Strain Fitness in Pantoea sp. MT58 around IAI47_15675

Experiment: Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50
3,304,418	+		IAI47_15670	0.43	+0.4
3,304,419	-		IAI47_15670	0.44	-0.3
3,304,422	+		IAI47_15670	0.44	+0.0
3,304,422	+		IAI47_15670	0.44	-1.2
3,304,423	-		IAI47_15670	0.44	+2.0
3,304,423	-		IAI47_15670	0.44	-0.0
3,304,434	+		IAI47_15670	0.45	+0.2
3,304,435	-		IAI47_15670	0.45	+0.2
3,304,435	-		IAI47_15670	0.45	+0.5
3,304,435	-		IAI47_15670	0.45	-0.0
3,304,452	+		IAI47_15670	0.47	-0.1
3,304,453	-		IAI47_15670	0.47	+0.0
3,304,474	+		IAI47_15670	0.49	-0.6
3,304,474	+		IAI47_15670	0.49	-1.5
3,304,475	-		IAI47_15670	0.49	-0.1
3,304,475	-		IAI47_15670	0.49	+0.2
3,304,537	+		IAI47_15670	0.55	-0.1
3,304,537	+		IAI47_15670	0.55	+2.6
3,304,537	+		IAI47_15670	0.55	+0.2
3,304,538	-		IAI47_15670	0.55	+0.1
3,304,538	-		IAI47_15670	0.55	+0.4
3,304,538	-		IAI47_15670	0.55	+0.0
3,304,600	+		IAI47_15670	0.61	+0.5
3,304,628	-		IAI47_15670	0.64	+1.5
3,304,657	+		IAI47_15670	0.67	-1.1
3,304,658	-		IAI47_15670	0.67	+0.1
3,304,658	-		IAI47_15670	0.67	+1.0
3,304,658	-		IAI47_15670	0.67	-0.3
3,304,682	-		IAI47_15670	0.70	-1.8
3,304,685	-		IAI47_15670	0.70	+0.2
3,304,685	-		IAI47_15670	0.70	-0.0
3,304,709	+		IAI47_15670	0.72	+0.2
3,304,719	+		IAI47_15670	0.73	+1.6
3,304,719	+		IAI47_15670	0.73	+0.2
3,304,747	-		IAI47_15670	0.76	+0.7
3,304,753	+		IAI47_15670	0.77	-1.6
3,304,754	-		IAI47_15670	0.77	-1.1
3,304,754	-		IAI47_15670	0.77	+0.7
3,304,754	-		IAI47_15670	0.77	+0.1
3,304,760	+		IAI47_15670	0.77	-1.1
3,304,760	+		IAI47_15670	0.77	-0.8
3,304,761	-		IAI47_15670	0.77	+0.6
3,304,761	-		IAI47_15670	0.77	-0.3
3,304,769	-		IAI47_15670	0.78	+0.1
3,304,772	-		IAI47_15670	0.78	+0.9
3,304,814	+		IAI47_15670	0.83	+0.9
3,304,906	+				+0.1
3,304,906	+				+2.0
3,304,906	+				-0.3
3,304,906	+				+0.6
3,304,906	+				+0.4
3,304,907	-				-0.5
3,304,910	+				-1.5
3,304,910	+				-0.4
3,304,911	-				+0.4
3,304,949	-				+1.3
3,304,949	-				-0.0
3,304,949	-				-1.8
3,304,952	+				+1.0
3,304,952	+				+0.3
3,304,953	-				+0.0
3,304,953	-				+0.3
3,304,966	+				-1.9
3,304,979	+				-0.7
3,304,979	+				-1.6
3,304,980	-				+0.5
3,304,982	-				+0.0
3,305,005	+				-0.3
3,305,043	-				+0.8
3,305,088	+				-1.6
3,305,095	-				+0.4
3,305,095	-				-1.3
3,305,113	+				-0.1
3,305,114	-				-1.0
3,305,120	+				+0.4
3,305,128	+				-0.1
3,305,146	+				+1.1
3,305,147	-				-0.3
3,305,177	-				+1.8
3,305,186	+				+2.0
3,305,192	-				-0.2
3,305,209	+				-0.2
