Strain Fitness in Pantoea sp. MT58 around IAI47_08470

Experiment: Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
1,791,227	+				-1.6
1,791,227	+				+0.8
1,791,227	+				+0.4
1,791,228	-				+0.6
1,791,228	-				+1.4
1,791,228	-				+1.1
1,791,228	-				+1.2
1,791,232	+				+0.8
1,791,232	+				+0.7
1,791,232	+				-0.7
1,791,232	+				+0.1
1,791,233	-				+1.4
1,791,239	+				-1.0
1,791,240	-				+2.4
1,791,271	+				-0.7
1,791,271	+				-0.7
1,791,271	+				+0.2
1,791,272	-				+1.3
1,791,286	+				-1.1
1,791,286	+				-0.4
1,791,286	+				+0.1
1,791,341	+		IAI47_08465	0.12	+0.6
1,791,341	+		IAI47_08465	0.12	+1.0
1,791,342	-		IAI47_08465	0.12	+1.8
1,791,460	+		IAI47_08465	0.24	-0.9
1,791,460	+		IAI47_08465	0.24	-0.6
1,791,460	+		IAI47_08465	0.24	-1.0
1,791,460	+		IAI47_08465	0.24	+0.3
1,791,461	-		IAI47_08465	0.25	+0.0
1,791,494	+		IAI47_08465	0.28	+0.4
1,791,568	+		IAI47_08465	0.36	+0.1
1,791,573	-		IAI47_08465	0.36	+1.4
1,791,662	+		IAI47_08465	0.46	+0.1
1,791,663	-		IAI47_08465	0.46	+0.8
1,791,665	+		IAI47_08465	0.46	+0.3
1,791,665	+		IAI47_08465	0.46	-0.4
1,791,665	+		IAI47_08465	0.46	+1.2
1,791,666	-		IAI47_08465	0.46	-1.6
1,791,666	-		IAI47_08465	0.46	-0.9
1,791,666	-		IAI47_08465	0.46	+0.6
1,791,666	-		IAI47_08465	0.46	+0.2
1,791,666	-		IAI47_08465	0.46	-0.6
1,791,666	-		IAI47_08465	0.46	+1.6
1,791,727	+		IAI47_08465	0.53	-0.2
1,791,737	+		IAI47_08465	0.54	-0.4
1,791,738	-		IAI47_08465	0.54	+1.6
1,791,750	-		IAI47_08465	0.55	+0.6
1,791,787	+		IAI47_08465	0.59	+0.2
1,791,787	+		IAI47_08465	0.59	+0.5
1,791,842	+		IAI47_08465	0.65	+0.2
1,791,842	+		IAI47_08465	0.65	-0.9
1,791,843	-		IAI47_08465	0.65	-0.4
1,791,849	+		IAI47_08465	0.66	+0.8
1,791,850	-		IAI47_08465	0.66	+1.0
1,791,850	-		IAI47_08465	0.66	+1.0
1,791,850	-		IAI47_08465	0.66	+2.3
1,791,870	+		IAI47_08465	0.68	-0.2
1,791,870	+		IAI47_08465	0.68	+2.4
1,791,870	+		IAI47_08465	0.68	+0.4
1,791,870	+		IAI47_08465	0.68	+1.0
1,791,871	-		IAI47_08465	0.68	-0.1
1,791,871	-		IAI47_08465	0.68	+0.8
1,791,876	+		IAI47_08465	0.68	+1.0
1,791,876	+		IAI47_08465	0.68	+0.7
1,791,877	-		IAI47_08465	0.68	+0.6
1,791,877	-		IAI47_08465	0.68	+0.8
1,791,877	-		IAI47_08465	0.68	+1.3
1,791,891	+		IAI47_08465	0.70	+0.5
1,791,891	+		IAI47_08465	0.70	+0.8
1,791,892	-		IAI47_08465	0.70	-0.2
1,791,917	+		IAI47_08465	0.73	+0.1
1,791,917	+		IAI47_08465	0.73	+2.6
1,791,955	+		IAI47_08465	0.77	+1.4
1,791,964	+		IAI47_08465	0.78	+1.1
1,792,102	+				-0.1
1,792,102	+				+0.8
1,792,102	+				+0.4
1,792,103	-				+0.2
1,792,116	+				+0.4
1,792,116	+				-1.7
1,792,116	+				+1.8
1,792,116	+				+0.4
1,792,116	+				+1.9
1,792,116	+				+2.4
1,792,117	-				+2.0
1,792,117	-				+1.6
1,792,117	-				+0.3
1,792,117	-				+0.0
1,792,149	+				+0.5
1,792,180	+				-0.7
1,792,180	+				+0.8
1,792,180	+				-0.0
1,792,180	+				+1.3
1,792,184	+				+1.3
1,792,185	-				+2.0
1,792,185	-				-0.6
1,792,200	-				-0.7
1,792,200	-				+2.0
