Strain Fitness in Pantoea sp. MT58 around IAI47_09690

Experiment: Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
2,050,228	-		IAI47_09685	0.40	+0.1
2,050,284	+		IAI47_09685	0.45	+0.9
2,050,445	+		IAI47_09685	0.61	-2.0
2,050,446	-		IAI47_09685	0.61	-0.1
2,050,446	-		IAI47_09685	0.61	+0.4
2,050,463	+		IAI47_09685	0.63	+1.0
2,050,463	+		IAI47_09685	0.63	-0.3
2,050,463	+		IAI47_09685	0.63	+0.1
2,050,463	+		IAI47_09685	0.63	+0.4
2,050,464	-		IAI47_09685	0.63	+0.6
2,050,464	-		IAI47_09685	0.63	-1.8
2,050,549	+		IAI47_09685	0.71	+0.3
2,050,588	+		IAI47_09685	0.75	-1.5
2,050,622	+		IAI47_09685	0.78	+0.8
2,050,623	-		IAI47_09685	0.78	+0.3
2,050,623	-		IAI47_09685	0.78	+1.9
2,050,623	-		IAI47_09685	0.78	+1.0
2,050,641	-		IAI47_09685	0.80	-0.6
2,050,641	-		IAI47_09685	0.80	+0.2
2,050,641	-		IAI47_09685	0.80	+0.1
2,050,673	+		IAI47_09685	0.83	-0.7
2,050,673	+		IAI47_09685	0.83	-0.6
2,050,673	+		IAI47_09685	0.83	-0.4
2,050,673	+		IAI47_09685	0.83	+0.8
2,050,673	+		IAI47_09685	0.83	-1.4
2,050,673	+		IAI47_09685	0.83	+0.6
2,050,674	-		IAI47_09685	0.83	+1.8
2,050,674	-		IAI47_09685	0.83	+0.6
2,050,674	-		IAI47_09685	0.83	-1.0
2,050,674	-		IAI47_09685	0.83	+3.3
2,050,674	-		IAI47_09685	0.83	-0.8
2,050,674	-		IAI47_09685	0.83	-0.0
2,050,674	-		IAI47_09685	0.83	-0.5
2,050,674	-		IAI47_09685	0.83	-1.0
2,050,679	+		IAI47_09685	0.83	-1.7
2,050,679	+		IAI47_09685	0.83	+1.0
2,050,679	+		IAI47_09685	0.83	+0.1
2,050,679	+		IAI47_09685	0.83	-0.1
2,050,679	+		IAI47_09685	0.83	+0.3
2,050,679	+		IAI47_09685	0.83	+0.4
2,050,679	+		IAI47_09685	0.83	-1.4
2,050,679	+		IAI47_09685	0.83	+1.0
2,050,679	+		IAI47_09685	0.83	+0.8
2,050,679	+		IAI47_09685	0.83	+1.1
2,050,679	+		IAI47_09685	0.83	-0.6
2,050,679	+		IAI47_09685	0.83	-0.1
2,050,680	-		IAI47_09685	0.84	-0.4
2,050,680	-		IAI47_09685	0.84	-1.4
2,050,680	-		IAI47_09685	0.84	-0.1
2,050,680	-		IAI47_09685	0.84	-0.6
2,050,680	-		IAI47_09685	0.84	-0.1
2,050,680	-		IAI47_09685	0.84	+1.3
2,050,680	-		IAI47_09685	0.84	+1.2
2,050,709	+		IAI47_09685	0.86	-0.1
2,050,709	+		IAI47_09685	0.86	+0.7
2,050,709	+		IAI47_09685	0.86	+1.2
2,050,709	+		IAI47_09685	0.86	-0.1
2,050,709	+		IAI47_09685	0.86	-0.8
2,050,709	+		IAI47_09685	0.86	+0.4
2,050,709	+		IAI47_09685	0.86	+2.0
2,050,709	+		IAI47_09685	0.86	+0.4
2,050,710	-		IAI47_09685	0.86	+2.4
2,050,710	-		IAI47_09685	0.86	+1.1
2,050,710	-		IAI47_09685	0.86	-0.0
2,050,710	-		IAI47_09685	0.86	-1.5
2,050,710	-		IAI47_09685	0.86	-1.7
2,050,710	-		IAI47_09685	0.86	+0.5
2,050,710	-		IAI47_09685	0.86	+0.5
2,050,716	+		IAI47_09685	0.87	+0.3
2,050,716	+		IAI47_09685	0.87	+0.9
2,050,716	+		IAI47_09685	0.87	+0.1
2,050,716	+		IAI47_09685	0.87	+0.3
2,050,716	+		IAI47_09685	0.87	+1.0
2,050,716	+		IAI47_09685	0.87	+0.3
2,050,716	+		IAI47_09685	0.87	-0.3
2,050,716	+		IAI47_09685	0.87	-0.1
2,050,716	+		IAI47_09685	0.87	+0.3
2,050,716	+		IAI47_09685	0.87	+1.5
2,050,717	-		IAI47_09685	0.87	-1.4