3,305,212	+				+0.3
3,305,213	-				-0.1
3,305,213	-				-0.1
3,305,213	-				-1.6
3,305,219	+				+1.0
3,305,222	+				-0.6
3,305,222	+				+0.3
3,305,222	+				-0.3
3,305,222	+				-0.2
3,305,222	+				-1.1
3,305,222	+				+0.2
3,305,223	-				+0.1
3,305,223	-				-0.1
3,305,223	-				-1.3
3,305,226	+				-0.5
3,305,226	+				+0.5
3,305,226	+				-0.5
3,305,227	-				+0.8
3,305,227	-				+1.6
3,305,253	+				+1.1
3,305,253	+				+0.8
3,305,253	+				+0.2
3,305,253	+				-1.8
3,305,254	-				-0.7
3,305,254	-				-0.2
3,305,283	+				-2.4
3,305,283	+				+0.5
3,305,284	-				-1.3
3,305,284	-				+0.4
3,305,284	-				-1.6
3,305,284	-				+1.8
3,305,319	+				+0.7
3,305,341	+				+0.6
3,305,341	+				+2.3
3,305,342	-				-0.1
3,305,398	-				+0.1
3,305,398	-				+0.0
3,305,423	+				+0.9
3,305,424	-				-0.2
3,305,424	-				+1.9
3,305,424	-				-0.1
3,305,441	+				-0.3
3,305,451	+				+0.7
3,305,451	+				+1.2
3,305,451	+				-0.4
3,305,452	-				+0.3
3,305,452	-				+1.7
3,305,452	-				-0.9
3,305,463	+				-1.8
3,305,464	-				+2.2
3,305,464	-				+0.9
3,305,464	-				-0.7
3,305,476	+				-2.3
3,305,476	+				-0.9
3,305,477	-				-1.6
3,305,477	-				+0.3
3,305,489	+				-3.0
3,305,490	-				+0.5
3,305,490	-				+1.0
3,305,500	+		IAI47_15675	0.11	-0.7
3,305,501	-		IAI47_15675	0.11	+0.5
3,305,501	-		IAI47_15675	0.11	+0.4
3,305,521	+		IAI47_15675	0.14	+0.2
3,305,521	+		IAI47_15675	0.14	-0.8
3,305,557	+		IAI47_15675	0.19	-0.3
3,305,557	+		IAI47_15675	0.19	+0.1
3,305,557	+		IAI47_15675	0.19	-2.4
3,305,558	-		IAI47_15675	0.19	-0.4
3,305,558	-		IAI47_15675	0.19	-0.0
3,305,558	-		IAI47_15675	0.19	-1.5
3,305,558	-		IAI47_15675	0.19	+0.2
3,305,559	+		IAI47_15675	0.19	+0.1
3,305,559	+		IAI47_15675	0.19	+1.2
3,305,559	+		IAI47_15675	0.19	+1.1
3,305,559	+		IAI47_15675	0.19	-1.2
3,305,559	+		IAI47_15675	0.19	+0.8
3,305,559	+		IAI47_15675	0.19	-0.2
3,305,559	+		IAI47_15675	0.19	+0.2
3,305,560	-		IAI47_15675	0.19	-1.2
3,305,560	-		IAI47_15675	0.19	-1.1
3,305,619	+		IAI47_15675	0.27	-0.2
3,305,620	-		IAI47_15675	0.27	+0.6
3,305,620	-		IAI47_15675	0.27	-1.5
3,305,624	+		IAI47_15675	0.27	+0.7
3,305,624	+		IAI47_15675	0.27	-0.5
3,305,624	+		IAI47_15675	0.27	-0.0
3,305,624	+		IAI47_15675	0.27	+1.3
3,305,624	+		IAI47_15675	0.27	+2.2
3,305,625	-		IAI47_15675	0.27	-0.4
3,305,625	-		IAI47_15675	0.27	-0.4
3,305,625	-		IAI47_15675	0.27	+0.4
3,305,637	+		IAI47_15675	0.29	+0.0
3,305,637	+		IAI47_15675	0.29	-0.8
3,305,637	+		IAI47_15675	0.29	-1.5
3,305,677	+		IAI47_15675	0.34	-0.7
