Strain Fitness in Pantoea sp. MT58 around IAI47_09660

Experiment: Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
2,044,780	+		IAI47_09655	0.32	+0.4
2,044,780	+		IAI47_09655	0.32	+0.9
2,044,781	-		IAI47_09655	0.32	-0.3
2,044,864	-		IAI47_09655	0.38	-1.3
2,044,879	+		IAI47_09655	0.39	+2.4
2,044,985	+		IAI47_09655	0.46	-1.0
2,045,073	+		IAI47_09655	0.53	-0.2
2,045,074	-		IAI47_09655	0.53	-0.1
2,045,074	-		IAI47_09655	0.53	+0.9
2,045,074	-		IAI47_09655	0.53	-0.3
2,045,074	-		IAI47_09655	0.53	+0.7
2,045,137	+		IAI47_09655	0.57	-0.6
2,045,137	+		IAI47_09655	0.57	-1.3
2,045,220	-		IAI47_09655	0.63	-0.2
2,045,220	-		IAI47_09655	0.63	-0.1
2,045,485	+		IAI47_09655	0.82	+0.4
2,045,485	+		IAI47_09655	0.82	+0.5
2,045,486	-		IAI47_09655	0.82	-0.2
2,045,486	-		IAI47_09655	0.82	-0.3
2,045,495	-		IAI47_09655	0.82	-0.8
2,045,848	+				+0.7
2,045,848	+				-0.1
2,045,848	+				-0.9
2,045,848	+				-2.7
2,045,848	+				+0.6
2,045,849	-				+0.4
2,045,866	+				-0.0
2,045,866	+				-1.1
2,045,866	+				+1.9
2,045,867	-				+0.2
2,045,867	-				+0.5
2,045,983	+		IAI47_09660	0.19	+0.4
2,045,983	+		IAI47_09660	0.19	+0.1
2,045,983	+		IAI47_09660	0.19	+0.2
2,045,983	+		IAI47_09660	0.19	+0.1
2,045,983	+		IAI47_09660	0.19	+0.4
2,045,984	-		IAI47_09660	0.19	-1.5
2,045,984	-		IAI47_09660	0.19	+1.1
2,045,984	-		IAI47_09660	0.19	-0.4
2,046,057	+		IAI47_09660	0.25	+0.9
2,046,057	+		IAI47_09660	0.25	+0.5
2,046,058	-		IAI47_09660	0.25	-1.5
2,046,058	-		IAI47_09660	0.25	-1.5
2,046,063	+		IAI47_09660	0.25	-1.0
2,046,063	+		IAI47_09660	0.25	+1.6
2,046,064	-		IAI47_09660	0.25	-0.9
2,046,073	+		IAI47_09660	0.26	+2.3
2,046,101	+		IAI47_09660	0.28	+0.9
2,046,101	+		IAI47_09660	0.28	-0.5
2,046,195	+		IAI47_09660	0.36	+1.7
2,046,195	+		IAI47_09660	0.36	+1.7
2,046,196	-		IAI47_09660	0.36	+0.6
2,046,196	-		IAI47_09660	0.36	-0.9
2,046,357	+		IAI47_09660	0.48	+1.4
2,046,361	+		IAI47_09660	0.49	-0.0
2,046,361	+		IAI47_09660	0.49	-2.3
2,046,361	+		IAI47_09660	0.49	+1.4
2,046,361	+		IAI47_09660	0.49	-0.4
2,046,361	+		IAI47_09660	0.49	-0.3
2,046,361	+		IAI47_09660	0.49	+1.0
2,046,361	+		IAI47_09660	0.49	+1.3
2,046,361	+		IAI47_09660	0.49	+0.6
2,046,362	-		IAI47_09660	0.49	-0.3
2,046,362	-		IAI47_09660	0.49	-1.1
2,046,362	-		IAI47_09660	0.49	+2.7
2,046,362	-		IAI47_09660	0.49	+0.6
2,046,362	-		IAI47_09660	0.49	+0.9
2,046,396	+		IAI47_09660	0.51	+1.1
2,046,396	+		IAI47_09660	0.51	+2.0
2,046,397	-		IAI47_09660	0.52	+1.3
2,046,397	-		IAI47_09660	0.52	+0.3
2,046,470	+		IAI47_09660	0.57	-0.1
2,046,502	+		IAI47_09660	0.60	-0.4
2,046,502	+		IAI47_09660	0.60	+0.9
2,046,502	+		IAI47_09660	0.60	+0.3
2,046,502	+		IAI47_09660	0.60	+1.4
2,046,502	+		IAI47_09660	0.60	+0.9
2,046,503	-		IAI47_09660	0.60	+0.2
2,046,503	-		IAI47_09660	0.60	-0.9
2,046,514	+		IAI47_09660	0.61	-0.1
2,046,514	+		IAI47_09660	0.61	+0.2
2,046,514	+		IAI47_09660	0.61	-2.0
