,066,708	+				+3.3
2,066,708	+				-0.8
2,066,708	+				+0.3
2,066,708	+				+0.9
2,066,709	-				-0.2
2,066,709	-				+0.7
2,066,709	-				+1.7
2,066,720	+				+2.0
2,066,720	+				+0.6
2,066,730	+				-0.1
2,066,730	+				-0.6
2,066,730	+				+0.7
2,066,731	-				+0.3
2,066,731	-				+0.2
2,066,731	-				+0.1
2,066,731	-				+0.1
2,066,753	+				-1.1
2,066,754	-				-2.0
2,066,781	+				+1.4
2,066,781	+				+1.1
2,066,781	+				+0.6
2,066,781	+				+1.4
2,066,782	-				+0.2
2,066,782	-				+1.7
2,066,782	-				-0.7
2,066,782	-				+1.4
2,066,782	-				+0.7
2,066,783	+				-0.1
2,066,783	+				-0.7
2,066,783	+				-1.4
2,066,783	+				+0.5
2,066,783	+				+0.4
2,066,783	+				+1.0
2,066,783	+				-1.7
2,066,783	+				+1.9
2,066,784	-				-0.4
2,066,784	-				-0.7
2,066,784	-				-0.1
2,066,784	-				+1.1
2,066,784	-				+1.0
2,066,784	-				-2.0
2,066,784	-				+1.6
2,066,789	+				+1.0
2,066,789	+				-1.5
2,066,790	-				-0.3
2,066,792	+				-1.0
2,066,792	+				+0.6
2,066,793	-				+1.4
2,066,793	-				+0.9
2,066,793	-				+2.7
2,066,793	-				-1.1
2,066,800	+				+0.1
2,066,801	-				+1.0
2,066,801	-				+0.9
2,066,840	-				-2.4
2,066,852	-				+0.4
2,066,852	-				+1.4
2,066,852	-				+1.2
2,066,876	-				+0.1
2,066,876	-				+0.9
2,066,912	+				-1.3
2,066,912	+				+0.4
2,066,912	+				-1.4
2,066,912	+				-0.3
2,066,912	+				-0.1
2,066,912	+				-0.8
2,066,913	-		IAI47_09765	0.10	-0.4
2,066,913	-		IAI47_09765	0.10	+0.1
2,066,913	-		IAI47_09765	0.10	+0.9
2,066,923	+		IAI47_09765	0.11	-0.2
2,066,924	-		IAI47_09765	0.11	-1.1
2,067,015	-		IAI47_09765	0.19	-1.5
2,067,050	+		IAI47_09765	0.22	+0.4
2,067,050	+		IAI47_09765	0.22	+0.8
2,067,051	-		IAI47_09765	0.22	-0.7
2,067,051	-		IAI47_09765	0.22	-1.7
2,067,051	-		IAI47_09765	0.22	-0.4
2,067,051	-		IAI47_09765	0.22	-0.5
2,067,051	-		IAI47_09765	0.22	-1.1
2,067,072	-		IAI47_09765	0.24	+3.0
2,067,083	+		IAI47_09765	0.25	-0.7
2,067,084	-				+0.9
2,067,084	-		IAI47_09765	0.25	-1.1
2,067,183	+		IAI47_09765	0.34	+0.3
2,067,184	-		IAI47_09765	0.34	-0.0
2,067,195	-		IAI47_09765	0.35	+1.4
2,067,195	-		IAI47_09765	0.35	-0.8
2,067,195	-		IAI47_09765	0.35	+0.8
2,067,195	-		IAI47_09765	0.35	+0.4
2,067,285	-		IAI47_09765	0.43	+2.1
2,067,413	+		IAI47_09765	0.54	-0.0
2,067,492	-		IAI47_09765	0.61	+0.8
2,067,627	+		IAI47_09765	0.73	+0.4
2,067,627	+		IAI47_09765	0.73	+1.7
2,067,627	+				+0.3
2,067,627	+		IAI47_09765	0.73	-0.6
2,067,627	+		IAI47_09765	0.73	-0.1
2,067,628	-		IAI47_09765	0.73	+0.7
2,067,628	-		IAI47_09765	0.73	+1.4
2,067,628	-		IAI47_09765	0.73	+0.0
2,067,632	+		IAI47_09765	0.73	-1.4
2,067,632	+		IAI47_09765	0.73	-0.6
2,067,632	+		IAI47_09765	0.73	+0.8
2,067,632	+		IAI47_09765	0.73	-0.2
2,067,632	+		IAI47_09765	0.73	+2.4
2,067,632	+		IAI47_09765	0.73	-1.0
2,067,633	-		IAI47_09765	0.73	+0.2