3,305,844	-		IAI47_15675	0.56	+0.8
3,305,859	+		IAI47_15675	0.58	+0.7
3,305,860	-		IAI47_15675	0.58	-0.3
3,305,860	-		IAI47_15675	0.58	-0.4
3,305,869	+		IAI47_15675	0.59	+1.2
3,305,870	-		IAI47_15675	0.59	+0.8
3,305,870	-		IAI47_15675	0.59	+0.3
3,305,870	-		IAI47_15675	0.59	-0.1
3,305,872	+		IAI47_15675	0.59	+1.4
3,305,872	+		IAI47_15675	0.59	-1.1
3,305,872	+		IAI47_15675	0.59	-0.7
3,305,872	+		IAI47_15675	0.59	-2.5
3,305,872	+		IAI47_15675	0.59	+1.0
3,305,872	+		IAI47_15675	0.59	+1.4
3,305,872	+		IAI47_15675	0.59	-1.2
3,305,872	+		IAI47_15675	0.59	+0.9
3,305,873	-		IAI47_15675	0.60	-0.3
3,305,873	-		IAI47_15675	0.60	-0.1
3,305,873	-		IAI47_15675	0.60	-0.6
3,305,873	-		IAI47_15675	0.60	+0.5
3,305,873	-		IAI47_15675	0.60	-0.3
3,305,958	+		IAI47_15675	0.71	-1.7
3,305,959	-		IAI47_15675	0.71	+0.0
3,306,010	+		IAI47_15675	0.77	+1.2
3,306,010	+		IAI47_15675	0.77	-1.1
3,306,011	-		IAI47_15675	0.77	-1.5
3,306,011	-		IAI47_15675	0.77	+0.1
3,306,011	-		IAI47_15675	0.77	+0.4
3,306,012	+		IAI47_15675	0.78	+0.6
3,306,012	+		IAI47_15675	0.78	+0.6
3,306,012	+		IAI47_15675	0.78	+0.8
3,306,012	+		IAI47_15675	0.78	+0.2
3,306,012	+		IAI47_15675	0.78	-0.1
3,306,012	+		IAI47_15675	0.78	+2.0
3,306,012	+		IAI47_15675	0.78	-0.7
3,306,012	+		IAI47_15675	0.78	+0.9
3,306,012	+		IAI47_15675	0.78	+0.2
3,306,012	+		IAI47_15675	0.78	-0.5
3,306,012	+		IAI47_15675	0.78	-0.1
3,306,013	-		IAI47_15675	0.78	-0.5
3,306,013	-		IAI47_15675	0.78	+1.1
3,306,013	-		IAI47_15675	0.78	-0.5
3,306,013	-		IAI47_15675	0.78	+0.6
3,306,013	-		IAI47_15675	0.78	+0.0
3,306,013	-		IAI47_15675	0.78	-1.4
3,306,013	-		IAI47_15675	0.78	-0.2
3,306,013	-		IAI47_15675	0.78	+0.6
3,306,013	-		IAI47_15675	0.78	-1.0
3,306,013	-		IAI47_15675	0.78	+0.8
3,306,072	+		IAI47_15675	0.85	-1.0
3,306,072	+		IAI47_15675	0.85	-1.4
3,306,073	-		IAI47_15675	0.85	+0.7
3,306,073	-		IAI47_15675	0.85	-0.4
3,306,073	-		IAI47_15675	0.85	+0.4
3,306,151	+				+0.6
3,306,151	+				+0.9
3,306,171	+				+0.3
3,306,250	-				-0.7
3,306,258	+				+0.4
3,306,259	-				-1.2
3,306,259	-				+1.8
3,306,259	-				-0.2
3,306,294	+		IAI47_15680	0.12	+0.8
3,306,294	+		IAI47_15680	0.12	-0.8
3,306,486	+		IAI47_15680	0.33	-1.3
3,306,527	+		IAI47_15680	0.37	-1.2
3,306,527	+		IAI47_15680	0.37	+0.2
3,306,527	+		IAI47_15680	0.37	+0.6
3,306,527	+		IAI47_15680	0.37	-0.2
3,306,527	+		IAI47_15680	0.37	-0.8
3,306,528	-		IAI47_15680	0.37	+1.2
3,306,528	-		IAI47_15680	0.37	+1.0
3,306,528	-		IAI47_15680	0.37	+0.2
3,306,565	-		IAI47_15680	0.41	+2.3
