Strain Fitness in Pantoea sp. MT58 around IAI47_14585

Experiment: Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
3,074,326	+		IAI47_14580	0.30	+0.2
3,074,326	+		IAI47_14580	0.30	+0.6
3,074,327	-		IAI47_14580	0.30	+1.6
3,074,327	-		IAI47_14580	0.30	+0.7
3,074,343	-		IAI47_14580	0.31	+0.0
3,074,363	+		IAI47_14580	0.33	-1.6
3,074,397	-		IAI47_14580	0.36	-0.1
3,074,403	+		IAI47_14580	0.36	+2.2
3,074,404	-		IAI47_14580	0.36	+1.5
3,074,533	+		IAI47_14580	0.46	+0.1
3,074,533	+		IAI47_14580	0.46	-0.6
3,074,533	+		IAI47_14580	0.46	-0.0
3,074,533	+		IAI47_14580	0.46	-0.5
3,074,533	+		IAI47_14580	0.46	-1.3
3,074,534	-		IAI47_14580	0.46	+0.4
3,074,579	+		IAI47_14580	0.50	-0.1
3,074,580	-		IAI47_14580	0.50	+0.6
3,074,580	-		IAI47_14580	0.50	-1.7
3,074,580	-		IAI47_14580	0.50	-1.4
3,074,580	-		IAI47_14580	0.50	+0.9
3,074,592	-		IAI47_14580	0.51	+0.3
3,074,613	+		IAI47_14580	0.52	+1.2
3,074,613	+		IAI47_14580	0.52	+0.9
3,074,618	+		IAI47_14580	0.53	+0.5
3,074,620	+		IAI47_14580	0.53	+1.6
3,074,620	+		IAI47_14580	0.53	-0.7
3,074,620	+		IAI47_14580	0.53	-2.2
3,074,620	+		IAI47_14580	0.53	+1.2
3,074,620	+		IAI47_14580	0.53	+0.4
3,074,621	-		IAI47_14580	0.53	+0.9
3,074,621	-		IAI47_14580	0.53	-2.6
3,074,640	+		IAI47_14580	0.55	-1.4
3,074,640	+		IAI47_14580	0.55	-0.4
3,074,640	+		IAI47_14580	0.55	+1.0
3,074,641	-		IAI47_14580	0.55	+0.6
3,074,641	-		IAI47_14580	0.55	-1.5
3,074,652	-		IAI47_14580	0.55	-1.4
3,074,654	+		IAI47_14580	0.56	+4.1
3,074,654	+		IAI47_14580	0.56	-0.9
3,074,654	+		IAI47_14580	0.56	+0.7
3,074,655	-		IAI47_14580	0.56	-0.9
3,074,655	-		IAI47_14580	0.56	-1.2
3,074,655	-		IAI47_14580	0.56	-0.1
3,074,661	+		IAI47_14580	0.56	-1.2
3,074,661	+		IAI47_14580	0.56	-1.0
3,074,661	+		IAI47_14580	0.56	+0.1
3,074,661	+		IAI47_14580	0.56	-0.4
3,074,661	+		IAI47_14580	0.56	-2.3
3,074,661	+		IAI47_14580	0.56	+0.4
3,074,661	+		IAI47_14580	0.56	-1.1
3,074,662	-		IAI47_14580	0.56	+1.1
3,074,662	-		IAI47_14580	0.56	-2.1
3,074,666	+		IAI47_14580	0.57	+0.6
3,074,667	-		IAI47_14580	0.57	-0.4
3,074,732	+		IAI47_14580	0.62	-1.1
3,074,732	+		IAI47_14580	0.62	-0.1
3,074,736	+		IAI47_14580	0.62	+0.5
3,074,736	+		IAI47_14580	0.62	-0.4
3,074,736	+		IAI47_14580	0.62	+0.5
3,074,737	-		IAI47_14580	0.62	+1.3
3,074,737	-		IAI47_14580	0.62	-1.1
3,074,737	-		IAI47_14580	0.62	+0.9
3,074,737	-		IAI47_14580	0.62	+0.9
3,074,737	-		IAI47_14580	0.62	-0.6
3,074,737	-		IAI47_14580	0.62	+0.8
3,074,737	-		IAI47_14580	0.62	-0.0
3,074,737	-		IAI47_14580	0.62	-1.0
3,074,737	-		IAI47_14580	0.62	+1.4
3,074,740	+		IAI47_14580	0.62	+0.1
3,074,740	+		IAI47_14580	0.62	+0.1