2,050,717	-		IAI47_09685	0.87	+2.1
2,050,717	-		IAI47_09685	0.87	-1.5
2,050,717	-		IAI47_09685	0.87	-0.1
2,050,717	-		IAI47_09685	0.87	+0.9
2,050,717	-		IAI47_09685	0.87	+0.1
2,050,717	-		IAI47_09685	0.87	-0.0
2,050,782	+				+0.6
2,050,782	+				+0.6
2,050,782	+				+1.1
2,050,783	-				+2.5
2,050,807	+				-0.7
2,050,808	-				+0.8
2,050,822	+				-1.9
2,050,823	-				+0.9
2,050,824	+				+0.6
2,050,825	-				+0.9
2,050,825	-				-1.8
2,050,869	+				-0.3
2,050,869	+				+0.7
2,050,869	+				-1.6
2,050,870	-				-0.5
2,050,870	-				+1.9
2,050,874	+				-0.8
2,050,874	+				-0.4
2,050,874	+				+0.1
2,050,875	-				-0.3
2,050,875	-				-0.9
2,050,884	+				-0.6
2,050,884	+				-0.9
2,050,885	-				+0.3
2,050,885	-				-1.4
2,050,887	+				-0.1
2,050,888	-				-1.7
2,050,888	-				-0.1
2,051,054	+				+0.4
2,051,054	+				-1.6
2,051,085	+				-0.1
2,051,128	-				+1.8
2,051,145	+				-0.1
2,051,145	+				+0.9
2,051,145	+				+1.2
2,051,145	+				-0.6
2,051,145	+				-0.1
2,051,146	-				+0.5
2,051,200	+				+0.1
2,051,263	-		IAI47_09690	0.12	+2.7
2,051,263	-		IAI47_09690	0.12	+1.5
2,051,266	+		IAI47_09690	0.12	+0.1
2,051,266	+		IAI47_09690	0.12	+1.4
2,051,266	+		IAI47_09690	0.12	-0.5
2,051,266	+		IAI47_09690	0.12	+0.7
2,051,267	-		IAI47_09690	0.12	+0.5
2,051,267	-		IAI47_09690	0.12	-0.1
2,051,267	-		IAI47_09690	0.12	+0.1
2,051,267	-		IAI47_09690	0.12	-1.9
2,051,267	-		IAI47_09690	0.12	+1.8
2,051,267	-		IAI47_09690	0.12	-1.2
2,051,303	-		IAI47_09690	0.17	+3.4
2,051,331	+		IAI47_09690	0.20	+0.9
2,051,331	+		IAI47_09690	0.20	-0.8
2,051,364	+				+1.6
2,051,365	-		IAI47_09690	0.24	-0.7
2,051,365	-		IAI47_09690	0.24	+1.0
2,051,481	-		IAI47_09690	0.37	-2.1
2,051,576	+		IAI47_09690	0.48	+0.1
2,051,766	+		IAI47_09690	0.70	+0.8
2,051,767	-		IAI47_09690	0.70	+1.0
2,051,776	+		IAI47_09690	0.71	-0.2
2,051,805	+		IAI47_09690	0.75	+0.4
2,051,805	+		IAI47_09690	0.75	+0.4
2,051,805	+		IAI47_09690	0.75	+0.4
2,051,805	+		IAI47_09690	0.75	-0.9
2,051,806	-		IAI47_09690	0.75	-1.0
2,051,852	+		IAI47_09690	0.80	+0.6
2,051,852	+		IAI47_09690	0.80	-0.7
2,051,853	-		IAI47_09690	0.80	+0.7
2,051,853	-		IAI47_09690	0.80	+2.4
2,051,853	-		IAI47_09690	0.80	+1.6
2,051,854	+		IAI47_09690	0.80	-2.3
2,051,854	+		IAI47_09690	0.80	+0.9
2,051,854	+		IAI47_09690	0.80	+1.4
2,051,854	+		IAI47_09690	0.80	+0.6
2,051,855	-		IAI47_09690	0.80	+0.0
2,051,855	-		IAI47_09690	0.80	+1.8
2,051,855	-		IAI47_09690	0.80	+1.3
2,051,855	-		IAI47_09690	0.80	+1.2
2,051,855	-		IAI47_09690	0.80	+0.2
2,051,878	+		IAI47_09690	0.83	+0.9
2,051,879	-		IAI47_09690	0.83	-0.7
2,051,922	+		IAI47_09690	0.88	+1.2
2,051,984	-				-0.4
2,051,984	-				+0.6
2,051,998	-				+1.9
2,052,014	+				-0.5
2,052,014	+				-0.9
2,052,014	+				+1.0
2,052,015	-				-0.4
2,052,015	-				+1.7
2,052,038	+				+0.4
2,052,039	-				+0.2
2,052,039	-				-0.1
2,052,039	-				+0.8
2,052,138	+		IAI47_09695	0.12	+0.6
2,052,144	+		IAI47_09695	0.13	+0.7