3,306,607	-		IAI47_15680	0.46	-0.8
3,306,645	+		IAI47_15680	0.50	+0.7
3,306,646	-		IAI47_15680	0.50	+2.6
3,306,752	+		IAI47_15680	0.61	+1.2
3,306,753	-		IAI47_15680	0.62	-0.9
3,306,753	-		IAI47_15680	0.62	+0.7
3,306,798	-		IAI47_15680	0.66	-0.9
3,306,798	-		IAI47_15680	0.66	+0.5
3,306,798	-		IAI47_15680	0.66	-1.3
3,306,849	+		IAI47_15680	0.72	-0.5
3,306,850	-		IAI47_15680	0.72	-2.9
3,306,850	-		IAI47_15680	0.72	-0.4
3,306,912	-		IAI47_15680	0.79	+0.2
3,306,942	+		IAI47_15680	0.82	-1.5
3,306,942	+		IAI47_15680	0.82	-0.1
3,306,942	+		IAI47_15680	0.82	+0.2
3,306,943	-		IAI47_15680	0.82	+0.1
3,306,943	-		IAI47_15680	0.82	-0.2
3,306,943	-		IAI47_15680	0.82	+0.7
3,306,943	-		IAI47_15680	0.82	+0.4
3,306,945	+		IAI47_15680	0.82	+0.5
3,306,945	+		IAI47_15680	0.82	+0.2
3,306,946	-		IAI47_15680	0.82	-0.2
3,306,960	+		IAI47_15680	0.84	+0.7
3,306,961	-		IAI47_15680	0.84	+1.5
3,307,010	+		IAI47_15680	0.89	-0.6
3,307,010	+		IAI47_15680	0.89	-0.2
3,307,010	+		IAI47_15680	0.89	-1.0
3,307,010	+		IAI47_15680	0.89	-1.2
3,307,011	-		IAI47_15680	0.89	-2.9
3,307,011	-		IAI47_15680	0.89	+0.6
3,307,032	+				+1.2
3,307,070	+				-0.4
3,307,103	+				-0.9
3,307,103	+				+0.3
3,307,103	+				-1.2
3,307,103	+				+0.4
3,307,103	+				+0.3
3,307,104	-				-2.4
3,307,104	-				+1.0
3,307,104	-				+1.5
3,307,104	-				+0.7
3,307,159	-				-0.5
3,307,173	+				+0.5
3,307,173	+				+0.4
3,307,173	+				+0.8
3,307,173	+				+1.5
3,307,173	+				+0.9
3,307,173	+				+0.4
3,307,173	+				+2.3
3,307,174	-				+0.7
3,307,174	-				+1.5
3,307,174	-				+0.0
3,307,174	-				-0.6
3,307,174	-				+2.6
3,307,174	-				+1.0
3,307,174	-				-1.3
3,307,174	-				-0.3
3,307,175	+				-0.2
3,307,175	+				+0.0
3,307,175	+				-1.0
3,307,175	+				+2.0
3,307,175	+				+1.6
3,307,175	+				+3.2
3,307,175	+				-0.4
3,307,175	+				+0.1
3,307,175	+				+0.6
3,307,175	+				+0.7
3,307,175	+				-0.2
3,307,175	+				-0.1
3,307,176	-				-0.3
3,307,176	-				+0.7
3,307,176	-				-0.7
3,307,176	-				-0.8
3,307,176	-				-0.1
3,307,176	-				+0.8
3,307,176	-				+1.2
3,307,176	-				-0.7
3,307,176	-				+2.2
3,307,176	-				+0.2
3,307,176	-				-0.9
3,307,176	-				-0.3
3,307,176	-				+0.2
3,307,176	-				+1.2
3,307,176	-				-0.3
3,307,176	-				+0.6
3,307,176	-				-0.1
3,307,176	-				+1.4
3,307,176	-				+0.8
3,307,176	-				-1.3
3,307,176	-				-1.6
3,307,176	-				+0.3
3,307,178	+				+0.1
3,307,178	+				+2.3
3,307,178	+				-1.0
3,307,179	-				-0.4
3,307,179	-				+1.7
3,307,179	-				-0.7
3,307,179	-				-0.1