3,074,740	+		IAI47_14580	0.62	-1.5
3,074,740	+		IAI47_14580	0.62	+1.4
3,074,740	+		IAI47_14580	0.62	-1.7
3,074,741	-		IAI47_14580	0.62	-0.5
3,074,741	-		IAI47_14580	0.62	+0.2
3,074,741	-		IAI47_14580	0.62	+0.9
3,074,775	+		IAI47_14580	0.65	+0.4
3,074,792	+		IAI47_14580	0.66	+0.5
3,074,803	-		IAI47_14580	0.67	-1.7
3,074,832	-		IAI47_14580	0.69	+2.7
3,074,832	-		IAI47_14580	0.69	-0.0
3,074,832	-		IAI47_14580	0.69	-0.3
3,074,832	-		IAI47_14580	0.69	+0.9
3,074,832	-		IAI47_14580	0.69	+1.5
3,074,864	+		IAI47_14580	0.72	-0.6
3,074,864	+		IAI47_14580	0.72	+0.8
3,074,865	-		IAI47_14580	0.72	+1.2
3,074,865	-		IAI47_14580	0.72	+1.1
3,074,865	-		IAI47_14580	0.72	-1.2
3,074,865	-		IAI47_14580	0.72	-0.4
3,074,865	-		IAI47_14580	0.72	+2.2
3,074,865	-		IAI47_14580	0.72	+1.0
3,074,865	-		IAI47_14580	0.72	-0.9
3,074,866	+		IAI47_14580	0.72	+0.2
3,074,866	+		IAI47_14580	0.72	-0.3
3,074,866	+		IAI47_14580	0.72	-1.5
3,074,866	+		IAI47_14580	0.72	-0.2
3,074,866	+		IAI47_14580	0.72	+0.6
3,074,866	+		IAI47_14580	0.72	+1.3
3,074,867	-		IAI47_14580	0.72	+1.6
3,074,867	-		IAI47_14580	0.72	+0.2
3,074,867	-		IAI47_14580	0.72	+0.6
3,074,867	-		IAI47_14580	0.72	+0.9
3,074,867	-		IAI47_14580	0.72	-0.7
3,074,867	-		IAI47_14580	0.72	+0.0
3,074,867	-		IAI47_14580	0.72	+0.8
3,074,867	-		IAI47_14580	0.72	-0.3
3,074,867	-		IAI47_14580	0.72	+0.9
3,074,867	-		IAI47_14580	0.72	+0.2
3,074,873	-		IAI47_14580	0.73	+1.1
3,074,873	-		IAI47_14580	0.73	-0.1
3,074,873	-		IAI47_14580	0.73	+0.7
3,074,873	-		IAI47_14580	0.73	-0.3
3,074,873	-		IAI47_14580	0.73	-0.4
3,074,894	+		IAI47_14580	0.74	+1.5
3,074,895	-		IAI47_14580	0.74	+1.0
3,074,975	-		IAI47_14580	0.81	-0.4
3,074,975	-		IAI47_14580	0.81	-0.8
3,074,975	-		IAI47_14580	0.81	+2.6
3,074,989	-		IAI47_14580	0.82	+0.9
3,074,989	-		IAI47_14580	0.82	-0.8
3,075,064	+		IAI47_14580	0.87	+0.5
3,075,064	+		IAI47_14580	0.87	+2.0
3,075,064	+		IAI47_14580	0.87	+0.8
3,075,092	+		IAI47_14580	0.90	+0.4
3,075,093	-		IAI47_14580	0.90	-1.1
3,075,093	-		IAI47_14580	0.90	+0.4
3,075,093	-		IAI47_14580	0.90	+0.2
3,075,093	-		IAI47_14580	0.90	+0.4
3,075,093	-		IAI47_14580	0.90	+0.5
3,075,093	-		IAI47_14580	0.90	+1.0
3,075,122	+				+0.2
3,075,123	-				+0.0
3,075,123	-				+0.2
3,075,177	+				+0.6
3,075,177	+				-0.6
3,075,206	+				+0.7
3,075,206	+				-1.1
3,075,206	+				+1.0
3,075,206	+				+0.3
3,075,206	+				+0.4
3,075,206	+				+0.6
3,075,207	-				+0.3
3,075,207	-				-0.0
3,075,207	-				-1.7
3,075,207	-				+0.8
3,075,210	+				+0.8
3,075,210	+				-1.4
3,075,211	-				+0.7
3,075,218	+				-1.6
3,075,219	-				-0.6
3,075,228	+				+0.4
3,075,228	+				+0.9
3,075,229	-				-0.4