1,792,224	+				+1.0
1,792,224	+				-0.7
1,792,227	+				+1.9
1,792,250	+				+1.0
1,792,251	-				-0.2
1,792,303	+				+1.5
1,792,304	-				+0.9
1,792,309	+				+0.9
1,792,310	-				+1.0
1,792,342	-		IAI47_08470	0.11	+0.8
1,792,342	-		IAI47_08470	0.11	+1.4
1,792,359	+		IAI47_08470	0.13	+2.4
1,792,360	-		IAI47_08470	0.13	-1.0
1,792,360	-		IAI47_08470	0.13	+1.3
1,792,489	+		IAI47_08470	0.23	+0.4
1,792,490	-		IAI47_08470	0.23	-0.7
1,792,534	+		IAI47_08470	0.26	+0.4
1,792,558	-		IAI47_08470	0.28	+1.4
1,792,571	+		IAI47_08470	0.29	+1.0
1,792,590	+		IAI47_08470	0.30	+1.4
1,792,591	-		IAI47_08470	0.30	+0.7
1,792,687	+		IAI47_08470	0.37	+0.7
1,792,687	+		IAI47_08470	0.37	-0.0
1,792,687	+		IAI47_08470	0.37	+1.7
1,792,688	-		IAI47_08470	0.37	+1.8
1,792,688	-		IAI47_08470	0.37	+0.4
1,792,688	-		IAI47_08470	0.37	-1.6
1,792,688	-		IAI47_08470	0.37	+1.1
1,792,688	-		IAI47_08470	0.37	+0.3
1,792,714	-		IAI47_08470	0.39	+1.5
1,792,714	-		IAI47_08470	0.39	+1.2
1,792,757	+		IAI47_08470	0.43	+1.0
1,792,757	+		IAI47_08470	0.43	-1.0
1,792,757	+		IAI47_08470	0.43	+1.0
1,792,758	-		IAI47_08470	0.43	+1.7
1,792,758	-		IAI47_08470	0.43	+1.2
1,792,758	-		IAI47_08470	0.43	+1.5
1,792,926	+		IAI47_08470	0.55	+0.7
1,792,927	-		IAI47_08470	0.55	+1.9
1,792,927	-		IAI47_08470	0.55	+1.8
1,792,927	-		IAI47_08470	0.55	+1.2
1,792,965	+		IAI47_08470	0.58	+1.6
1,792,966	-		IAI47_08470	0.58	+1.2
1,792,981	+		IAI47_08470	0.59	+1.8
1,792,981	+		IAI47_08470	0.59	+0.4
1,792,981	+		IAI47_08470	0.59	+1.0
1,792,982	-		IAI47_08470	0.60	+0.1
1,792,982	-		IAI47_08470	0.60	+1.1
1,792,984	+		IAI47_08470	0.60	+0.8
1,792,984	+		IAI47_08470	0.60	+0.3
1,792,984	+		IAI47_08470	0.60	+1.6
1,792,985	-		IAI47_08470	0.60	+0.4
1,793,014	+		IAI47_08470	0.62	+1.2
1,793,014	+		IAI47_08470	0.62	+0.6
1,793,049	+		IAI47_08470	0.65	-0.0
1,793,067	+		IAI47_08470	0.66	+0.9
1,793,067	+		IAI47_08470	0.66	-0.2
1,793,095	-		IAI47_08470	0.68	+2.4
1,793,109	+		IAI47_08470	0.69	+1.2
1,793,109	+		IAI47_08470	0.69	+1.3
1,793,109	+		IAI47_08470	0.69	+1.7
1,793,140	-		IAI47_08470	0.71	+1.0
1,793,169	+		IAI47_08470	0.74	+0.8
1,793,236	+		IAI47_08470	0.79	+0.8
1,793,236	+		IAI47_08470	0.79	-1.7
1,793,236	+		IAI47_08470	0.79	-0.3
1,793,236	+		IAI47_08470	0.79	+1.6
1,793,236	+		IAI47_08470	0.79	-0.4
1,793,236	+		IAI47_08470	0.79	+0.5
1,793,236	+		IAI47_08470	0.79	+0.4
1,793,236	+		IAI47_08470	0.79	+1.0
1,793,236	+		IAI47_08470	0.79	-0.9
1,793,236	+		IAI47_08470	0.79	+1.0
1,793,236	+		IAI47_08470	0.79	+1.5
1,793,236	+		IAI47_08470	0.79	+2.4
1,793,236	+		IAI47_08470	0.79	+1.0
1,793,236	+		IAI47_08470	0.79	+0.7
1,793,236	+		IAI47_08470	0.79	+1.7
1,793,236	+		IAI47_08470	0.79	-0.2
1,793,236	+		IAI47_08470	0.79	-0.6
1,793,236	+		IAI47_08470	0.79	+2.3
1,793,236	+		IAI47_08470	0.79	+1.1
1,793,236	+		IAI47_08470	0.79	+1.5
1,793,237	-		IAI47_08470	0.79	+0.5
1,793,237	-		IAI47_08470	0.79	+0.7
1,793,237	-		IAI47_08470	0.79	-0.3