2,067,633	-		IAI47_09765	0.73	-0.1
2,067,633	-		IAI47_09765	0.73	+1.7
2,067,633	-		IAI47_09765	0.73	+0.9
2,067,633	-		IAI47_09765	0.73	-0.6
2,067,633	-		IAI47_09765	0.73	+2.0
2,067,633	-		IAI47_09765	0.73	+1.1
2,067,669	+		IAI47_09765	0.77	-1.1
2,067,669	+		IAI47_09765	0.77	-1.5
2,067,670	-		IAI47_09765	0.77	-0.1
2,067,670	-		IAI47_09765	0.77	-1.3
2,067,670	-		IAI47_09765	0.77	-0.3
2,067,670	-		IAI47_09765	0.77	-0.4
2,067,685	+		IAI47_09765	0.78	-1.5
2,067,685	+		IAI47_09765	0.78	-0.1
2,067,685	+		IAI47_09765	0.78	-0.1
2,067,686	-		IAI47_09765	0.78	-0.6
2,067,686	-		IAI47_09765	0.78	-1.0
2,067,686	-		IAI47_09765	0.78	-0.3
2,067,686	-		IAI47_09765	0.78	-0.8
2,067,686	-		IAI47_09765	0.78	-0.3
2,067,686	-		IAI47_09765	0.78	+1.1
2,067,686	-		IAI47_09765	0.78	+0.4
2,067,722	+		IAI47_09765	0.81	+1.1
2,067,728	+		IAI47_09765	0.82	-0.7
2,067,729	-		IAI47_09765	0.82	+0.3
2,067,729	-		IAI47_09765	0.82	+1.0
2,067,729	-		IAI47_09765	0.82	+0.2
2,067,849	+				+0.4
2,067,850	-				+0.0
2,067,882	-				-2.4
2,067,882	-				+0.6
2,067,882	-				+2.1
2,067,902	+				-0.6
2,067,929	+				+0.2
2,067,929	+				+0.3
2,067,929	+				-0.5
2,067,929	+				+1.4
2,067,929	+				+1.4
2,067,930	-				+2.4
2,067,930	-				-1.1
2,068,036	+		IAI47_09770	0.16	+0.9
2,068,036	+		IAI47_09770	0.16	-1.3
2,068,036	+		IAI47_09770	0.16	-1.0
2,068,036	+		IAI47_09770	0.16	+1.4
2,068,036	+		IAI47_09770	0.16	-1.5
2,068,037	-		IAI47_09770	0.16	-0.7
2,068,037	-		IAI47_09770	0.16	+1.2
2,068,037	-		IAI47_09770	0.16	-0.7
2,068,037	-		IAI47_09770	0.16	-0.1
2,068,037	-		IAI47_09770	0.16	+0.6
2,068,042	+		IAI47_09770	0.17	+0.1
2,068,042	+		IAI47_09770	0.17	+0.7
2,068,043	-		IAI47_09770	0.17	+0.4
2,068,043	-		IAI47_09770	0.17	-1.8
2,068,141	+		IAI47_09770	0.32	+3.4
2,068,300	-		IAI47_09770	0.56	+0.9
2,068,300	-		IAI47_09770	0.56	-0.7
2,068,300	-		IAI47_09770	0.56	-0.6
2,068,390	+		IAI47_09770	0.70	-0.8
2,068,391	-		IAI47_09770	0.70	+0.2
2,068,556	-				+0.6
2,068,566	+				+1.2
2,068,566	+				+2.3
2,068,566	+				-0.8
2,068,566	+				+0.6
2,068,566	+				+3.0
2,068,567	-				-0.6
2,068,567	-				+1.2
2,068,567	-				+0.9
2,068,567	-				-2.0
2,068,567	-				+0.8
2,068,593	+				-0.4
2,068,593	+				+1.7
2,068,593	+				+1.1
2,068,594	-				-0.1
2,068,594	-				-1.7
2,068,594	-				-2.0
2,068,594	-				+1.0
2,068,594	-				+0.6
2,068,594	-				+0.7
2,068,715	-		IAI47_09775	0.13	+0.2
2,068,780	-		IAI47_09775	0.21	-1.6
2,068,798	+		IAI47_09775	0.23	+2.4
2,068,798	+		IAI47_09775	0.23	-0.3
2,068,799	-		IAI47_09775	0.23	+0.7
2,068,799	-		IAI47_09775	0.23	-0.1
2,068,832	-		IAI47_09775	0.26	+0.3
2,068,851	+		IAI47_09775	0.28	+0.6
2,068,851	+		IAI47_09775	0.28	-0.7
2,068,851	+		IAI47_09775	0.28	-0.9
2,068,852	-		IAI47_09775	0.29	-0.4
2,068,894	-		IAI47_09775	0.33	+0.3