2,052,145	-		IAI47_09695	0.13	+0.6
2,052,145	-		IAI47_09695	0.13	+0.1
2,052,145	-		IAI47_09695	0.13	+2.4
2,052,153	+		IAI47_09695	0.14	+1.4
2,052,153	+		IAI47_09695	0.14	+1.1
2,052,154	-		IAI47_09695	0.14	+0.4
2,052,154	-		IAI47_09695	0.14	-2.4
2,052,184	+		IAI47_09695	0.18	-1.6
2,052,184	+		IAI47_09695	0.18	+0.3
2,052,184	+		IAI47_09695	0.18	+3.0
2,052,185	-		IAI47_09695	0.18	+0.7
2,052,187	+		IAI47_09695	0.18	+1.2
2,052,201	+		IAI47_09695	0.20	+0.1
2,052,201	+		IAI47_09695	0.20	-0.3
2,052,201	+		IAI47_09695	0.20	-0.9
2,052,206	+		IAI47_09695	0.21	+0.4
2,052,207	-		IAI47_09695	0.21	-0.6
2,052,256	-		IAI47_09695	0.27	-0.6
2,052,256	-		IAI47_09695	0.27	+0.3
2,052,311	+		IAI47_09695	0.33	-1.1
2,052,311	+		IAI47_09695	0.33	+2.4
2,052,311	+		IAI47_09695	0.33	-1.0
2,052,312	-		IAI47_09695	0.33	+0.9
2,052,312	-		IAI47_09695	0.33	+1.2
2,052,312	-		IAI47_09695	0.33	-1.2
2,052,312	-		IAI47_09695	0.33	+0.2
2,052,312	-		IAI47_09695	0.33	+0.9
2,052,410	-		IAI47_09695	0.45	-2.3
2,052,410	-		IAI47_09695	0.45	+0.3
2,052,530	+		IAI47_09695	0.60	+0.6
2,052,531	-		IAI47_09695	0.60	+0.8
2,052,557	-		IAI47_09695	0.63	-3.2
2,052,557	-		IAI47_09695	0.63	-1.7
2,052,565	+		IAI47_09695	0.64	+0.4
2,052,566	-		IAI47_09695	0.64	+0.1
2,052,566	-		IAI47_09695	0.64	-2.3
2,052,628	-		IAI47_09695	0.72	+0.2
2,052,628	-		IAI47_09695	0.72	+3.7
2,052,628	-		IAI47_09695	0.72	-0.7
2,052,641	+		IAI47_09695	0.73	+0.0
2,052,641	+		IAI47_09695	0.73	-0.0
2,052,641	+		IAI47_09695	0.73	+1.1
2,052,641	+		IAI47_09695	0.73	+1.9
2,052,642	-		IAI47_09695	0.74	+0.4
2,052,642	-		IAI47_09695	0.74	-0.9
2,052,642	-		IAI47_09695	0.74	-0.7
2,052,642	-		IAI47_09695	0.74	-2.0
2,052,712	+		IAI47_09695	0.82	-0.6
2,052,712	+		IAI47_09695	0.82	+0.6
2,052,712	+		IAI47_09695	0.82	+0.6
2,052,713	-		IAI47_09695	0.82	+2.4
2,052,713	-		IAI47_09695	0.82	+0.6
2,052,713	-		IAI47_09695	0.82	-0.7
2,052,713	-		IAI47_09695	0.82	-1.1
2,052,802	+				-0.3
2,052,802	+				-1.1
2,052,802	+				-0.9
2,052,802	+				+0.8
2,052,802	+				-0.4
2,052,802	+				-1.1
2,052,802	+				-2.0
2,052,802	+				+0.1
2,052,802	+				+0.7
2,052,802	+				+0.0
2,052,802	+				-0.0
2,052,802	+				+0.4
2,052,802	+				+0.4
2,052,803	-				+0.3
2,052,803	-				+1.2
2,052,803	-				-0.6
2,052,803	-				-0.8
2,052,803	-				+0.4
2,052,803	-				+0.3
2,052,803	-				+0.9
2,052,803	-				+1.1
2,052,803	-				+0.6
2,052,803	-				+0.2
2,052,803	-				-0.6
2,052,803	-				-0.6
2,052,803	-				-0.4
2,052,803	-				+1.6
2,052,803	-				+0.9
2,052,803	-				+2.0
2,052,803	-				+0.3
2,052,803	-				+0.8
2,052,808	+				-0.5
2,052,809	-				-0.5
2,052,815	+				+2.0
2,052,816	-				-1.3
2,052,872	+				-0.1
2,052,878	-				+0.2
2,052,897	+				+0.3
2,052,897	+				+0.5
2,052,897	+				-0.4
2,052,917	+				-1.4
2,052,917	+				-1.7
2,052,917	+				-0.8
2,052,918	-				-0.8
2,052,918	-				-0.9
2,052,918	-				-0.3
2,052,918	-				-0.4
2,052,918	-				-0.3
2,052,968	+				-1.7
2,052,982	-				-0.6