3,075,247	-				-0.8
3,075,247	-				-2.0
3,075,247	-				-2.3
3,075,260	+				+0.0
3,075,260	+				-1.5
3,075,260	+				+0.7
3,075,261	-				-1.0
3,075,261	-				+0.3
3,075,261	-				-0.1
3,075,261	-				+0.6
3,075,261	-				+1.0
3,075,294	+		IAI47_14585	0.10	-0.2
3,075,294	+		IAI47_14585	0.10	-0.5
3,075,294	+		IAI47_14585	0.10	-0.8
3,075,294	+		IAI47_14585	0.10	-0.7
3,075,295	-		IAI47_14585	0.11	+2.4
3,075,296	-		IAI47_14585	0.11	+0.0
3,075,332	-		IAI47_14585	0.22	-1.1
3,075,353	+		IAI47_14585	0.28	+0.0
3,075,353	+		IAI47_14585	0.28	-0.1
3,075,354	-		IAI47_14585	0.28	-0.2
3,075,363	+		IAI47_14585	0.31	-0.0
3,075,363	+		IAI47_14585	0.31	+0.3
3,075,363	+		IAI47_14585	0.31	+0.7
3,075,363	+		IAI47_14585	0.31	+0.9
3,075,364	-		IAI47_14585	0.31	+0.7
3,075,364	-		IAI47_14585	0.31	+1.5
3,075,364	-		IAI47_14585	0.31	+0.9
3,075,412	-		IAI47_14585	0.45	+0.4
3,075,440	-		IAI47_14585	0.53	+0.0
3,075,440	-		IAI47_14585	0.53	+1.5
3,075,446	+		IAI47_14585	0.55	-0.8
3,075,446	+		IAI47_14585	0.55	+0.2
3,075,446	+		IAI47_14585	0.55	+0.8
3,075,446	+		IAI47_14585	0.55	-1.8
3,075,446	+		IAI47_14585	0.55	-1.6
3,075,446	+		IAI47_14585	0.55	+0.7
3,075,447	-		IAI47_14585	0.55	+1.5
3,075,447	-		IAI47_14585	0.55	+1.0
3,075,462	-		IAI47_14585	0.60	+1.4
3,075,531	+		IAI47_14585	0.80	+0.2
3,075,538	+		IAI47_14585	0.82	+1.2
3,075,550	+		IAI47_14585	0.86	-1.6
3,075,550	+		IAI47_14585	0.86	+0.8
3,075,550	+		IAI47_14585	0.86	+0.5
3,075,551	-		IAI47_14585	0.86	+1.6
3,075,551	-		IAI47_14585	0.86	-0.2
3,075,551	-		IAI47_14585	0.86	+1.8
3,075,551	-		IAI47_14585	0.86	-0.2
3,075,551	-		IAI47_14585	0.86	+1.4
3,075,573	+				-0.0
3,075,573	+				+0.4
3,075,573	+				+0.6
3,075,574	-				+0.3
3,075,574	-				-0.2
3,075,574	-				+0.9
3,075,574	-				-1.2
3,075,577	+				-1.1
3,075,577	+				+1.7
3,075,578	-				-1.1
3,075,578	-				-0.4
3,075,616	+				+2.3
3,075,617	-				-1.0
3,075,617	-				+0.0
3,075,632	-				+0.7
3,075,648	-				+1.4
3,075,649	+				+1.2
3,075,649	+				+0.5
3,075,649	+				-1.3
3,075,649	+				+0.2
3,075,649	+				+0.3
3,075,650	-				-0.3
3,075,650	-				-0.8
3,075,650	-				-1.3
3,075,688	-				-0.7
3,075,724	-				+0.4
3,075,730	-				+1.1
3,075,761	+				-1.6
3,075,761	+				-0.0
3,075,762	-				+1.4
3,075,791	+				-2.5
3,075,792	-				+0.6
3,075,792	-				+0.2
3,075,816	-				+0.1
3,075,816	-				+0.5
3,075,822	+				+1.0
3,075,822	+				-0.6
3,075,822	+				+0.9
3,075,822	+				+0.2
3,075,823	-				+0.1
3,075,830	+				-0.6
3,075,870	+				-2.7
3,075,870	+				-0.5
3,075,871	-				-1.0
3,075,871	-				+0.2
3,075,871	-				+0.1
3,075,909	+				-0.1
3,075,910	-				-1.9
3,075,910	-				-2.8
3,075,910	-				+0.6