1,793,237	-		IAI47_08470	0.79	-0.2
1,793,237	-		IAI47_08470	0.79	+0.6
1,793,237	-		IAI47_08470	0.79	+1.6
1,793,237	-		IAI47_08470	0.79	+1.8
1,793,237	-		IAI47_08470	0.79	-0.2
1,793,237	-		IAI47_08470	0.79	-0.0
1,793,240	+		IAI47_08470	0.79	-1.4
1,793,240	+		IAI47_08470	0.79	+1.1
1,793,240	+		IAI47_08470	0.79	-0.1
1,793,240	+		IAI47_08470	0.79	+1.1
1,793,240	+		IAI47_08470	0.79	+2.3
1,793,240	+		IAI47_08470	0.79	-0.3
1,793,240	+		IAI47_08470	0.79	+0.8
1,793,241	-		IAI47_08470	0.79	+0.5
1,793,241	-		IAI47_08470	0.79	+1.3
1,793,241	-		IAI47_08470	0.79	+0.2
1,793,241	-		IAI47_08470	0.79	+1.7
1,793,241	-		IAI47_08470	0.79	+0.3
1,793,241	-		IAI47_08470	0.79	+0.5
1,793,241	-		IAI47_08470	0.79	+1.6
1,793,241	-		IAI47_08470	0.79	+0.5
1,793,241	-		IAI47_08470	0.79	+0.3
1,793,241	-		IAI47_08470	0.79	-1.0
1,793,241	-		IAI47_08470	0.79	+1.3
1,793,241	-		IAI47_08470	0.79	+0.5
1,793,241	-		IAI47_08470	0.79	-0.9
1,793,244	+		IAI47_08470	0.79	+0.8
1,793,245	-		IAI47_08470	0.79	+1.1
1,793,263	+		IAI47_08470	0.81	+0.4
1,793,263	+		IAI47_08470	0.81	+1.0
1,793,263	+		IAI47_08470	0.81	+1.0
1,793,263	+		IAI47_08470	0.81	-0.9
1,793,263	+		IAI47_08470	0.81	-0.5
1,793,264	-		IAI47_08470	0.81	-0.7
1,793,264	-		IAI47_08470	0.81	-2.0
1,793,264	-		IAI47_08470	0.81	-0.3
1,793,264	-		IAI47_08470	0.81	+2.1
1,793,264	-		IAI47_08470	0.81	-0.9
1,793,265	+		IAI47_08470	0.81	+1.9
1,793,265	+		IAI47_08470	0.81	+0.1
1,793,265	+		IAI47_08470	0.81	+1.2
1,793,265	+		IAI47_08470	0.81	+2.1
1,793,266	-		IAI47_08470	0.81	+1.8
1,793,266	-		IAI47_08470	0.81	+3.0
1,793,266	-		IAI47_08470	0.81	+2.4
1,793,266	-		IAI47_08470	0.81	+1.1
1,793,266	-		IAI47_08470	0.81	-0.2
1,793,275	+		IAI47_08470	0.82	+1.7
1,793,275	+		IAI47_08470	0.82	-0.3
1,793,276	-		IAI47_08470	0.82	-0.1
1,793,276	-		IAI47_08470	0.82	-0.7
1,793,276	-		IAI47_08470	0.82	-0.3
1,793,276	-		IAI47_08470	0.82	+1.1
1,793,276	-		IAI47_08470	0.82	+0.9
1,793,276	-		IAI47_08470	0.82	+0.5
1,793,277	+		IAI47_08470	0.82	+1.4
1,793,277	+		IAI47_08470	0.82	+2.4
1,793,277	+		IAI47_08470	0.82	+1.5
1,793,277	+		IAI47_08470	0.82	+1.0
1,793,278	-		IAI47_08470	0.82	+0.7
1,793,278	-		IAI47_08470	0.82	+0.4
1,793,278	-		IAI47_08470	0.82	+1.6
1,793,278	-		IAI47_08470	0.82	+0.1
1,793,278	-		IAI47_08470	0.82	+0.7
1,793,278	-		IAI47_08470	0.82	+0.7
1,793,278	-		IAI47_08470	0.82	+0.6
1,793,334	+		IAI47_08470	0.86	+1.0
1,793,350	-		IAI47_08470	0.87	+1.1
1,793,473	+				-0.4
1,793,473	+				-0.7
1,793,473	+				-3.4
1,793,473	+				-4.2
1,793,473	+				-3.0
1,793,473	+				-1.7
1,793,473	+				-4.5
1,793,474	-				-2.0
1,793,474	-				-0.5
1,793,474	-				-2.3
1,793,474	-				-1.2
1,793,474	-				-1.7
1,793,475	+				+1.1
1,793,475	+				-0.6
1,793,475	+				+1.3
1,793,475	+				-0.9
1,793,475	+				-2.3
1,793,475	+				-0.4
1,793,476	-				-1.0
1,793,575	-				+0.3
1,793,613	+				-0.4
1,793,618	+				-0.6
1,793,618	+				+0.0
1,793,618	+				+0.8