2,046,514	+		IAI47_09660	0.61	-0.3
2,046,514	+		IAI47_09660	0.61	-0.4
2,046,514	+		IAI47_09660	0.61	-1.6
2,046,514	+		IAI47_09660	0.61	-0.7
2,046,514	+		IAI47_09660	0.61	-0.0
2,046,515	-		IAI47_09660	0.61	-0.7
2,046,515	-		IAI47_09660	0.61	+1.7
2,046,515	-		IAI47_09660	0.61	-0.2
2,046,515	-		IAI47_09660	0.61	-1.1
2,046,515	-		IAI47_09660	0.61	+1.9
2,046,515	-		IAI47_09660	0.61	+1.6
2,046,515	-		IAI47_09660	0.61	+1.1
2,046,515	-		IAI47_09660	0.61	-0.6
2,046,515	-		IAI47_09660	0.61	-0.5
2,046,515	-		IAI47_09660	0.61	+2.8
2,046,515	-		IAI47_09660	0.61	+0.2
2,046,515	-		IAI47_09660	0.61	+2.4
2,046,515	-		IAI47_09660	0.61	-0.1
2,046,515	-		IAI47_09660	0.61	+0.6
2,046,515	-		IAI47_09660	0.61	+1.4
2,046,518	+		IAI47_09660	0.61	-0.6
2,046,519	-		IAI47_09660	0.61	+1.0
2,046,519	-		IAI47_09660	0.61	-0.9
2,046,526	+		IAI47_09660	0.62	-2.4
2,046,526	+		IAI47_09660	0.62	-2.6
2,046,527	-		IAI47_09660	0.62	-0.7
2,046,674	+		IAI47_09660	0.73	+0.6
2,046,674	+		IAI47_09660	0.73	+0.9
2,046,674	+		IAI47_09660	0.73	-0.6
2,046,675	-		IAI47_09660	0.73	+0.9
2,046,684	+		IAI47_09660	0.74	+0.1
2,046,691	+		IAI47_09660	0.75	-1.1
2,046,691	+		IAI47_09660	0.75	+0.6
2,046,691	+		IAI47_09660	0.75	-1.6
2,046,691	+		IAI47_09660	0.75	-1.1
2,046,691	+		IAI47_09660	0.75	-1.4
2,046,691	+		IAI47_09660	0.75	+0.1
2,046,692	-		IAI47_09660	0.75	+0.6
2,046,692	-		IAI47_09660	0.75	+0.4
2,046,692	-		IAI47_09660	0.75	+0.2
2,046,692	-		IAI47_09660	0.75	-1.5
2,046,703	-		IAI47_09660	0.76	+0.9
2,046,732	+		IAI47_09660	0.78	+0.2
2,046,732	+		IAI47_09660	0.78	-0.3
2,046,732	+		IAI47_09660	0.78	+0.6
2,046,732	+		IAI47_09660	0.78	+0.1
2,046,732	+		IAI47_09660	0.78	+1.1
2,046,732	+		IAI47_09660	0.78	-0.4
2,046,732	+		IAI47_09660	0.78	-0.1
2,046,732	+		IAI47_09660	0.78	-1.6
2,046,733	-		IAI47_09660	0.78	+1.4
2,046,733	-		IAI47_09660	0.78	-2.3
2,046,733	-		IAI47_09660	0.78	+0.4
2,046,733	-		IAI47_09660	0.78	+0.1
2,046,733	-		IAI47_09660	0.78	-0.9
2,046,738	-		IAI47_09660	0.78	+0.1
2,046,738	-		IAI47_09660	0.78	+1.0
2,046,778	+		IAI47_09660	0.82	+0.5
2,046,853	+		IAI47_09660	0.87	+1.4
2,046,853	+		IAI47_09660	0.87	+0.2
2,046,853	+		IAI47_09660	0.87	-1.3
2,046,853	+		IAI47_09660	0.87	+0.7
2,046,854	-		IAI47_09660	0.88	+0.9
2,046,854	-		IAI47_09660	0.88	+0.4
2,046,872	+		IAI47_09660	0.89	-1.1
2,046,872	+		IAI47_09660	0.89	-2.4
2,046,872	+		IAI47_09660	0.89	+2.2
2,046,872	+		IAI47_09660	0.89	+0.0
2,046,872	+		IAI47_09660	0.89	+0.9
2,046,872	+		IAI47_09660	0.89	+2.9
2,046,873	-		IAI47_09660	0.89	+0.4
2,046,943	+				+0.6
2,046,943	+				+0.9
2,046,944	-				+0.1
2,046,944	-				-1.9
2,046,944	-				-1.7
2,046,946	+				-0.5
2,046,946	+				-0.8
2,046,947	-				+1.9
2,046,947	-				+3.4
2,046,947	-				-0.7
2,046,947	-				-1.0
2,046,968	+				-2.2
2,046,968	+				+1.2
2,046,969	-				+1.4
2,046,969	-				-2.0
2,046,969	-				+1.8