3,075,910	-				+0.4
3,075,916	+				-1.6
3,075,916	+				-0.1
3,075,916	+				+1.1
3,075,916	+				-2.7
3,075,916	+				-0.8
3,075,916	+				-2.0
3,075,916	+				-1.8
3,075,916	+				+0.2
3,075,916	+				-0.4
3,075,917	-				-2.2
3,075,917	-				-1.2
3,075,917	-				-1.8
3,075,917	-				-1.4
3,075,917	-				-0.7
3,075,962	+				+0.8
3,076,026	+				-0.4
3,076,027	-				+0.3
3,076,027	-				+1.4
3,076,052	+		IAI47_14590	0.11	-2.0
3,076,052	+		IAI47_14590	0.11	-1.7
3,076,052	+		IAI47_14590	0.11	-2.3
3,076,052	+		IAI47_14590	0.11	-0.4
3,076,053	-		IAI47_14590	0.11	-1.8
3,076,053	-		IAI47_14590	0.11	-1.1
3,076,053	-		IAI47_14590	0.11	-2.6
3,076,136	+		IAI47_14590	0.16	-1.0
3,076,136	+		IAI47_14590	0.16	-0.1
3,076,136	+		IAI47_14590	0.16	-0.3
3,076,137	-		IAI47_14590	0.16	-1.5
3,076,137	-		IAI47_14590	0.16	-0.8
3,076,137	-		IAI47_14590	0.16	-1.1
3,076,137	-		IAI47_14590	0.16	-1.6
3,076,140	+		IAI47_14590	0.16	-0.5
3,076,140	+		IAI47_14590	0.16	-0.0
3,076,140	+		IAI47_14590	0.16	-2.2
3,076,140	+		IAI47_14590	0.16	-0.6
3,076,140	+		IAI47_14590	0.16	+0.4
3,076,140	+		IAI47_14590	0.16	-0.3
3,076,140	+		IAI47_14590	0.16	-0.6
3,076,141	-		IAI47_14590	0.16	-1.1
3,076,141	-		IAI47_14590	0.16	-1.5
3,076,141	-		IAI47_14590	0.16	-0.8
3,076,141	-		IAI47_14590	0.16	-0.6
3,076,141	-		IAI47_14590	0.16	-1.3
3,076,141	-		IAI47_14590	0.16	-3.1
3,076,141	-		IAI47_14590	0.16	-3.0
3,076,141	-		IAI47_14590	0.16	+0.2
3,076,205	+		IAI47_14590	0.20	-0.3
3,076,205	+		IAI47_14590	0.20	+0.6
3,076,205	+		IAI47_14590	0.20	-0.3
3,076,205	+		IAI47_14590	0.20	-3.0
3,076,205	+		IAI47_14590	0.20	-1.0
3,076,272	+		IAI47_14590	0.23	-1.9
3,076,272	+		IAI47_14590	0.23	-0.8
3,076,272	+		IAI47_14590	0.23	-1.8
3,076,273	-		IAI47_14590	0.24	-0.8
3,076,353	+		IAI47_14590	0.28	-1.6
3,076,382	+		IAI47_14590	0.30	-0.7
3,076,418	+		IAI47_14590	0.32	+1.6
3,076,418	+		IAI47_14590	0.32	-0.3
3,076,418	+		IAI47_14590	0.32	-1.0
3,076,419	-		IAI47_14590	0.32	-1.4
3,076,460	-		IAI47_14590	0.34	-2.7
3,076,460	-		IAI47_14590	0.34	-1.6
3,076,462	+		IAI47_14590	0.34	-1.7
3,076,462	+		IAI47_14590	0.34	-1.6
3,076,463	-		IAI47_14590	0.34	-0.5
3,076,463	-		IAI47_14590	0.34	-1.4
3,076,487	+		IAI47_14590	0.36	-1.9
3,076,487	+		IAI47_14590	0.36	-1.7
3,076,487	+		IAI47_14590	0.36	-1.5
3,076,487	+		IAI47_14590	0.36	-1.9
3,076,488	-		IAI47_14590	0.36	-0.1
3,076,488	-		IAI47_14590	0.36	+1.3
3,076,488	-		IAI47_14590	0.36	-0.0
3,076,488	-		IAI47_14590	0.36	+1.0
3,076,506	-		IAI47_14590	0.37	+0.7
3,076,553	+		IAI47_14590	0.39	-2.2
3,076,553	+		IAI47_14590	0.39	-0.6
3,076,563	+		IAI47_14590	0.40	-1.3
3,076,563	+		IAI47_14590	0.40	-0.2