2,046,969	-				+0.4
2,046,969	-				+1.3
2,047,009	+				-1.0
2,047,009	+				+1.0
2,047,009	+				-0.4
2,047,009	+				+0.1
2,047,010	-				-2.0
2,047,026	+				-0.1
2,047,026	+				-0.5
2,047,027	-				+0.2
2,047,104	+				-0.4
2,047,104	+				+0.1
2,047,104	+				+1.3
2,047,104	+				-0.3
2,047,105	-				-0.9
2,047,125	+				+0.4
2,047,126	-				+0.5
2,047,126	-				+0.1
2,047,126	-				-0.7
2,047,219	+				-2.0
2,047,220	-				+0.8
2,047,224	+				-1.1
2,047,224	+				-1.3
2,047,224	+				-2.0
2,047,224	+				+2.4
2,047,224	+				-0.1
2,047,224	+				-1.1
2,047,225	-				+0.4
2,047,225	-				-0.8
2,047,225	-				+0.2
2,047,225	-				-1.1
2,047,225	-				+0.2
2,047,225	-				+1.7
2,047,225	-				+0.4
2,047,268	-		IAI47_09665	0.13	+0.4
2,047,268	-		IAI47_09665	0.13	-0.5
2,047,273	+		IAI47_09665	0.13	+1.5
2,047,273	+		IAI47_09665	0.13	-0.7
2,047,274	-		IAI47_09665	0.13	-0.1
2,047,285	-		IAI47_09665	0.14	+0.9
2,047,285	-		IAI47_09665	0.14	+1.4
2,047,285	-		IAI47_09665	0.14	+1.1
2,047,306	-		IAI47_09665	0.15	+0.8
2,047,306	-		IAI47_09665	0.15	+3.3
2,047,394	-		IAI47_09665	0.21	-0.3
2,047,420	+		IAI47_09665	0.23	-0.4
2,047,421	-		IAI47_09665	0.23	-0.4
2,047,508	+		IAI47_09665	0.29	+0.9
2,047,508	+		IAI47_09665	0.29	+1.4
2,047,543	+		IAI47_09665	0.32	-0.1
2,047,628	-		IAI47_09665	0.38	+0.5
2,047,628	-		IAI47_09665	0.38	+0.0
2,047,638	+		IAI47_09665	0.38	+0.6
2,047,638	+		IAI47_09665	0.38	+1.3
2,047,639	-		IAI47_09665	0.38	-0.1
2,047,639	-		IAI47_09665	0.38	+1.0
2,047,639	-		IAI47_09665	0.38	-0.4
2,047,656	+		IAI47_09665	0.40	-1.0
2,047,656	+		IAI47_09665	0.40	+0.6
2,047,656	+		IAI47_09665	0.40	-0.6
2,047,656	+		IAI47_09665	0.40	-0.3
2,047,656	+		IAI47_09665	0.40	+0.2
2,047,656	+		IAI47_09665	0.40	-0.7
2,047,656	+		IAI47_09665	0.40	+0.6
2,047,657	-		IAI47_09665	0.40	+1.1
2,047,657	-		IAI47_09665	0.40	-0.0
2,047,657	-		IAI47_09665	0.40	+1.4
2,047,657	-		IAI47_09665	0.40	+1.7
2,047,657	-		IAI47_09665	0.40	+0.7
2,047,675	+		IAI47_09665	0.41	+0.0
2,047,676	-		IAI47_09665	0.41	+2.0
2,047,676	-		IAI47_09665	0.41	+0.9
2,047,756	+		IAI47_09665	0.46	+0.6
2,047,828	+		IAI47_09665	0.51	-0.6
2,047,828	+		IAI47_09665	0.51	+0.1
2,047,829	-		IAI47_09665	0.52	+2.0
2,047,914	+		IAI47_09665	0.57	+1.5
2,047,914	+		IAI47_09665	0.57	-1.7
2,047,914	+		IAI47_09665	0.57	-0.1
2,047,914	+		IAI47_09665	0.57	-1.3
2,047,914	+		IAI47_09665	0.57	-1.6
2,047,915	-		IAI47_09665	0.58	+2.4
2,047,924	+		IAI47_09665	0.58	-0.9
2,047,924	+		IAI47_09665	0.58	-0.3
2,047,924	+		IAI47_09665	0.58	+0.9
2,047,925	-		IAI47_09665	0.58	-2.0
2,047,925	-		IAI47_09665	0.58	+0.5
2,047,957	+		IAI47_09665	0.60	+2.4
2,047,957	+		IAI47_09665	0.60	+1.0
2,047,957	+		IAI47_09665	0.60	+2.4
2,047,957	+		IAI47_09665	0.60	+1.1
2,047,958	-		IAI47_09665	0.61	+0.4
2,047,958	-		IAI47_09665	0.61	+2.4
2,048,006	-		IAI47_09665	0.64	+1.4
2,048,006	-		IAI47_09665	0.64	+1.7